RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 EVCP57679 992 aa17.34■□□□□ 0.37
LMBR1-220ENST00000609081 MRPS9P82933 396 aaKnown RBP17.34■□□□□ 0.37
LMBR1-220ENST00000609081 SMAD3P84022 425 aaKnown RBP17.34■□□□□ 0.37
LMBR1-220ENST00000609081 FAM47CQ5HY64 1035 aa17.34■□□□□ 0.37
LMBR1-220ENST00000609081 C9orf50Q5SZB4 431 aa17.34■□□□□ 0.37
LMBR1-220ENST00000609081 RNPC3Q96LT9 517 aaKnown RBP17.34■□□□□ 0.37
LMBR1-220ENST00000609081 SPATA33Q96N06 139 aa17.34■□□□□ 0.37
LMBR1-220ENST00000609081 NOC4LQ9BVI4 516 aaKnown RBP17.34■□□□□ 0.37
LMBR1-220ENST00000609081 USP26Q9BXU7 913 aa17.34■□□□□ 0.37
LMBR1-220ENST00000609081 PPP1R12CQ9BZL4 782 aa17.34■□□□□ 0.37
LMBR1-220ENST00000609081 TRPV6Q9H1D0 765 aa17.34■□□□□ 0.37
LMBR1-220ENST00000609081 MTIF3Q9H2K0 278 aaKnown RBP17.34■□□□□ 0.37
LMBR1-220ENST00000609081 MLXIPQ9HAP2 919 aa17.34■□□□□ 0.37
LMBR1-220ENST00000609081 NAP1L2Q9ULW6 460 aaPredicted RBP17.34■□□□□ 0.37
LMBR1-220ENST00000609081 V9GY48 417 aaPredicted RBP17.34■□□□□ 0.37
LMBR1-220ENST00000609081 SPATA31C2B4DYI2 1134 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 PITPNM1O00562 1244 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 MAFGO15525 162 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 F2P00734 622 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 PFKMP08237 780 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 NAPAP54920 295 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 APOBRQ0VD83 1088 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 MCTP2Q6DN12 878 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 METTL7BQ6UX53 244 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 RUFY3Q7L099 469 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 RPUSD2Q8IZ73 545 aaKnown RBP17.33■□□□□ 0.36
LMBR1-220ENST00000609081 CCDC155Q8N6L0 562 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 CCDC12Q8WUD4 166 aaPredicted RBP17.33■□□□□ 0.36
LMBR1-220ENST00000609081 GPRASP2Q96D09 838 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 ZSWIM6Q9HCJ5 1215 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 IL23AQ9NPF7 189 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 RIC8AQ9NPQ8 531 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 FAM217BQ9NTX9 383 aaPredicted RBP17.33■□□□□ 0.36
LMBR1-220ENST00000609081 BARHL2Q9NY43 387 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 NOD1Q9Y239 953 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 CYP46A1Q9Y6A2 500 aa17.33■□□□□ 0.36
LMBR1-220ENST00000609081 hCG_1642624A0A1W2PR95 340 aa17.32■□□□□ 0.36
LMBR1-220ENST00000609081 CSF2RAP15509 400 aa17.32■□□□□ 0.36
LMBR1-220ENST00000609081 CDC27P30260 824 aa17.32■□□□□ 0.36
LMBR1-220ENST00000609081 CYP2C18P33260 490 aa17.32■□□□□ 0.36
LMBR1-220ENST00000609081 ADCY7P51828 1080 aa17.32■□□□□ 0.36
LMBR1-220ENST00000609081 BFSP2Q13515 415 aa17.32■□□□□ 0.36
LMBR1-220ENST00000609081 WWC2Q6AWC2 1192 aa17.32■□□□□ 0.36
LMBR1-220ENST00000609081 KAT2BQ92831 832 aa17.32■□□□□ 0.36
LMBR1-220ENST00000609081 GPKOWQ92917 476 aaPredicted RBP eCLIP17.32■□□□□ 0.36
LMBR1-220ENST00000609081 TRMT13Q9NUP7 481 aaKnown RBP17.32■□□□□ 0.36
LMBR1-220ENST00000609081 NOP56O00567 594 aaKnown RBP17.31■□□□□ 0.36
LMBR1-220ENST00000609081 CPA1P15085 419 aa17.31■□□□□ 0.36
LMBR1-220ENST00000609081 RFC2P35250 354 aa17.31■□□□□ 0.36
LMBR1-220ENST00000609081 EPHB4P54760 987 aa17.31■□□□□ 0.36
LMBR1-220ENST00000609081 SP2Q02086 613 aa17.31■□□□□ 0.36
LMBR1-220ENST00000609081 AP3B2Q13367 1082 aa17.31■□□□□ 0.36
LMBR1-220ENST00000609081 PFKFB3Q16875 520 aaPredicted RBP17.31■□□□□ 0.36
LMBR1-220ENST00000609081 HSDL1Q3SXM5 330 aa17.31■□□□□ 0.36
LMBR1-220ENST00000609081 C7orf31Q8N865 590 aa17.31■□□□□ 0.36
LMBR1-220ENST00000609081 CAGE1Q8TC20 777 aa17.31■□□□□ 0.36
LMBR1-220ENST00000609081 PCDHA6Q9UN73 950 aa17.31■□□□□ 0.36
LMBR1-220ENST00000609081 PCDHA8Q9Y5H6 950 aa17.31■□□□□ 0.36
LMBR1-220ENST00000609081 TMEM265A0A087WTH1 108 aa17.3■□□□□ 0.36
LMBR1-220ENST00000609081 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.3■□□□□ 0.36
LMBR1-220ENST00000609081 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.3■□□□□ 0.36
LMBR1-220ENST00000609081 ESYT2A0FGR8 921 aa17.3■□□□□ 0.36
LMBR1-220ENST00000609081 HAS3O00219 553 aa17.3■□□□□ 0.36
LMBR1-220ENST00000609081 PARNO95453 639 aaKnown RBP17.3■□□□□ 0.36
LMBR1-220ENST00000609081 SCG2P13521 617 aa17.3■□□□□ 0.36
LMBR1-220ENST00000609081 ADD1P35611 737 aaKnown RBP17.3■□□□□ 0.36
LMBR1-220ENST00000609081 PSEN2P49810 448 aa17.3■□□□□ 0.36
LMBR1-220ENST00000609081 AKAP17AQ02040 695 aaKnown RBP17.3■□□□□ 0.36
LMBR1-220ENST00000609081 MFSD10Q14728 455 aa17.3■□□□□ 0.36
LMBR1-220ENST00000609081 PTGISQ16647 500 aa17.3■□□□□ 0.36
LMBR1-220ENST00000609081 KIAA0753Q2KHM9 967 aa17.3■□□□□ 0.36
LMBR1-220ENST00000609081 TMEM240Q5SV17 173 aa17.3■□□□□ 0.36
LMBR1-220ENST00000609081 DEFB123Q8N688 67 aa17.3■□□□□ 0.36
LMBR1-220ENST00000609081 RETREG2Q8NC44 543 aa17.3■□□□□ 0.36
LMBR1-220ENST00000609081 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.3■□□□□ 0.361e-6■■■□□ 17.6
LMBR1-220ENST00000609081 RNF26Q9BY78 433 aaPredicted RBP17.3■□□□□ 0.36
LMBR1-220ENST00000609081 RTEL1Q9NZ71 1219 aa17.3■□□□□ 0.36
LMBR1-220ENST00000609081 GTF2IRD1Q9UHL9 959 aa17.3■□□□□ 0.36
LMBR1-220ENST00000609081 SMCO2A6NFE2 343 aa17.29■□□□□ 0.36
LMBR1-220ENST00000609081 STXBP3O00186 592 aa17.29■□□□□ 0.36
LMBR1-220ENST00000609081 PRPF3O43395 683 aaKnown RBP17.29■□□□□ 0.36
LMBR1-220ENST00000609081 FGBP02675 491 aa17.29■□□□□ 0.36
LMBR1-220ENST00000609081 ANAPC15P60006 121 aa17.29■□□□□ 0.36
LMBR1-220ENST00000609081 SEMA3FQ13275 785 aa17.29■□□□□ 0.36
LMBR1-220ENST00000609081 UBE2SQ16763 222 aa17.29■□□□□ 0.36
LMBR1-220ENST00000609081 AFAP1L1Q8TED9 768 aa17.29■□□□□ 0.36
LMBR1-220ENST00000609081 HERVK_113Q902F9 699 aa17.29■□□□□ 0.36
LMBR1-220ENST00000609081 WNT8AQ9H1J5 351 aa17.29■□□□□ 0.36
LMBR1-220ENST00000609081 UBIAD1Q9Y5Z9 338 aa17.29■□□□□ 0.36
LMBR1-220ENST00000609081 TANC1Q9C0D5 1861 aa17.29■□□□□ 0.36
LMBR1-220ENST00000609081 ZNF286BP0CG31 522 aa17.28■□□□□ 0.36
LMBR1-220ENST00000609081 CYP2C9P11712 490 aa17.28■□□□□ 0.36
LMBR1-220ENST00000609081 IFNAR1P17181 557 aa17.28■□□□□ 0.36
LMBR1-220ENST00000609081 PDIA3P30101 505 aaKnown RBP17.28■□□□□ 0.36
LMBR1-220ENST00000609081 CCL23P55773 120 aa17.28■□□□□ 0.36
LMBR1-220ENST00000609081 CHMP4BP1P59074 171 aa17.28■□□□□ 0.36
LMBR1-220ENST00000609081 RBL2Q08999 1139 aa17.28■□□□□ 0.36
LMBR1-220ENST00000609081 MTMR1Q13613 665 aa17.28■□□□□ 0.36
LMBR1-220ENST00000609081 ZNF697Q5TEC3 545 aa17.28■□□□□ 0.36
LMBR1-220ENST00000609081 RASIP1Q5U651 963 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms