RNA–Protein interactions for RNA: ENST00000611481.1

LINC00540-201, long intergenic non-protein coding RNA 540, humanhuman

TSL 4

Gene LINC00540, Length 588 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-201ENST00000611481 WDR33Q9C0J8 1336 aaKnown RBP6.36□□□□□ -1.39
LINC00540-201ENST00000611481 TMEM82A0PJX8 343 aa6.36□□□□□ -1.39
LINC00540-201ENST00000611481 RGS13O14921 159 aa6.36□□□□□ -1.39
LINC00540-201ENST00000611481 SDHBP21912 280 aa6.36□□□□□ -1.39
LINC00540-201ENST00000611481 CDR1P51861 262 aa6.36□□□□□ -1.39
LINC00540-201ENST00000611481 RTP1P59025 263 aa6.36□□□□□ -1.39
LINC00540-201ENST00000611481 DEFB115Q30KQ5 88 aa6.36□□□□□ -1.39
LINC00540-201ENST00000611481 TEPSINQ96N21 525 aa6.36□□□□□ -1.39
LINC00540-201ENST00000611481 LUC7LQ9NQ29 371 aaKnown RBP6.36□□□□□ -1.39
LINC00540-201ENST00000611481 LY75O60449 1722 aa6.36□□□□□ -1.39
LINC00540-201ENST00000611481 ITSN1Q15811 1721 aa6.36□□□□□ -1.39
LINC00540-201ENST00000611481 SPATA31E1Q6ZUB1 1445 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 CASP8AP2Q9UKL3 1982 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 USP31Q70CQ4 1352 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 CCDC7Q96M83 1385 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 PASKQ96RG2 1323 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 DNAJA2O60884 412 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 MPOP05164 745 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 SYPP08247 313 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 ADRB1P08588 477 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 ARL4AP40617 200 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 KRTAP10-2P60368 255 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 TMEM62Q0P6H9 643 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 PSMD2Q13200 908 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 VMACQ2NL98 169 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 GALNT18Q6P9A2 607 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 FAM129CQ86XR2 697 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 TMEFF1Q8IYR6 380 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 ZDHHC14Q8IZN3 488 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 TNFRSF10DQ9UBN6 386 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 PARP2Q9UGN5 583 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 USP54Q70EL1 1684 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 QRICH2Q9H0J4 1663 aa6.35□□□□□ -1.39
LINC00540-201ENST00000611481 RASSF10A6NK89 507 aa6.34□□□□□ -1.39
LINC00540-201ENST00000611481 F6X3S4 739 aa6.34□□□□□ -1.39
LINC00540-201ENST00000611481 FKTNO75072 461 aa6.34□□□□□ -1.39
LINC00540-201ENST00000611481 MMP10P09238 476 aa6.34□□□□□ -1.39
LINC00540-201ENST00000611481 NFKB2Q00653 900 aa6.34□□□□□ -1.39
LINC00540-201ENST00000611481 GRM1Q13255 1194 aa6.34□□□□□ -1.39
LINC00540-201ENST00000611481 TMC3Q7Z5M5 1100 aa6.34□□□□□ -1.39
LINC00540-201ENST00000611481 GGNQ86UU5 652 aa6.34□□□□□ -1.39
LINC00540-201ENST00000611481 RELL1Q8IUW5 271 aa6.34□□□□□ -1.39
LINC00540-201ENST00000611481 RHOVQ96L33 236 aa6.34□□□□□ -1.39
LINC00540-201ENST00000611481 TMEM74Q96NL1 305 aa6.34□□□□□ -1.39
LINC00540-201ENST00000611481 PLCD4Q9BRC7 762 aa6.34□□□□□ -1.39
LINC00540-201ENST00000611481 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.34□□□□□ -1.39
LINC00540-201ENST00000611481 TAF6LQ9Y6J9 622 aa6.34□□□□□ -1.39
LINC00540-201ENST00000611481 SBF1O95248 1867 aa6.34□□□□□ -1.39
LINC00540-201ENST00000611481 ACEP12821 1306 aa6.33□□□□□ -1.4
LINC00540-201ENST00000611481 ZC3H12DA2A288 527 aaKnown RBP6.33□□□□□ -1.4
LINC00540-201ENST00000611481 WTIPA6NIX2 430 aaPredicted RBP6.33□□□□□ -1.4
LINC00540-201ENST00000611481 UBOX5O94941 541 aa6.33□□□□□ -1.4
LINC00540-201ENST00000611481 GBP2P32456 591 aaPredicted RBP6.33□□□□□ -1.4
LINC00540-201ENST00000611481 DAB2P98082 770 aa6.33□□□□□ -1.4
LINC00540-201ENST00000611481 LAPTM5Q13571 262 aa6.33□□□□□ -1.4
LINC00540-201ENST00000611481 MPP2Q14168 576 aa6.33□□□□□ -1.4
LINC00540-201ENST00000611481 NBPF9Q3BBW0 867 aa6.33□□□□□ -1.4
LINC00540-201ENST00000611481 RGL3Q3MIN7 710 aa6.33□□□□□ -1.4
LINC00540-201ENST00000611481 BBS9Q3SYG4 887 aa6.33□□□□□ -1.4
LINC00540-201ENST00000611481 DALRD3Q5D0E6 543 aaKnown RBP6.33□□□□□ -1.4
LINC00540-201ENST00000611481 LDHDQ86WU2 507 aa6.33□□□□□ -1.4
LINC00540-201ENST00000611481 IGDCC3Q8IVU1 814 aa6.33□□□□□ -1.4
LINC00540-201ENST00000611481 LINC01356Q8N9X3 169 aa6.33□□□□□ -1.4
LINC00540-201ENST00000611481 SYT8Q8NBV8 401 aa6.33□□□□□ -1.4
LINC00540-201ENST00000611481 FCRL2Q96LA5 508 aaPredicted RBP6.33□□□□□ -1.4
LINC00540-201ENST00000611481 KLHL14Q9P2G3 628 aa6.33□□□□□ -1.4
LINC00540-201ENST00000611481 ABT1Q9ULW3 272 aaKnown RBP6.33□□□□□ -1.4
LINC00540-201ENST00000611481 KIF13BQ9NQT8 1826 aa6.33□□□□□ -1.4
LINC00540-201ENST00000611481 ARFGEF1Q9Y6D6 1849 aa6.33□□□□□ -1.4
LINC00540-201ENST00000611481 FADS2P1A8MWK0 482 aa6.32□□□□□ -1.4
LINC00540-201ENST00000611481 CTSHP09668 335 aa6.32□□□□□ -1.4
LINC00540-201ENST00000611481 IL2RBP14784 551 aa6.32□□□□□ -1.4
LINC00540-201ENST00000611481 RAG1P15918 1043 aa6.32□□□□□ -1.4
LINC00540-201ENST00000611481 ENDOUP21128 410 aaKnown RBP6.32□□□□□ -1.4
LINC00540-201ENST00000611481 RAD51AP2Q09MP3 1159 aa6.32□□□□□ -1.4
LINC00540-201ENST00000611481 PWP1Q13610 501 aa6.32□□□□□ -1.4
LINC00540-201ENST00000611481 ARSHQ5FYA8 562 aa6.32□□□□□ -1.4
LINC00540-201ENST00000611481 SNAP47Q5SQN1 464 aa6.32□□□□□ -1.4
LINC00540-201ENST00000611481 NBPF12Q5TAG4 269 aaPredicted RBP6.32□□□□□ -1.4
LINC00540-201ENST00000611481 ZPBP2Q6X784 338 aa6.32□□□□□ -1.4
LINC00540-201ENST00000611481 TMC6Q7Z403 805 aa6.32□□□□□ -1.4
LINC00540-201ENST00000611481 REC114Q7Z4M0 266 aa6.32□□□□□ -1.4
LINC00540-201ENST00000611481 FRMD5Q7Z6J6 570 aa6.32□□□□□ -1.4
LINC00540-201ENST00000611481 PWWP2AQ96N64 755 aa6.32□□□□□ -1.4
LINC00540-201ENST00000611481 RSRP1Q9BUV0 290 aa6.32□□□□□ -1.4
LINC00540-201ENST00000611481 C5P01031 1676 aa6.32□□□□□ -1.4
LINC00540-201ENST00000611481 BRCA1P38398 1863 aaKnown RBP6.32□□□□□ -1.4
LINC00540-201ENST00000611481 PIK3C2GO75747 1445 aa6.32□□□□□ -1.4
LINC00540-201ENST00000611481 NSD2O96028 1365 aa6.31□□□□□ -1.4
LINC00540-201ENST00000611481 USP47Q96K76 1375 aa6.31□□□□□ -1.4
LINC00540-201ENST00000611481 RGPD5Q99666 1765 aa6.31□□□□□ -1.4
LINC00540-201ENST00000611481 LTBP1Q14766 1721 aa6.31□□□□□ -1.4
LINC00540-201ENST00000611481 ADAMTS7Q9UKP4 1686 aa6.31□□□□□ -1.4
LINC00540-201ENST00000611481 ANKRD33BA6NCL7 494 aa6.31□□□□□ -1.4
LINC00540-201ENST00000611481 PRAMEF1O95521 474 aa6.31□□□□□ -1.4
LINC00540-201ENST00000611481 KCNA3P22001 575 aa6.31□□□□□ -1.4
LINC00540-201ENST00000611481 RAB3GAP1Q15042 981 aa6.31□□□□□ -1.4
LINC00540-201ENST00000611481 HSF5Q4G112 596 aaPredicted RBP6.31□□□□□ -1.4
LINC00540-201ENST00000611481 GOLM1Q8NBJ4 401 aa6.31□□□□□ -1.4
LINC00540-201ENST00000611481 GPR101Q96P66 508 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms