RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 MYOCDQ8IZQ8 938 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 CCDC51Q96ER9 411 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 CCDC17Q96LX7 622 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 AMNQ9BXJ7 453 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 NDST4Q9H3R1 872 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 NHEJ1Q9H9Q4 299 aaPredicted RBP12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 ZBTB21Q9ULJ3 1066 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 EDIL3O43854 480 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 CYLC1P35663 651 aaPredicted RBP12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 TRIM14Q14142 442 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 DCAF17Q5H9S7 520 aaPredicted RBP12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 FAM83BQ5T0W9 1011 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 CPXCR1Q8N123 301 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 OGFOD1Q8N543 542 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 ZDHHC15Q96MV8 337 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 LACRTQ9GZZ8 138 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 SUGCTQ9HAC7 445 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 RGL1Q9NZL6 768 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 TUBB4AP04350 444 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 BMP3P12645 472 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 STRIP1Q5VSL9 837 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 ESYT2A0FGR8 921 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 CTAGE15A4D2H0 777 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 LRRC10BA6NIK2 292 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 MED24O75448 989 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 CTAGE8P0CG41 777 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 CXCR5P32302 372 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 GABPB1Q06547 395 aaPredicted RBP12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 CTAGE6Q86UF2 777 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 TPH2Q8IWU9 490 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 CTAGE4Q8IX94 777 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 SH2D3AQ9BRG2 576 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.79□□□□□ -0.361e-6■■■■■ 140.6
ARHGEF1-220ENST00000600274 CASZ1Q86V15 1759 aa12.79□□□□□ -0.36
ARHGEF1-220ENST00000600274 A0A1W2PRG0 241 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 RRP1BQ14684 758 aaKnown RBP12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 SYDE2Q5VT97 1194 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 NAV1Q8NEY1 1877 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 ARFGAP3Q9NP61 516 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 FBXO28Q9NVF7 368 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 CDC23Q9UJX2 597 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 REXO2Q9Y3B8 237 aaKnown RBP12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 NHSQ6T4R5 1651 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 IGKV6D-41A0A0C4DH26 115 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 CLIC2O15247 247 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 BUB1O43683 1085 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 PNMA6AP0CW24 399 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 SNHG28P0DPA3 235 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 RNASE9P60153 205 aaKnown RBP12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 RAPGEF1Q13905 1077 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 CTTNQ14247 550 aaKnown RBP12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 DLGAP5Q15398 846 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 WDR59Q6PJI9 974 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 DNAAF5Q86Y56 855 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 TMEM39BQ9GZU3 492 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 DHX36Q9H2U1 1008 aaKnown RBP12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 STK17AQ9UEE5 414 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 SUGT1Q9Y2Z0 365 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 ITIH6Q6UXX5 1313 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 KLRG2A4D1S0 409 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 RCCD1A6NED2 376 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 ZNF185O15231 689 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 PRPF6O94906 941 aaKnown RBP12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 ATP1A1P05023 1023 aaKnown RBP12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 FXR2P51116 673 aaKnown RBP eCLIP12.78□□□□□ -0.361e-6■■■□□ 18.4
ARHGEF1-220ENST00000600274 KIF5AQ12840 1032 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 VWA3BQ502W6 1294 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 TMEM179Q6ZVK1 233 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 CCDC65Q8IXS2 484 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 P2RX7Q99572 595 aaKnown RBP12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 BHMT2Q9H2M3 363 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 IKZF4Q9H2S9 585 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 MLXIPQ9HAP2 919 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 BCS1LQ9Y276 419 aa12.78□□□□□ -0.36
ARHGEF1-220ENST00000600274 MYH1P12882 1939 aa12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 LRRC53A6NM62 1247 aa12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 RSPH10B2B2RC85 870 aa12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 ZBTB39O15060 712 aa12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 MYL1P05976 194 aa12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 RSPH10BP0C881 870 aa12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 EIF4A3P38919 411 aaKnown RBP12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 KCTD19Q17RG1 926 aaPredicted RBP12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 CC2D2BQ6DHV5 1058 aa12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 SRGAP1Q7Z6B7 1085 aa12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 NOA1Q8NC60 698 aaKnown RBP12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 AKT1S1Q96B36 256 aa12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 TMEM51Q9NW97 253 aa12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 MYO6Q9UM54 1294 aa12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 CAPN11Q9UMQ6 739 aa12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 MORC2Q9Y6X9 1032 aaPredicted RBP12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 MYH8P13535 1937 aa12.77□□□□□ -0.36
ARHGEF1-220ENST00000600274 KRT86O43790 486 aa12.77□□□□□ -0.37
ARHGEF1-220ENST00000600274 ARHGAP25P42331 645 aa12.77□□□□□ -0.37
ARHGEF1-220ENST00000600274 POLR2FP61218 127 aaKnown RBP12.77□□□□□ -0.37
ARHGEF1-220ENST00000600274 HERVK_113P62684 666 aa12.77□□□□□ -0.37
ARHGEF1-220ENST00000600274 FAM193AP78312 1265 aa12.77□□□□□ -0.37
ARHGEF1-220ENST00000600274 KSR1Q8IVT5 923 aa12.77□□□□□ -0.37
ARHGEF1-220ENST00000600274 ZNF507Q8TCN5 953 aa12.77□□□□□ -0.37
ARHGEF1-220ENST00000600274 LSM14BQ9BX40 385 aaKnown RBP12.77□□□□□ -0.37
ARHGEF1-220ENST00000600274 MAGEF1Q9HAY2 307 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms