RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CLEC1BQ9P126 229 aa20.85■□□□□ 0.93
SSBP4-207ENST00000600244 MYH7P12883 1935 aa20.84■□□□□ 0.93
SSBP4-207ENST00000600244 RSPH10B2B2RC85 870 aa20.84■□□□□ 0.93
SSBP4-207ENST00000600244 GH1P01241 217 aa20.84■□□□□ 0.93
SSBP4-207ENST00000600244 RSPH10BP0C881 870 aa20.84■□□□□ 0.93
SSBP4-207ENST00000600244 CTNNB1P35222 781 aa20.84■□□□□ 0.93
SSBP4-207ENST00000600244 RRP1P56182 461 aaKnown RBP20.84■□□□□ 0.93
SSBP4-207ENST00000600244 RPS6P62753 249 aaKnown RBP20.84■□□□□ 0.93
SSBP4-207ENST00000600244 TFAP4Q01664 338 aa20.84■□□□□ 0.93
SSBP4-207ENST00000600244 CAMK1Q14012 370 aa20.84■□□□□ 0.93
SSBP4-207ENST00000600244 RNF207Q6ZRF8 634 aa20.84■□□□□ 0.93
SSBP4-207ENST00000600244 RASGRP2Q7LDG7 609 aa20.84■□□□□ 0.93
SSBP4-207ENST00000600244 COASYQ13057 564 aa20.83■□□□□ 0.93
SSBP4-207ENST00000600244 DGKDQ16760 1214 aa20.83■□□□□ 0.93
SSBP4-207ENST00000600244 LY6KQ17RY6 165 aa20.83■□□□□ 0.93
SSBP4-207ENST00000600244 FIBCD1Q8N539 461 aa20.83■□□□□ 0.93
SSBP4-207ENST00000600244 KIF1BPQ96EK5 621 aa20.83■□□□□ 0.93
SSBP4-207ENST00000600244 ALG1Q9BT22 464 aa20.83■□□□□ 0.93
SSBP4-207ENST00000600244 OSBPL7Q9BZF2 842 aa20.83■□□□□ 0.93
SSBP4-207ENST00000600244 F2P00734 622 aa20.82■□□□□ 0.92
SSBP4-207ENST00000600244 ICAM3P32942 547 aa20.82■□□□□ 0.92
SSBP4-207ENST00000600244 NDUFV1P49821 464 aa20.82■□□□□ 0.92
SSBP4-207ENST00000600244 MFSD10Q14728 455 aa20.82■□□□□ 0.92
SSBP4-207ENST00000600244 BTNL9Q6UXG8 535 aa20.82■□□□□ 0.92
SSBP4-207ENST00000600244 SEPT8Q92599 483 aa20.82■□□□□ 0.92
SSBP4-207ENST00000600244 IL17RAQ96F46 866 aa20.82■□□□□ 0.92
SSBP4-207ENST00000600244 KATNAL1Q9BW62 490 aa20.82■□□□□ 0.92
SSBP4-207ENST00000600244 PHF7Q9BWX1 381 aaPredicted RBP20.82■□□□□ 0.92
SSBP4-207ENST00000600244 IFIH1Q9BYX4 1025 aaKnown RBP20.82■□□□□ 0.92
SSBP4-207ENST00000600244 RGS20O76081 388 aa20.81■□□□□ 0.92
SSBP4-207ENST00000600244 PDGFBP01127 241 aaPredicted RBP20.81■□□□□ 0.92
SSBP4-207ENST00000600244 MMP1P03956 469 aa20.81■□□□□ 0.92
SSBP4-207ENST00000600244 KIAA0753Q2KHM9 967 aa20.81■□□□□ 0.92
SSBP4-207ENST00000600244 TTBK2Q6IQ55 1244 aa20.81■□□□□ 0.92
SSBP4-207ENST00000600244 SERINC5Q86VE9 423 aa20.81■□□□□ 0.92
SSBP4-207ENST00000600244 CLP1Q92989 425 aaKnown RBP20.81■□□□□ 0.92
SSBP4-207ENST00000600244 OSBP2Q969R2 916 aa20.81■□□□□ 0.92
SSBP4-207ENST00000600244 RIPOR3Q96MK2 946 aa20.81■□□□□ 0.92
SSBP4-207ENST00000600244 INCENPQ9NQS7 918 aa20.81■□□□□ 0.92
SSBP4-207ENST00000600244 EPG5Q9HCE0 2579 aa20.81■□□□□ 0.92
SSBP4-207ENST00000600244 B4DLN1 442 aa20.8■□□□□ 0.92
SSBP4-207ENST00000600244 KRT37O76014 449 aa20.8■□□□□ 0.92
SSBP4-207ENST00000600244 SLC16A2P36021 539 aa20.8■□□□□ 0.92
SSBP4-207ENST00000600244 THPOP40225 353 aa20.8■□□□□ 0.92
SSBP4-207ENST00000600244 MRPL12P52815 198 aaKnown RBP20.8■□□□□ 0.92
SSBP4-207ENST00000600244 CHST3Q7LGC8 479 aa20.8■□□□□ 0.92
SSBP4-207ENST00000600244 EFHBQ8N7U6 833 aa20.8■□□□□ 0.92
SSBP4-207ENST00000600244 EMID1Q96A84 441 aaPredicted RBP20.8■□□□□ 0.92
SSBP4-207ENST00000600244 IL17RBQ9NRM6 502 aa20.8■□□□□ 0.92
SSBP4-207ENST00000600244 RCAN3Q9UKA8 241 aa20.8■□□□□ 0.92
SSBP4-207ENST00000600244 RWDD3Q9Y3V2 267 aa20.8■□□□□ 0.92
SSBP4-207ENST00000600244 USP15Q9Y4E8 981 aaPredicted RBP20.8■□□□□ 0.92
SSBP4-207ENST00000600244 MED19A0JLT2 244 aaPredicted RBP20.79■□□□□ 0.92
SSBP4-207ENST00000600244 KDM4AO75164 1064 aa20.79■□□□□ 0.92
SSBP4-207ENST00000600244 TDO2P48775 406 aa20.79■□□□□ 0.92
SSBP4-207ENST00000600244 PTPN21Q16825 1174 aa20.79■□□□□ 0.92
SSBP4-207ENST00000600244 PPP4R3BQ5MIZ7 849 aa20.79■□□□□ 0.92
SSBP4-207ENST00000600244 ADSSL1Q8N142 457 aa20.79■□□□□ 0.92
SSBP4-207ENST00000600244 STX8Q9UNK0 236 aa20.79■□□□□ 0.92
SSBP4-207ENST00000600244 VPS13AQ96RL7 3174 aa20.79■□□□□ 0.92
SSBP4-207ENST00000600244 RLBP1P12271 317 aa20.78■□□□□ 0.92
SSBP4-207ENST00000600244 NOVP48745 357 aa20.78■□□□□ 0.92
SSBP4-207ENST00000600244 SYDE2Q5VT97 1194 aa20.78■□□□□ 0.92
SSBP4-207ENST00000600244 SEPT14Q6ZU15 432 aa20.78■□□□□ 0.92
SSBP4-207ENST00000600244 ITPRIPQ8IWB1 547 aa20.78■□□□□ 0.92
SSBP4-207ENST00000600244 DCAF4Q8WV16 495 aa20.78■□□□□ 0.92
SSBP4-207ENST00000600244 NKD2Q969F2 451 aaPredicted RBP20.78■□□□□ 0.92
SSBP4-207ENST00000600244 RPGRIP1Q96KN7 1286 aa20.78■□□□□ 0.92
SSBP4-207ENST00000600244 RC3H2Q9HBD1 1191 aaKnown RBP20.78■□□□□ 0.92
SSBP4-207ENST00000600244 DDX41Q9UJV9 622 aaKnown RBP20.78■□□□□ 0.92
SSBP4-207ENST00000600244 ZNF286BP0CG31 522 aa20.77■□□□□ 0.92
SSBP4-207ENST00000600244 HOXD8P13378 290 aaPredicted RBP20.77■□□□□ 0.92
SSBP4-207ENST00000600244 ADGRD2Q7Z7M1 963 aa20.77■□□□□ 0.92
SSBP4-207ENST00000600244 IFNL3Q8IZI9 196 aa20.77■□□□□ 0.92
SSBP4-207ENST00000600244 PLVAPQ9BX97 442 aa20.77■□□□□ 0.92
SSBP4-207ENST00000600244 PLAGL2Q9UPG8 496 aa20.77■□□□□ 0.92
SSBP4-207ENST00000600244 KMT2BQ9UMN6 2715 aaPredicted RBP20.77■□□□□ 0.91
SSBP4-207ENST00000600244 GLP2RO95838 553 aa20.76■□□□□ 0.91
SSBP4-207ENST00000600244 ATF7P17544 494 aaPredicted RBP20.76■□□□□ 0.91
SSBP4-207ENST00000600244 GNAT2P19087 354 aa20.76■□□□□ 0.91
SSBP4-207ENST00000600244 DNAJB1P25685 340 aa20.76■□□□□ 0.91
SSBP4-207ENST00000600244 CCDC96Q2M329 555 aa20.76■□□□□ 0.91
SSBP4-207ENST00000600244 FRMD5Q7Z6J6 570 aa20.76■□□□□ 0.91
SSBP4-207ENST00000600244 DHX37Q8IY37 1157 aaKnown RBP20.76■□□□□ 0.91
SSBP4-207ENST00000600244 RGS22Q8NE09 1264 aa20.76■□□□□ 0.91
SSBP4-207ENST00000600244 PPTC7Q8NI37 304 aa20.76■□□□□ 0.91
SSBP4-207ENST00000600244 SUSD6Q92537 303 aa20.76■□□□□ 0.91
SSBP4-207ENST00000600244 APPBP2Q92624 585 aa20.76■□□□□ 0.91
SSBP4-207ENST00000600244 PNMA2Q9UL42 364 aa20.76■□□□□ 0.91
SSBP4-207ENST00000600244 ZNF292O60281 2723 aa20.75■□□□□ 0.91
SSBP4-207ENST00000600244 PATL2C9JE40 543 aaKnown RBP20.75■□□□□ 0.91
SSBP4-207ENST00000600244 GPAA1O43292 621 aa20.75■□□□□ 0.91
SSBP4-207ENST00000600244 NMT2O60551 498 aa20.75■□□□□ 0.91
SSBP4-207ENST00000600244 LAMC2Q13753 1193 aa20.75■□□□□ 0.91
SSBP4-207ENST00000600244 TMEM105Q8N8V8 129 aa20.75■□□□□ 0.91
SSBP4-207ENST00000600244 PPP2R3CQ969Q6 453 aa20.75■□□□□ 0.91
SSBP4-207ENST00000600244 BCL11AQ9H165 835 aa20.75■□□□□ 0.91
SSBP4-207ENST00000600244 MTMR7Q9Y216 660 aa20.75■□□□□ 0.91
SSBP4-207ENST00000600244 ADGRA3Q8IWK6 1321 aa20.75■□□□□ 0.91
SSBP4-207ENST00000600244 NCOR2Q9Y618 2525 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms