RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 PCDHA4Q9UN74 947 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 RGS16O15492 202 aaPredicted RBP12.92□□□□□ -0.34
CDH5-208ENST00000614547 MYBL1P10243 752 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 USP17L2Q6R6M4 530 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 IRF2BP1Q8IU81 584 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 ZNF211Q13398 564 aaPredicted RBP12.91□□□□□ -0.34
CDH5-208ENST00000614547 PPP2R5BQ15173 497 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 ARHGAP44Q17R89 818 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 MYOCDQ8IZQ8 938 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 TBCKQ8TEA7 893 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 ARPP21Q9UBL0 812 aaPredicted RBP12.91□□□□□ -0.34
CDH5-208ENST00000614547 PTPN22Q9Y2R2 807 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 OPLAHO14841 1288 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 ADAMTS3O15072 1205 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 GJC1P36383 396 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 NBPF9Q3BBW0 867 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 ADGRA1Q86SQ6 560 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 FBXL16Q8N461 479 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 MMGT1Q8N4V1 131 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 CCDC197Q8NCU1 140 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 TGFBRAP1Q8WUH2 860 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 TMEM260Q9NX78 707 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 FAM205AQ6ZU69 1335 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 SPDYE3A6NKU9 549 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 HMGB1P1B2RPK0 211 aaPredicted RBP12.91□□□□□ -0.34
CDH5-208ENST00000614547 PAX7P23759 505 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 IFI16Q16666 785 aaKnown RBP12.91□□□□□ -0.34
CDH5-208ENST00000614547 SUGP1Q8IWZ8 645 aaKnown RBP12.91□□□□□ -0.34
CDH5-208ENST00000614547 COA7Q96BR5 231 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 TRIM9Q9C026 710 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 BCS1LQ9Y276 419 aa12.91□□□□□ -0.34
CDH5-208ENST00000614547 ABCC12Q96J65 1359 aa12.9□□□□□ -0.34
CDH5-208ENST00000614547 PDS5AQ29RF7 1337 aaKnown RBP12.9□□□□□ -0.34
CDH5-208ENST00000614547 GNAQP50148 359 aa12.9□□□□□ -0.34
CDH5-208ENST00000614547 IL17AQ16552 155 aa12.9□□□□□ -0.34
CDH5-208ENST00000614547 FAM83BQ5T0W9 1011 aa12.9□□□□□ -0.34
CDH5-208ENST00000614547 KCNV1Q6PIU1 500 aa12.9□□□□□ -0.34
CDH5-208ENST00000614547 SNX24Q9Y343 169 aa12.9□□□□□ -0.34
CDH5-208ENST00000614547 OVOS2A0A0G2JMS6 1433 aa12.9□□□□□ -0.34
CDH5-208ENST00000614547 ZNF233A6NK53 670 aa12.9□□□□□ -0.34
CDH5-208ENST00000614547 CLGNO14967 610 aa12.9□□□□□ -0.34
CDH5-208ENST00000614547 TTI2Q6NXR4 508 aa12.9□□□□□ -0.34
CDH5-208ENST00000614547 SH3RF1Q7Z6J0 888 aa12.9□□□□□ -0.34
CDH5-208ENST00000614547 SPATS2Q86XZ4 545 aaKnown RBP12.9□□□□□ -0.34
CDH5-208ENST00000614547 TRIM51Q9BSJ1 452 aa12.9□□□□□ -0.34
CDH5-208ENST00000614547 INTS9Q9NV88 658 aaKnown RBP12.9□□□□□ -0.34
CDH5-208ENST00000614547 TSKSQ9UJT2 592 aa12.9□□□□□ -0.34
CDH5-208ENST00000614547 FBXO3Q9UK99 471 aa12.9□□□□□ -0.34
CDH5-208ENST00000614547 ARHGAP23Q9P227 1491 aa12.9□□□□□ -0.34
CDH5-208ENST00000614547 G3V3G9 751 aa12.9□□□□□ -0.35
CDH5-208ENST00000614547 ZNF263O14978 683 aa12.9□□□□□ -0.35
CDH5-208ENST00000614547 ACTN1P12814 892 aa12.9□□□□□ -0.35
CDH5-208ENST00000614547 GNA11P29992 359 aa12.9□□□□□ -0.35
CDH5-208ENST00000614547 ZNF76P36508 570 aa12.9□□□□□ -0.35
CDH5-208ENST00000614547 ALX1Q15699 326 aa12.9□□□□□ -0.35
CDH5-208ENST00000614547 DCAF8Q5TAQ9 597 aa12.9□□□□□ -0.35
CDH5-208ENST00000614547 DENND2CQ68D51 928 aa12.9□□□□□ -0.35
CDH5-208ENST00000614547 REXO1Q8N1G1 1221 aaKnown RBP12.9□□□□□ -0.35
CDH5-208ENST00000614547 LARP4BQ92615 738 aaKnown RBP12.9□□□□□ -0.35
CDH5-208ENST00000614547 PPP1R12CQ9BZL4 782 aa12.9□□□□□ -0.35
CDH5-208ENST00000614547 PNMA2Q9UL42 364 aa12.9□□□□□ -0.35
CDH5-208ENST00000614547 SARNPP82979 210 aaKnown RBP12.89□□□□□ -0.35
CDH5-208ENST00000614547 ADAM9Q13443 819 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 PFKFB3Q16875 520 aaPredicted RBP12.89□□□□□ -0.35
CDH5-208ENST00000614547 SUSD4Q5VX71 490 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 CYB5D1Q6P9G0 228 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 NEK8Q86SG6 692 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 TEX2Q8IWB9 1127 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 SEC16BQ96JE7 1060 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 FAM208AQ9UK61 1670 aaKnown RBP12.89□□□□□ -0.35
CDH5-208ENST00000614547 KDM6AO15550 1401 aaPredicted RBP12.89□□□□□ -0.35
CDH5-208ENST00000614547 ENO4A6NNW6 628 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 CETN3O15182 167 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 NKRFO15226 690 aaKnown RBP eCLIP12.89□□□□□ -0.35
CDH5-208ENST00000614547 PRDX5P30044 214 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 PCK1P35558 622 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 TRAPPC10P48553 1259 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 TROAPQ12815 778 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 FAM26FQ5R3K3 315 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 MAEAQ7L5Y9 396 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 KIF2BQ8N4N8 673 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 GDAP1Q8TB36 358 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 WHAMMQ8TF30 809 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 ZKSCAN4Q969J2 545 aaPredicted RBP12.89□□□□□ -0.35
CDH5-208ENST00000614547 NLRP3Q96P20 1036 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 TLR10Q9BXR5 811 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 USP21Q9UK80 565 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 TTI1O43156 1089 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 SART1O43290 800 aaKnown RBP12.89□□□□□ -0.35
CDH5-208ENST00000614547 DDAH1O94760 285 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 SESN3P58005 492 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 CAPN12Q6ZSI9 719 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 DUSP9Q99956 384 aaKnown RBP12.89□□□□□ -0.35
CDH5-208ENST00000614547 CARD10Q9BWT7 1032 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 PANK4Q9NVE7 773 aa12.89□□□□□ -0.35
CDH5-208ENST00000614547 FGGP02679 453 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 MMEP08473 750 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 PPP2R2AP63151 447 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 GIMAP8Q8ND71 665 aaPredicted RBP12.88□□□□□ -0.35
CDH5-208ENST00000614547 NSRP1Q9H0G5 558 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms