RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 FOXN1O15353 648 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 CYP3A4P08684 503 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 TAL1P17542 331 aaPredicted RBP10.05□□□□□ -0.8
CCDC47-207ENST00000612558 SLC19A1P41440 591 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 TECP42680 631 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 TXKP42681 527 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 CCDC173Q0VFZ6 552 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 EAPPQ56P03 285 aaPredicted RBP10.05□□□□□ -0.8
CCDC47-207ENST00000612558 SH3D19Q5HYK7 790 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 NT5DC1Q5TFE4 455 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 PAXIP1Q6ZW49 1069 aaPredicted RBP10.05□□□□□ -0.8
CCDC47-207ENST00000612558 SH3RF1Q7Z6J0 888 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 MCF2L2Q86YR7 1114 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 SAMD3Q8N6K7 520 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 PAGE5Q96GU1 130 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 AGBL1Q96MI9 1066 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 MBOAT7Q96N66 472 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 EHMT1Q9H9B1 1298 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 DISC1Q9NRI5 854 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 MAP3K20Q9NYL2 800 aaKnown RBP10.05□□□□□ -0.8
CCDC47-207ENST00000612558 PCDHA5Q9Y5H7 936 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 BIN1O00499 593 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 VWA5AO00534 786 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 TBX3O15119 743 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 MARCH6O60337 910 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 SMC2O95347 1197 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 CDC25AP30304 524 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 CIITAP33076 1130 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 STAT6P42226 847 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 SARSP49591 514 aaKnown RBP10.05□□□□□ -0.8
CCDC47-207ENST00000612558 GHRHRQ02643 423 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 COG2Q14746 738 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 Q4G0T1 1027 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 RRAGBQ5VZM2 374 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 CATSPERGQ6ZRH7 1159 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 C11orf57Q6ZUT1 292 aaPredicted RBP10.05□□□□□ -0.8
CCDC47-207ENST00000612558 LUZP1Q86V48 1076 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 FCHSD1Q86WN1 690 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 SLFN12Q8IYM2 578 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 ANKRD13AQ8IZ07 590 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 CPXCR1Q8N123 301 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 RASSF8Q8NHQ8 419 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 SPATA20Q8TB22 786 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 TBC1D5Q92609 795 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 HAS1Q92839 578 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 SMARCE1Q969G3 411 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 BPIFA3Q9BQP9 254 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 TTC12Q9H892 705 aaPredicted RBP10.05□□□□□ -0.8
CCDC47-207ENST00000612558 RAVER2Q9HCJ3 691 aaKnown RBP10.05□□□□□ -0.8
CCDC47-207ENST00000612558 LRWD1Q9UFC0 647 aa10.05□□□□□ -0.8
CCDC47-207ENST00000612558 A0A087WWV3 80 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 PP2D1A8MPX8 630 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 ALAS1P13196 640 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 AFMP43652 599 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 HSD17B4P51659 736 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 OAZ1P54368 228 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 PPATQ06203 517 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 KARSQ15046 597 aaKnown RBP10.04□□□□□ -0.8
CCDC47-207ENST00000612558 IQCB1Q15051 598 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 DPCR1Q3MIW9 517 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 KMT5BQ4FZB7 885 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 PKDCCQ504Y2 493 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 PDXDC2PQ6P474 469 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 CABP7Q86V35 215 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 TRIML1Q8N9V2 468 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 CLEC4DQ8WXI8 215 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 ATG4CQ96DT6 458 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 PPP1R9BQ96SB3 815 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 CUEDC2Q9H467 287 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 KCNMB3Q9NPA1 279 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 HOXC10Q9NYD6 342 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 PCDHA12Q9UN75 941 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 ADAMTS5Q9UNA0 930 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 RABGAP1Q9Y3P9 1069 aa10.04□□□□□ -0.8
CCDC47-207ENST00000612558 DNAJB2P25686 324 aa10.03□□□□□ -0.8
CCDC47-207ENST00000612558 ZNF76P36508 570 aa10.03□□□□□ -0.8
CCDC47-207ENST00000612558 DPYDQ12882 1025 aa10.03□□□□□ -0.8
CCDC47-207ENST00000612558 TTLL12Q14166 644 aaPredicted RBP10.03□□□□□ -0.8
CCDC47-207ENST00000612558 PRR16Q569H4 304 aa10.03□□□□□ -0.8
CCDC47-207ENST00000612558 ARMC9Q7Z3E5 817 aa10.03□□□□□ -0.8
CCDC47-207ENST00000612558 ERO1BQ86YB8 467 aa10.03□□□□□ -0.8
CCDC47-207ENST00000612558 GRAMD1CQ8IYS0 662 aa10.03□□□□□ -0.8
CCDC47-207ENST00000612558 CALML4Q96GE6 196 aa10.03□□□□□ -0.8
CCDC47-207ENST00000612558 PDLIM2Q96JY6 352 aa10.03□□□□□ -0.8
CCDC47-207ENST00000612558 GSDMAQ96QA5 445 aa10.03□□□□□ -0.8
CCDC47-207ENST00000612558 MAGEF1Q9HAY2 307 aa10.03□□□□□ -0.8
CCDC47-207ENST00000612558 MAN1B1Q9UKM7 699 aa10.03□□□□□ -0.8
CCDC47-207ENST00000612558 WDR90Q96KV7 1748 aa10.03□□□□□ -0.8
CCDC47-207ENST00000612558 PARP14Q460N5 1801 aa10.03□□□□□ -0.8
CCDC47-207ENST00000612558 MYPNQ86TC9 1320 aa10.03□□□□□ -0.8
CCDC47-207ENST00000612558 BECN2A8MW95 431 aa10.02□□□□□ -0.81
CCDC47-207ENST00000612558 FAM86B1E9PN63 330 aa10.02□□□□□ -0.81
CCDC47-207ENST00000612558 GOLGA6L19H0YKK7 550 aa10.02□□□□□ -0.81
CCDC47-207ENST00000612558 CXCL11O14625 94 aa10.02□□□□□ -0.81
CCDC47-207ENST00000612558 ATP2A1O14983 1001 aa10.02□□□□□ -0.81
CCDC47-207ENST00000612558 MYL1P05976 194 aa10.02□□□□□ -0.81
CCDC47-207ENST00000612558 FAM86B2P0C5J1 330 aa10.02□□□□□ -0.81
CCDC47-207ENST00000612558 MORC3Q14149 939 aa10.02□□□□□ -0.81
CCDC47-207ENST00000612558 NAALADL2Q58DX5 795 aa10.02□□□□□ -0.81
CCDC47-207ENST00000612558 KRT79Q5XKE5 535 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms