RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	LCP1	P13796	627 aa		6.21	□□□□□ -1.42
LAMA4-222	ENST00000604740	LTBR	P36941	435 aa		6.21	□□□□□ -1.42
LAMA4-222	ENST00000604740	ADAM9	Q13443	819 aa		6.21	□□□□□ -1.42
LAMA4-222	ENST00000604740	ACBD5	Q5T8D3	534 aa	Predicted RBP	6.21	□□□□□ -1.42
LAMA4-222	ENST00000604740	VPS37D	Q86XT2	251 aa		6.21	□□□□□ -1.42
LAMA4-222	ENST00000604740	LCOR	Q96JN0	433 aa	Predicted RBP	6.21	□□□□□ -1.42
LAMA4-222	ENST00000604740	C8orf49	Q96NF6	230 aa		6.21	□□□□□ -1.42
LAMA4-222	ENST00000604740	DTL	Q9NZJ0	730 aa		6.21	□□□□□ -1.42
LAMA4-222	ENST00000604740	PCDHB4	Q9Y5E5	795 aa		6.21	□□□□□ -1.42
LAMA4-222	ENST00000604740		H7BY64	318 aa		6.2	□□□□□ -1.42
LAMA4-222	ENST00000604740	HGS	O14964	777 aa	Predicted RBP	6.2	□□□□□ -1.42
LAMA4-222	ENST00000604740	CYP1A1	P04798	512 aa	Predicted RBP	6.2	□□□□□ -1.42
LAMA4-222	ENST00000604740	GFRA1	P56159	465 aa		6.2	□□□□□ -1.42
LAMA4-222	ENST00000604740	LSAMP	Q13449	338 aa		6.2	□□□□□ -1.42
LAMA4-222	ENST00000604740	STEAP3	Q658P3	488 aa		6.2	□□□□□ -1.42
LAMA4-222	ENST00000604740	MRM1	Q6IN84	353 aa	Known RBP	6.2	□□□□□ -1.42
LAMA4-222	ENST00000604740	TMEM145	Q8NBT3	493 aa		6.2	□□□□□ -1.42
LAMA4-222	ENST00000604740	ARRDC4	Q8NCT1	418 aa		6.2	□□□□□ -1.42
LAMA4-222	ENST00000604740	TOE1	Q96GM8	510 aa	Known RBP	6.2	□□□□□ -1.42
LAMA4-222	ENST00000604740	CCDC140	Q96MF4	163 aa		6.2	□□□□□ -1.42
LAMA4-222	ENST00000604740	SAMD11	Q96NU1	681 aa		6.2	□□□□□ -1.42
LAMA4-222	ENST00000604740	CLDND1	Q9NY35	253 aa		6.2	□□□□□ -1.42
LAMA4-222	ENST00000604740	PRKAG3	Q9UGI9	489 aa		6.2	□□□□□ -1.42
LAMA4-222	ENST00000604740	ZNF28	P17035	718 aa		6.19	□□□□□ -1.42
LAMA4-222	ENST00000604740	ERCC5	P28715	1186 aa	Predicted RBP	6.19	□□□□□ -1.42
LAMA4-222	ENST00000604740	FXN	Q16595	210 aa		6.19	□□□□□ -1.42
LAMA4-222	ENST00000604740	CPZ	Q66K79	652 aa		6.19	□□□□□ -1.42
LAMA4-222	ENST00000604740	TTC9B	Q8N6N2	239 aa		6.19	□□□□□ -1.42
LAMA4-222	ENST00000604740	CHST13	Q8NET6	341 aa		6.19	□□□□□ -1.42
LAMA4-222	ENST00000604740	CLIC6	Q96NY7	704 aa		6.19	□□□□□ -1.42
LAMA4-222	ENST00000604740	L2HGDH	Q9H9P8	463 aa		6.19	□□□□□ -1.42
LAMA4-222	ENST00000604740	TCRBV5S2	A0A599	114 aa		6.18	□□□□□ -1.42
LAMA4-222	ENST00000604740	DGKI	O75912	1065 aa		6.18	□□□□□ -1.42
LAMA4-222	ENST00000604740	ZNF20	P17024	532 aa		6.18	□□□□□ -1.42
LAMA4-222	ENST00000604740	ETFB	P38117	255 aa		6.18	□□□□□ -1.42
LAMA4-222	ENST00000604740	TESK1	Q15569	626 aa		6.18	□□□□□ -1.42
LAMA4-222	ENST00000604740	DENND5A	Q6IQ26	1287 aa		6.18	□□□□□ -1.42
LAMA4-222	ENST00000604740	GLB1L	Q6UWU2	654 aa		6.18	□□□□□ -1.42
LAMA4-222	ENST00000604740	MICAL1	Q8TDZ2	1067 aa		6.18	□□□□□ -1.42
LAMA4-222	ENST00000604740	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	6.18	□□□□□ -1.42
LAMA4-222	ENST00000604740	KRTAP3-1	Q9BYR8	98 aa		6.18	□□□□□ -1.42
LAMA4-222	ENST00000604740	EPB41L1	Q9H4G0	881 aa		6.18	□□□□□ -1.42
LAMA4-222	ENST00000604740	CROT	Q9UKG9	612 aa		6.18	□□□□□ -1.42
LAMA4-222	ENST00000604740	C9orf118	A6NHY6	69 aa		6.17	□□□□□ -1.42
LAMA4-222	ENST00000604740	LAMTOR5	O43504	91 aa		6.17	□□□□□ -1.42
LAMA4-222	ENST00000604740	TNFRSF1A	P19438	455 aa		6.17	□□□□□ -1.42
LAMA4-222	ENST00000604740	GNL2	Q13823	731 aa	Known RBP	6.17	□□□□□ -1.42
LAMA4-222	ENST00000604740	EMC4	Q5J8M3	183 aa		6.17	□□□□□ -1.42
LAMA4-222	ENST00000604740	TEPP	Q6URK8	271 aa		6.17	□□□□□ -1.42
LAMA4-222	ENST00000604740	EEPD1	Q7L9B9	569 aa		6.17	□□□□□ -1.42
LAMA4-222	ENST00000604740	LIMS2	Q7Z4I7	341 aa		6.17	□□□□□ -1.42
LAMA4-222	ENST00000604740	C1orf159	Q96HA4	380 aa		6.17	□□□□□ -1.42
LAMA4-222	ENST00000604740	MYOT	Q9UBF9	498 aa		6.17	□□□□□ -1.42
LAMA4-222	ENST00000604740	ST6GALNAC2	Q9UJ37	374 aa		6.17	□□□□□ -1.42
LAMA4-222	ENST00000604740	AGRP	O00253	132 aa		6.16	□□□□□ -1.42
LAMA4-222	ENST00000604740	MATN3	O15232	486 aa		6.16	□□□□□ -1.42
LAMA4-222	ENST00000604740	B4GALT3	O60512	393 aa		6.16	□□□□□ -1.42
LAMA4-222	ENST00000604740	TADA3	O75528	432 aa		6.16	□□□□□ -1.42
LAMA4-222	ENST00000604740	GJB6	O95452	261 aa		6.16	□□□□□ -1.42
LAMA4-222	ENST00000604740	SURF1	Q15526	300 aa		6.16	□□□□□ -1.42
LAMA4-222	ENST00000604740	PLEKHH3	Q7Z736	793 aa		6.16	□□□□□ -1.42
LAMA4-222	ENST00000604740	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	6.16	□□□□□ -1.42
LAMA4-222	ENST00000604740	TMEM209	Q96SK2	561 aa		6.16	□□□□□ -1.42
LAMA4-222	ENST00000604740	TMEM168	Q9H0V1	697 aa		6.16	□□□□□ -1.42
LAMA4-222	ENST00000604740	MAFK	O60675	156 aa		6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	CYP7B1	O75881	506 aa		6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	LRG1	P02750	347 aa		6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	IL13	P35225	146 aa		6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	GRIA2	P42262	883 aa		6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	MLLT6	P55198	1093 aa	Predicted RBP	6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	PPP2R2A	P63151	447 aa		6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	ZXDA	P98168	799 aa		6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	SLC10A6	Q3KNW5	377 aa		6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	SLC35F1	Q5T1Q4	408 aa		6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	TMC5	Q6UXY8	1006 aa		6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	KCTD13	Q8WZ19	329 aa		6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	YTHDC1	Q96MU7	727 aa	Known RBP	6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	WRNIP1	Q96S55	665 aa		6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	SSBP3	Q9BWW4	388 aa	Predicted RBP	6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	C1QTNF3	Q9BXJ4	246 aa		6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	EPN3	Q9H201	632 aa		6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	FTSJ1	Q9UET6	329 aa		6.15	□□□□□ -1.42
LAMA4-222	ENST00000604740	KRIT1	O00522	736 aa		6.14	□□□□□ -1.43
LAMA4-222	ENST00000604740	TRMT10B	Q6PF06	316 aa	Known RBP	6.14	□□□□□ -1.43
LAMA4-222	ENST00000604740	PHOSPHO1	Q8TCT1	267 aa		6.14	□□□□□ -1.43
LAMA4-222	ENST00000604740	ZCCHC14	Q8WYQ9	949 aa	Known RBP	6.14	□□□□□ -1.43
LAMA4-222	ENST00000604740	DVL3	Q92997	716 aa	Predicted RBP	6.14	□□□□□ -1.43
LAMA4-222	ENST00000604740	IER2	Q9BTL4	223 aa		6.14	□□□□□ -1.43
LAMA4-222	ENST00000604740	SMOC1	Q9H4F8	434 aa		6.14	□□□□□ -1.43
LAMA4-222	ENST00000604740	ZNF408	Q9H9D4	720 aa		6.14	□□□□□ -1.43
LAMA4-222	ENST00000604740	R3HCC1	Q9Y3T6	440 aa	Known RBP	6.14	□□□□□ -1.43
LAMA4-222	ENST00000604740	NPFFR2	Q9Y5X5	522 aa		6.14	□□□□□ -1.43
LAMA4-222	ENST00000604740	C1QTNF3-AMACR	E9PGA6	284 aa		6.13	□□□□□ -1.43
LAMA4-222	ENST00000604740	FGR	P09769	529 aa		6.13	□□□□□ -1.43
LAMA4-222	ENST00000604740	MAP4K2	Q12851	820 aa		6.13	□□□□□ -1.43
LAMA4-222	ENST00000604740	USP53	Q70EK8	1073 aa		6.13	□□□□□ -1.43
LAMA4-222	ENST00000604740	MBD6	Q96DN6	1003 aa		6.13	□□□□□ -1.43
LAMA4-222	ENST00000604740	JAM3	Q9BX67	310 aa		6.13	□□□□□ -1.43
LAMA4-222	ENST00000604740	JADE2	Q9NQC1	790 aa		6.13	□□□□□ -1.43
LAMA4-222	ENST00000604740	PPP4R1L	Q9P1A2	415 aa		6.13	□□□□□ -1.43

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