RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 GPBP1L1Q9HC44 474 aaPredicted RBP10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 MTRF1LQ9UGC7 380 aaKnown RBP10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 PHLPP2Q6ZVD8 1323 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 GAS8O95995 478 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 MYL3P08590 195 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 SFNP31947 248 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 CALCOCO2Q13137 446 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 TUBB2AQ13885 445 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 ZNF658Q5TYW1 1059 aaPredicted RBP10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 LDHDQ86WU2 507 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 P2RX5Q93086 422 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 TUBB2BQ9BVA1 445 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 APOL6Q9BWW8 343 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 ATP2A2P16615 1042 aaKnown RBP10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 PIK3CAP42336 1068 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 Q3C1V9 767 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 CCDC14Q49A88 953 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 SYT10Q6XYQ8 523 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 SESTD1Q86VW0 696 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 CCDC26Q8TAB7 109 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 SREK1Q8WXA9 508 aaKnown RBP10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 FAM81BQ96LP2 452 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 PARK7Q99497 189 aaKnown RBP10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 RIOK1Q9BRS2 568 aaKnown RBP10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 PARP2Q9UGN5 583 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 FAM184BQ9ULE4 1060 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 ARHGEF37A1IGU5 675 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 CTNND1O60716 968 aaKnown RBP10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 TUBBP07437 444 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 FKBP3Q00688 224 aaKnown RBP10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 ZNF543Q08ER8 600 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 CTTNQ14247 550 aaKnown RBP10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 CLUL1Q15846 466 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 C9orf131Q5VYM1 1079 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 MCPH1Q8NEM0 835 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 NAPGQ99747 312 aaPredicted RBP10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 STK10O94804 968 aaKnown RBP10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 CDC27P30260 824 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 ZNF157P51786 506 aaPredicted RBP10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 BPIFB4P59827 614 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 TAF1CQ15572 869 aaPredicted RBP10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 SAMD7Q7Z3H4 446 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 FAM186BQ8IYM0 893 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 ANKRD13AQ8IZ07 590 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 PPM1KQ8N3J5 372 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 TEX13BQ9BXU2 312 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 VCPKMTQ9H867 229 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 NDUFB10O96000 172 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 EEF1GP26641 437 aaKnown RBP10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 PDE6CP51160 858 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 MYL7Q01449 175 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 SURF1Q15526 300 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 CNOT6LQ96LI5 555 aaKnown RBP10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 NT5C1BQ96P26 610 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 ST7Q9NRC1 585 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 DISC1Q9NRI5 854 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 HAUS2Q9NVX0 235 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 EXOC3L4Q17RC7 722 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 TYW1BQ6NUM6 668 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 KCNV1Q6PIU1 500 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 FTOQ9C0B1 505 aaKnown RBP eCLIP10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 IQCGQ9H095 443 aaKnown RBP10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 VPS33BQ9H267 617 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 BHMT2Q9H2M3 363 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 ADARB2Q9NS39 739 aaKnown RBP10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 FANCLQ9NW38 375 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 STIM2Q9P246 746 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 SHTN1A0MZ66 631 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 TNPO2O14787 897 aaKnown RBP10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 USP11P51784 963 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 MB21D1Q8N884 522 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 TSKSQ9UJT2 592 aa10.35□□□□□ -0.75
CLTCL1-208ENST00000615606 ADGRB2O60241 1585 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 MARK3P27448 753 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 CDC25AP30304 524 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 POLR2BP30876 1174 aaKnown RBP10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 LACTBP83111 547 aaPredicted RBP10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 EXOSC10Q01780 885 aaKnown RBP10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 CACNB1Q02641 598 aaPredicted RBP10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 FAM204AQ9H8W3 233 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 ATP6V0A4Q9HBG4 840 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 EMILIN3Q9NT22 766 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 RASA1P20936 1047 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 PTPREP23469 700 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 KLRK1P26718 216 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 MFAP3P55082 362 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 SLFN12LQ6IEE8 588 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 CEP128Q6ZU80 1094 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 ZNF579Q8NAF0 562 aaKnown RBP10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 KIAA1524Q8TCG1 905 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 U2AF1L4Q8WU68 220 aaKnown RBP10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 PLCD4Q9BRC7 762 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 TMEM39BQ9GZU3 492 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 STMN4Q9H169 189 aaPredicted RBP10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 USTQ9Y2C2 406 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 VAV2P52735 878 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 COPB1P53618 953 aaKnown RBP10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 STOX1Q6ZVD7 989 aa10.34□□□□□ -0.75
CLTCL1-208ENST00000615606 ZDHHC15Q96MV8 337 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms