RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 POLR2BP30876 1174 aaKnown RBP9.46□□□□□ -0.9
TTC28-208ENST00000612946 AOC3Q16853 763 aa9.46□□□□□ -0.9
TTC28-208ENST00000612946 ESCO1Q5FWF5 840 aa9.46□□□□□ -0.9
TTC28-208ENST00000612946 SYDE1Q6ZW31 735 aaPredicted RBP9.46□□□□□ -0.9
TTC28-208ENST00000612946 CMTM5Q96DZ9 223 aa9.46□□□□□ -0.9
TTC28-208ENST00000612946 SIKE1Q9BRV8 207 aa9.46□□□□□ -0.9
TTC28-208ENST00000612946 WARS2Q9UGM6 360 aaKnown RBP9.46□□□□□ -0.9
TTC28-208ENST00000612946 MT-ND3P03897 115 aa9.46□□□□□ -0.9
TTC28-208ENST00000612946 LINS1Q8NG48 757 aa9.46□□□□□ -0.9
TTC28-208ENST00000612946 ZSWIM6Q9HCJ5 1215 aa9.46□□□□□ -0.9
TTC28-208ENST00000612946 CCDC87Q9NVE4 849 aa9.46□□□□□ -0.9
TTC28-208ENST00000612946 NLRP11P59045 1033 aaKnown RBP9.45□□□□□ -0.9
TTC28-208ENST00000612946 CNGA2Q16280 664 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 CDC37Q16543 378 aaPredicted RBP9.45□□□□□ -0.9
TTC28-208ENST00000612946 HADHQ16836 314 aaKnown RBP9.45□□□□□ -0.9
TTC28-208ENST00000612946 EPM2AIP1Q7L775 607 aaPredicted RBP9.45□□□□□ -0.9
TTC28-208ENST00000612946 THEMISQ8N1K5 641 aaPredicted RBP9.45□□□□□ -0.9
TTC28-208ENST00000612946 ARMCX3Q9UH62 379 aaPredicted RBP9.45□□□□□ -0.9
TTC28-208ENST00000612946 PNOCQ13519 176 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 TUBA3CQ13748 450 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 MAML1Q92585 1016 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 FAM207AQ9NSI2 230 aaPredicted RBP9.45□□□□□ -0.9
TTC28-208ENST00000612946 TMEM191CA6NGB0 347 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 RASSF9O75901 435 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 TMEM191BP0C7N4 346 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 TMEM154Q6P9G4 183 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 ACAD11Q709F0 780 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 DDX42Q86XP3 938 aaKnown RBP eCLIP9.45□□□□□ -0.9
TTC28-208ENST00000612946 USP15Q9Y4E8 981 aaPredicted RBP9.45□□□□□ -0.9
TTC28-208ENST00000612946 FAM25AB3EWG3 89 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 FAM25CB3EWG5 89 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 FAM25GB3EWG6 89 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 MYCNP04198 464 aaPredicted RBP9.45□□□□□ -0.9
TTC28-208ENST00000612946 TGS1Q96RS0 853 aaKnown RBP9.45□□□□□ -0.9
TTC28-208ENST00000612946 ANLNQ9NQW6 1124 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 CCT8L1PA6NM43 557 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 NLRP9Q7RTR0 991 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 PPM1FP49593 454 aaPredicted RBP9.45□□□□□ -0.9
TTC28-208ENST00000612946 ACTN3Q08043 901 aaPredicted RBP9.45□□□□□ -0.9
TTC28-208ENST00000612946 RHOT2Q8IXI1 618 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 FNBP1Q96RU3 617 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 SLC38A10Q9HBR0 1119 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 SRRM3A6NNA2 597 aaPredicted RBP9.45□□□□□ -0.9
TTC28-208ENST00000612946 SERPING1P05155 500 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 KAZNQ674X7 775 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 TRAF7Q6Q0C0 670 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 TRPM8Q7Z2W7 1104 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 MYOCDQ8IZQ8 938 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 NSMCE1Q8WV22 266 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 MEIS3Q99687 375 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 MYD88Q99836 296 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 LARP6Q9BRS8 491 aaKnown RBP9.45□□□□□ -0.9
TTC28-208ENST00000612946 CARD9Q9H257 536 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 TRPC7Q9HCX4 862 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 DYTNA2CJ06 578 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 FAM187AA6NFU0 413 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 MDH1P40925 334 aaKnown RBP9.45□□□□□ -0.9
TTC28-208ENST00000612946 CYTH1Q15438 398 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 LUZP2Q86TE4 346 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 RASSF3Q86WH2 238 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 PBXIP1Q96AQ6 731 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 EFCAB14O75071 495 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 CBFA2T3O75081 653 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 KRT38O76015 456 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 ARMCX6Q7L4S7 300 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 PLEKHG2Q9H7P9 1386 aa9.45□□□□□ -0.9
TTC28-208ENST00000612946 ANAPC5Q9UJX4 755 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 GSTA4O15217 222 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 HSPA1AP0DMV8 641 aaKnown RBP9.44□□□□□ -0.9
TTC28-208ENST00000612946 HSPA1BP0DMV9 641 aaKnown RBP9.44□□□□□ -0.9
TTC28-208ENST00000612946 RFX1P22670 979 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 BTBD7Q9P203 1132 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 CARSP49589 748 aaKnown RBP9.44□□□□□ -0.9
TTC28-208ENST00000612946 CADPS2Q86UW7 1296 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 MRC2Q9UBG0 1479 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 STAM2O75886 525 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 RPN1P04843 607 aaKnown RBP9.44□□□□□ -0.9
TTC28-208ENST00000612946 RASA3Q14644 834 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 SETD3Q86TU7 594 aaPredicted RBP9.44□□□□□ -0.9
TTC28-208ENST00000612946 STX19Q8N4C7 294 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 TAF1DQ9H5J8 278 aaPredicted RBP9.44□□□□□ -0.9
TTC28-208ENST00000612946 NOVA2Q9UNW9 492 aaKnown RBP9.44□□□□□ -0.9
TTC28-208ENST00000612946 LRCH1Q9Y2L9 728 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 YTHDF3Q7Z739 585 aaKnown RBP9.44□□□□□ -0.9
TTC28-208ENST00000612946 CABP5Q9NP86 173 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 ANKFY1Q9P2R3 1169 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 PCDHA7Q9UN72 937 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 CDK13Q14004 1512 aaKnown RBP9.44□□□□□ -0.9
TTC28-208ENST00000612946 PARP1P09874 1014 aaKnown RBP9.44□□□□□ -0.9
TTC28-208ENST00000612946 S100A1P23297 94 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 ROR2Q01974 943 aaKnown RBP9.44□□□□□ -0.9
TTC28-208ENST00000612946 FAM69CQ0P6D2 419 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 TLK2Q86UE8 772 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 PSMB7Q99436 277 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 WWP1Q9H0M0 922 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.44□□□□□ -0.9
TTC28-208ENST00000612946 VCAM1P19320 739 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 IL10P22301 178 aa9.44□□□□□ -0.9
TTC28-208ENST00000612946 DHX34Q14147 1143 aaKnown RBP9.44□□□□□ -0.9
TTC28-208ENST00000612946 SLC39A14Q15043 492 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms