RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.02□□□□□ -1.29
SNX13-213ENST00000611725 NYAP2Q9P242 653 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 ZBTB21Q9ULJ3 1066 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 AKAP12Q02952 1782 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 GRIK5Q16478 980 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 NAALADL2Q58DX5 795 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 ODR4Q5SWX8 454 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 ADGRF4Q8IZF3 695 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 FAM76AQ8TAV0 307 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 HSD3B7Q9H2F3 369 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 AGPAT5Q9NUQ2 364 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 POLLQ9UGP5 575 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 TCP10L2B9ZVM9 353 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 MEIS1O00470 390 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 CASP8Q14790 479 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 HINFPQ9BQA5 517 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 MED15Q96RN5 788 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 LACRTQ9GZZ8 138 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 CLRN2A0PK11 232 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 ZMYND10O75800 440 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 IL1R1P14778 569 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 HOXA13P31271 388 aaPredicted RBP7.01□□□□□ -1.29
SNX13-213ENST00000611725 ERVK-24P63145 666 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 PPFIA1Q13136 1202 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 DNAJC21Q5F1R6 531 aaKnown RBP7.01□□□□□ -1.29
SNX13-213ENST00000611725 KIFC2Q96AC6 838 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 ERGIC2Q96RQ1 377 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 TDRD3Q9H7E2 651 aaKnown RBP7.01□□□□□ -1.29
SNX13-213ENST00000611725 MRPL11Q9Y3B7 192 aaKnown RBP7.01□□□□□ -1.29
SNX13-213ENST00000611725 RHBDL3P58872 404 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 PAK2Q13177 524 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 KLHL7Q8IXQ5 586 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 IFT20Q8IY31 132 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 FAM20AQ96MK3 541 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 SPATA31A6Q5VVP1 1343 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 UBXN2AP68543 259 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 COASYQ13057 564 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 LRCH2Q5VUJ6 765 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 CDC42EP5Q6NZY7 148 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 ALKBH5Q6P6C2 394 aaKnown RBP7.01□□□□□ -1.29
SNX13-213ENST00000611725 PEX26Q7Z412 305 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 RDH13Q8NBN7 331 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 RIOX1Q9H6W3 641 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 HDAC6Q9UBN7 1215 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 RNF14Q9UBS8 474 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 ADAM21Q9UKJ8 722 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 GOLGA6CA6NDK9 693 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 GOLGA6DP0CG33 693 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 CETN2P41208 172 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 USP11P51784 963 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 VSNL1P62760 191 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 PPP4R3CPQ6ZMV5 832 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 FAM107BQ9H098 131 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 GOLGA6AQ9NYA3 693 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 TNFAIP3P21580 790 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 ZSCAN26Q16670 478 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 SYDE2Q5VT97 1194 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 CENPPQ6IPU0 288 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 SFR1Q86XK3 245 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 DCAF4Q8WV16 495 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 EXOC4Q96A65 974 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 MMS19Q96T76 1030 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 DNAJC7Q99615 494 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 MXD3Q9BW11 206 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 PLVAPQ9BX97 442 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 WDR11Q9BZH6 1224 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 POLD4Q9HCU8 107 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 CTTNBP2NLQ9P2B4 639 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 EBAG9O00559 213 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 SRGAP2O75044 1071 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 NDUFB10O96000 172 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 POTEJP0CG39 1038 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 CYP2J2P51589 502 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 C15orf52Q6ZUT6 534 aaKnown RBP7.01□□□□□ -1.29
SNX13-213ENST00000611725 NOA1Q8NC60 698 aaKnown RBP7.01□□□□□ -1.29
SNX13-213ENST00000611725 AFAP1L1Q8TED9 768 aa7.01□□□□□ -1.29
SNX13-213ENST00000611725 POTEFA5A3E0 1075 aa7□□□□□ -1.29
SNX13-213ENST00000611725 DDX39AO00148 427 aaKnown RBP7□□□□□ -1.29
SNX13-213ENST00000611725 POTEIP0CG38 1075 aa7□□□□□ -1.29
SNX13-213ENST00000611725 FXR2P51116 673 aaKnown RBP eCLIP7□□□□□ -1.29
SNX13-213ENST00000611725 FIGNQ5HY92 759 aa7□□□□□ -1.29
SNX13-213ENST00000611725 PPP4R3AQ6IN85 833 aa7□□□□□ -1.29
SNX13-213ENST00000611725 POTEGQ6S5H5 508 aa7□□□□□ -1.29
SNX13-213ENST00000611725 POTEEQ6S8J3 1075 aa7□□□□□ -1.29
SNX13-213ENST00000611725 MAEAQ7L5Y9 396 aa7□□□□□ -1.29
SNX13-213ENST00000611725 TMEM139Q8IV31 216 aa7□□□□□ -1.29
SNX13-213ENST00000611725 FAM133AQ8N9E0 248 aa7□□□□□ -1.29
SNX13-213ENST00000611725 U2AF1L4Q8WU68 220 aaKnown RBP7□□□□□ -1.29
SNX13-213ENST00000611725 LRRC45Q96CN5 670 aa7□□□□□ -1.29
SNX13-213ENST00000611725 HOMER2Q9NSB8 354 aa7□□□□□ -1.29
SNX13-213ENST00000611725 BZW2Q9Y6E2 419 aaKnown RBP7□□□□□ -1.29
SNX13-213ENST00000611725 SP4Q02446 784 aa7□□□□□ -1.29
SNX13-213ENST00000611725 GRB10Q13322 594 aa7□□□□□ -1.29
SNX13-213ENST00000611725 MIER3Q7Z3K6 550 aa7□□□□□ -1.29
SNX13-213ENST00000611725 FAM186BQ8IYM0 893 aa7□□□□□ -1.29
SNX13-213ENST00000611725 LRRN4CLQ8ND94 238 aa7□□□□□ -1.29
SNX13-213ENST00000611725 PSMD14O00487 310 aa7□□□□□ -1.29
SNX13-213ENST00000611725 SSR1P43307 286 aaKnown RBP7□□□□□ -1.29
SNX13-213ENST00000611725 TMEM132AQ24JP5 1023 aa7□□□□□ -1.29
SNX13-213ENST00000611725 CCDC155Q8N6L0 562 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms