RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 NOL4O94818 638 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 SERPING1P05155 500 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 ERCC3P19447 782 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 KLRC1P26715 233 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 SLC9C1Q4G0N8 1177 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 INTS5Q6P9B9 1019 aaKnown RBP16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 LRIG3Q6UXM1 1119 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 MAATS1Q7Z4T9 603 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 CCDC13Q8IYE1 715 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 ZMYND12Q9H0C1 365 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 NLRC4Q9NPP4 1024 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 E7EVH7 732 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 RASSF9O75901 435 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 CAMTA2O94983 1202 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 USP17L8P0C7I0 530 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 ATP6V1AP38606 617 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 NONOQ15233 471 aaKnown RBP eCLIP16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 SLC4A8Q2Y0W8 1093 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 SFMBT2Q5VUG0 894 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 CD248Q9HCU0 757 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 CEP72Q9P209 647 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 TMEM59LQ9UK28 342 aa16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 PACSIN2Q9UNF0 486 aaPredicted RBP16.81■□□□□ 0.28
LYSMD4-211ENST00000604213 RNASE9P60153 205 aaKnown RBP16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 EHHADHQ08426 723 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 CCDC40Q4G0X9 1142 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 USP38Q8NB14 1042 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 ZKSCAN4Q969J2 545 aaPredicted RBP16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 CYFIP2Q96F07 1278 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 PNMA5Q96PV4 448 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 NUCKS1Q9H1E3 243 aaKnown RBP16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 ISCUQ9H1K1 167 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 TAF1DQ9H5J8 278 aaPredicted RBP16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 KLC4Q9NSK0 619 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 SCN7AQ01118 1682 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 PALM3A6NDB9 673 aaPredicted RBP16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 H0YGN5 161 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 CHUKO15111 745 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 ECHS1P30084 290 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 ERVK-9P63128 1117 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 TNNC1P63316 161 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 DRP2Q13474 957 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 FAM83BQ5T0W9 1011 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 DYMQ7RTS9 669 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 FBXO33Q7Z6M2 555 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 NEK8Q86SG6 692 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 RPAINQ86UA6 219 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 EIF1ADQ8N9N8 165 aaKnown RBP16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 TANGO6Q9C0B7 1094 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 MCM9Q9NXL9 1143 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 STK17AQ9UEE5 414 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 NIP7Q9Y221 180 aaKnown RBP eCLIP16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 ATP6V0A2Q9Y487 856 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 NFS1Q9Y697 457 aa16.8■□□□□ 0.28
LYSMD4-211ENST00000604213 USP17L3A6NCW0 530 aa16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 USP17L4A6NCW7 530 aa16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 HPDP32754 393 aaPredicted RBP16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 HSD17B3P37058 310 aa16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 USP17L1Q7RTZ2 530 aa16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 KLHL7Q8IXQ5 586 aa16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 GLIS3Q8NEA6 775 aa16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 LUC7LQ9NQ29 371 aaKnown RBP16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 PHLPP1O60346 1717 aa16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 NAPAP54920 295 aa16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 UAP1Q16222 522 aaPredicted RBP16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 SLC18A3Q16572 532 aa16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 ARFGAP2Q8N6H7 521 aa16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 TBC1D5Q92609 795 aa16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 DYNLL2Q96FJ2 89 aa16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 SLC40A1Q9NP59 571 aa16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 PPANQ9NQ55 473 aaKnown RBP16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 SLC12A6Q9UHW9 1150 aa16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 MINPP1Q9UNW1 487 aa16.79■□□□□ 0.28
LYSMD4-211ENST00000604213 GOLGA6L10A6NI86 522 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 KLRK1P26718 216 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 LRRC41Q15345 812 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 C12orf60Q5U649 245 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 FOXR2Q6PJQ5 311 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 C3orf67Q6ZVT6 689 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 LSM14BQ9BX40 385 aaKnown RBP16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 BSDC1Q9NW68 430 aaPredicted RBP16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 MTMR7Q9Y216 660 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 GMNCA6NCL1 334 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 GCOM1H8Y6P7 765 aaPredicted RBP16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 CCDC172P0C7W6 258 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 MYZAPP0CAP1 466 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 GOLGA8HP0CJ92 632 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 PRDX5P30044 214 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 TXKP42681 527 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 PROM2Q8N271 834 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 C3orf20Q8ND61 904 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 LARP4BQ92615 738 aaKnown RBP16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 TSG101Q99816 390 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 PACSIN1Q9BY11 444 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 RIC8AQ9NPQ8 531 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 CCDC87Q9NVE4 849 aa16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 DDX20Q9UHI6 824 aaKnown RBP16.78■□□□□ 0.28
LYSMD4-211ENST00000604213 LAMB2P55268 1798 aa16.77■□□□□ 0.28
LYSMD4-211ENST00000604213 A0A087X0T9 212 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms