RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 IRX2Q9BZI1 471 aaPredicted RBP15.17■□□□□ 0.02
NEK3-205ENST00000610828 PANK4Q9NVE7 773 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 NKRFO15226 690 aaKnown RBP eCLIP15.16■□□□□ 0.02
NEK3-205ENST00000610828 MED24O75448 989 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 TRIM21P19474 475 aaKnown RBP15.16■□□□□ 0.02
NEK3-205ENST00000610828 ZNF76P36508 570 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 ELF2Q15723 593 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 NBPF9Q3BBW0 867 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 MIIPQ5JXC2 388 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 OR8K1Q8NGG5 319 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 LENG9Q96B70 501 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 PCMTD1Q96MG8 357 aaPredicted RBP15.16■□□□□ 0.02
NEK3-205ENST00000610828 VPS33BQ9H267 617 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 SMCHD1A6NHR9 2005 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 POTEFA5A3E0 1075 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 TBX3O15119 743 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 CFBP00751 764 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 POTEIP0CG38 1075 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 LRRC63Q05C16 580 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 SPIRE1Q08AE8 756 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 RAD51AP2Q09MP3 1159 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 TSR1Q2NL82 804 aaKnown RBP15.16■□□□□ 0.02
NEK3-205ENST00000610828 FKBP1CQ5VVH2 108 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 POTEGQ6S5H5 508 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 POTEEQ6S8J3 1075 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 GPBP1Q86WP2 473 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 LRRN4CLQ8ND94 238 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 PIM2Q9P1W9 311 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 CAPN11Q9UMQ6 739 aa15.16■□□□□ 0.02
NEK3-205ENST00000610828 SCAF8Q9UPN6 1271 aaKnown RBP15.16■□□□□ 0.02
NEK3-205ENST00000610828 WNT10BO00744 389 aa15.15■□□□□ 0.02
NEK3-205ENST00000610828 KLK7P49862 253 aa15.15■□□□□ 0.02
NEK3-205ENST00000610828 CACNB1Q02641 598 aaPredicted RBP15.15■□□□□ 0.02
NEK3-205ENST00000610828 FAM26FQ5R3K3 315 aa15.15■□□□□ 0.02
NEK3-205ENST00000610828 FAM83AQ86UY5 434 aa15.15■□□□□ 0.02
NEK3-205ENST00000610828 CATSPER3Q86XQ3 398 aa15.15■□□□□ 0.02
NEK3-205ENST00000610828 MYOCDQ8IZQ8 938 aa15.15■□□□□ 0.02
NEK3-205ENST00000610828 MTMR14Q8NCE2 650 aa15.15■□□□□ 0.02
NEK3-205ENST00000610828 ERMNQ8TAM6 284 aa15.15■□□□□ 0.02
NEK3-205ENST00000610828 CYP2W1Q8TAV3 490 aa15.15■□□□□ 0.02
NEK3-205ENST00000610828 CHP1Q99653 195 aa15.15■□□□□ 0.02
NEK3-205ENST00000610828 VCPKMTQ9H867 229 aa15.15■□□□□ 0.02
NEK3-205ENST00000610828 TBC1D7Q9P0N9 293 aa15.15■□□□□ 0.02
NEK3-205ENST00000610828 NPHP3-ACAD11A0A0J9YXS1 232 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 PIK3CDO00329 1044 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 TBC1D12O60347 775 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 FGFR1OPO95684 399 aaKnown RBP15.14■□□□□ 0.01
NEK3-205ENST00000610828 KRT18P05783 430 aaKnown RBP15.14■□□□□ 0.01
NEK3-205ENST00000610828 CAP2P40123 477 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 TRAF1Q13077 416 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 ARHGAP29Q52LW3 1261 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 FKBP15Q5T1M5 1219 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 CHURC1Q8WUH1 139 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 DNAJC7Q99615 494 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 TSG101Q99816 390 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 MEIS1O00470 390 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 MSH4O15457 936 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 ERCC3P19447 782 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 GLIPR1L2Q4G1C9 344 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 CCDC84Q86UT8 332 aaPredicted RBP15.14■□□□□ 0.01
NEK3-205ENST00000610828 CCDC65Q8IXS2 484 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 TBC1D5Q92609 795 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 FAM20AQ96MK3 541 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 SLF1Q9BQI6 1058 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 NUP58Q9BVL2 599 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 GLIS2Q9BZE0 524 aaPredicted RBP15.14■□□□□ 0.01
NEK3-205ENST00000610828 AGPAT5Q9NUQ2 364 aa15.14■□□□□ 0.01
NEK3-205ENST00000610828 CGNQ9P2M7 1197 aaKnown RBP15.14■□□□□ 0.01
NEK3-205ENST00000610828 SHTN1A0MZ66 631 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 SLC26A4O43511 780 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 KIF5CO60282 957 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 CYP11B2P19099 503 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 HOXA7P31268 230 aaPredicted RBP15.13■□□□□ 0.01
NEK3-205ENST00000610828 CIITAP33076 1130 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 ERCC6LQ2NKX8 1250 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 HERC4Q5GLZ8 1057 aaPredicted RBP15.13■□□□□ 0.01
NEK3-205ENST00000610828 CIAPIN1Q6FI81 312 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 MNS1Q8NEH6 495 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 JDP2Q8WYK2 163 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 ZHX3Q9H4I2 956 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 SH2D4AQ9H788 454 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 ZBTB7AO95365 584 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 RPA1P27694 616 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 SLC12A3P55017 1021 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 VWA3BQ502W6 1294 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 RETREG2Q8NC44 543 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 FGFBP2Q9BYJ0 223 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 TTYH3Q9C0H2 523 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 RANBP17Q9H2T7 1088 aaKnown RBP15.13■□□□□ 0.01
NEK3-205ENST00000610828 MYOZ2Q9NPC6 264 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 FBXO28Q9NVF7 368 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 DNM3Q9UQ16 869 aa15.13■□□□□ 0.01
NEK3-205ENST00000610828 EPN1Q9Y6I3 576 aaPredicted RBP15.13■□□□□ 0.01
NEK3-205ENST00000610828 RASSF10A6NK89 507 aa15.12■□□□□ 0.01
NEK3-205ENST00000610828 NDUFA10O95299 355 aa15.12■□□□□ 0.01
NEK3-205ENST00000610828 CYP3A4P08684 503 aa15.12■□□□□ 0.01
NEK3-205ENST00000610828 PSMC6P62333 389 aa15.12■□□□□ 0.01
NEK3-205ENST00000610828 CYP4A11Q02928 519 aa15.12■□□□□ 0.01
NEK3-205ENST00000610828 PABPC4Q13310 644 aaKnown RBP eCLIP15.12■□□□□ 0.01
NEK3-205ENST00000610828 WDR59Q6PJI9 974 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms