RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 GLIS3Q8NEA6 775 aa19.11■□□□□ 0.65
NEK3-206ENST00000611833 RPGRIP1Q96KN7 1286 aa19.11■□□□□ 0.65
NEK3-206ENST00000611833 IFIH1Q9BYX4 1025 aaKnown RBP19.11■□□□□ 0.65
NEK3-206ENST00000611833 TANGO6Q9C0B7 1094 aa19.11■□□□□ 0.65
NEK3-206ENST00000611833 DBNDD1Q9H9R9 158 aa19.11■□□□□ 0.65
NEK3-206ENST00000611833 SIPA1L1O43166 1804 aa19.11■□□□□ 0.65
NEK3-206ENST00000611833 ARFGEF1Q9Y6D6 1849 aa19.11■□□□□ 0.65
NEK3-206ENST00000611833 GCFC2P16383 781 aaKnown RBP19.11■□□□□ 0.65
NEK3-206ENST00000611833 HSPA1LP34931 641 aa19.11■□□□□ 0.65
NEK3-206ENST00000611833 CASP8Q14790 479 aa19.11■□□□□ 0.65
NEK3-206ENST00000611833 RRAGAQ7L523 313 aa19.11■□□□□ 0.65
NEK3-206ENST00000611833 PURBQ96QR8 312 aaKnown RBP19.11■□□□□ 0.65
NEK3-206ENST00000611833 ARHGAP20Q9P2F6 1191 aa19.11■□□□□ 0.65
NEK3-206ENST00000611833 ATF5Q9Y2D1 282 aaPredicted RBP19.11■□□□□ 0.65
NEK3-206ENST00000611833 ZNF263O14978 683 aa19.1■□□□□ 0.65
NEK3-206ENST00000611833 MCM3P25205 808 aa19.1■□□□□ 0.65
NEK3-206ENST00000611833 GYS2P54840 703 aa19.1■□□□□ 0.65
NEK3-206ENST00000611833 TCP10Q12799 353 aa19.1■□□□□ 0.65
NEK3-206ENST00000611833 COASYQ13057 564 aa19.1■□□□□ 0.65
NEK3-206ENST00000611833 ZBTB9Q96C00 473 aa19.1■□□□□ 0.65
NEK3-206ENST00000611833 CCDC17Q96LX7 622 aa19.1■□□□□ 0.65
NEK3-206ENST00000611833 PANK4Q9NVE7 773 aa19.1■□□□□ 0.65
NEK3-206ENST00000611833 PCDHA13Q9Y5I0 950 aa19.1■□□□□ 0.65
NEK3-206ENST00000611833 USP17L15C9J2P7 530 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 USP17L13C9JLJ4 530 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 USP17L11C9JVI0 530 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 USP17L18D6R9N7 530 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 USP17L22D6RA61 530 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 USP17L17D6RBQ6 530 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 USP17L19D6RCP7 530 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 USP17L20D6RJB6 530 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 AKR1B10O60218 316 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 EIF4A3P38919 411 aaKnown RBP19.09■□□□□ 0.65
NEK3-206ENST00000611833 KIF11P52732 1056 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 USP17L24Q0WX57 530 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 SEPT2Q15019 361 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 USP17L6PQ6QN14 398 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 LRRC55Q6ZSA7 311 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 MSL3Q8N5Y2 521 aaKnown RBP19.09■□□□□ 0.65
NEK3-206ENST00000611833 DNAJC19Q96DA6 116 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 ZDHHC15Q96MV8 337 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 NT5C3AQ9H0P0 336 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 LRRC53A6NM62 1247 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 TACC1O75410 805 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 EEF2P13639 858 aaKnown RBP19.09■□□□□ 0.65
NEK3-206ENST00000611833 QRICH1Q2TAL8 776 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 CACNA2D4Q7Z3S7 1137 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 KIAA0825Q8IV33 1275 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 TXLNBQ8N3L3 684 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 TRIM58Q8NG06 486 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 NEK11Q8NG66 645 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 UIMC1Q96RL1 719 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 NAP1L4Q99733 375 aaKnown RBP19.09■□□□□ 0.65
NEK3-206ENST00000611833 ADAM21Q9UKJ8 722 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 KDM3AQ9Y4C1 1321 aa19.09■□□□□ 0.65
NEK3-206ENST00000611833 DDTLA6NHG4 134 aaPredicted RBP19.08■□□□□ 0.65
NEK3-206ENST00000611833 TRAF5O00463 557 aa19.08■□□□□ 0.65
NEK3-206ENST00000611833 FKBP3Q00688 224 aaKnown RBP19.08■□□□□ 0.65
NEK3-206ENST00000611833 CCDC40Q4G0X9 1142 aa19.08■□□□□ 0.65
NEK3-206ENST00000611833 FAM26FQ5R3K3 315 aa19.08■□□□□ 0.65
NEK3-206ENST00000611833 ACBD3Q9H3P7 528 aa19.08■□□□□ 0.65
NEK3-206ENST00000611833 ZNF185O15231 689 aa19.08■□□□□ 0.64
NEK3-206ENST00000611833 PDE6BP35913 854 aa19.08■□□□□ 0.64
NEK3-206ENST00000611833 PODNQ7Z5L7 613 aa19.08■□□□□ 0.64
NEK3-206ENST00000611833 GPIHBP1Q8IV16 184 aa19.08■□□□□ 0.64
NEK3-206ENST00000611833 SMCR8Q8TEV9 937 aaPredicted RBP19.08■□□□□ 0.64
NEK3-206ENST00000611833 MASTLQ96GX5 879 aa19.08■□□□□ 0.64
NEK3-206ENST00000611833 TBC1D7Q9P0N9 293 aa19.08■□□□□ 0.64
NEK3-206ENST00000611833 VPS18Q9P253 973 aa19.08■□□□□ 0.64
NEK3-206ENST00000611833 KIAA1024Q9UPX6 916 aa19.08■□□□□ 0.64
NEK3-206ENST00000611833 JRKLQ9Y4A0 524 aa19.08■□□□□ 0.64
NEK3-206ENST00000611833 COL4A3BPQ9Y5P4 624 aa19.08■□□□□ 0.64
NEK3-206ENST00000611833 SLC1A4P43007 532 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 MAP9Q49MG5 647 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 HSP90B2PQ58FF3 399 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 IQCEQ6IPM2 695 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 CCDC102AQ96A19 550 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 GLT8D2Q9H1C3 349 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 SH2D4AQ9H788 454 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 FAM198AQ9UFP1 575 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 PCDHA1Q9Y5I3 950 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 E9PMD0 336 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 MMP10P09238 476 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 CERKLQ49MI3 558 aaPredicted RBP19.07■□□□□ 0.64
NEK3-206ENST00000611833 HYIQ5T013 277 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 FOXR2Q6PJQ5 311 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 CCDC65Q8IXS2 484 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 MKL1Q969V6 931 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 EXOC4Q96A65 974 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 TMX4Q9H1E5 349 aaPredicted RBP19.07■□□□□ 0.64
NEK3-206ENST00000611833 CALCOCO1Q9P1Z2 691 aa19.07■□□□□ 0.64
NEK3-206ENST00000611833 TARSL2A2RTX5 802 aaKnown RBP19.06■□□□□ 0.64
NEK3-206ENST00000611833 SH3BP5LQ7L8J4 393 aa19.06■□□□□ 0.64
NEK3-206ENST00000611833 CCDC155Q8N6L0 562 aa19.06■□□□□ 0.64
NEK3-206ENST00000611833 DRC1Q96MC2 740 aa19.06■□□□□ 0.64
NEK3-206ENST00000611833 DHX36Q9H2U1 1008 aaKnown RBP19.06■□□□□ 0.64
NEK3-206ENST00000611833 MLXIPQ9HAP2 919 aa19.06■□□□□ 0.64
NEK3-206ENST00000611833 NYAP2Q9P242 653 aa19.06■□□□□ 0.64
NEK3-206ENST00000611833 N4BP1O75113 896 aaKnown RBP19.06■□□□□ 0.64
NEK3-206ENST00000611833 MOCS3O95396 460 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms