RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 POLD4Q9HCU8 107 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 MTMR4Q9NYA4 1195 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 THSD7AQ9UPZ6 1657 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 SPATA31A6Q5VVP1 1343 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 ROBO3Q96MS0 1386 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 DDX60LQ5H9U9 1706 aaKnown RBP16.98■□□□□ 0.31
ZNF541-205ENST00000595558 DNA2P51530 1060 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 DNAJC21Q5F1R6 531 aaKnown RBP16.98■□□□□ 0.31
ZNF541-205ENST00000595558 KCNK18Q7Z418 384 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 NEK8Q86SG6 692 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 FAM114A1Q8IWE2 563 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 TRIM58Q8NG06 486 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 MTMR8Q96EF0 704 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 PNMA5Q96PV4 448 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 DEF6Q9H4E7 631 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 KANSL2Q9H9L4 492 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 MAST2Q6P0Q8 1798 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 AKR1B10O60218 316 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 CDK17Q00537 523 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 FIGNQ5HY92 759 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 CDC42EP5Q6NZY7 148 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 CUEDC2Q9H467 287 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 FAM184BQ9ULE4 1060 aa16.98■□□□□ 0.31
ZNF541-205ENST00000595558 GOLGA6CA6NDK9 693 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 USP17L10C9JJH3 530 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 PPFIA4O75335 1185 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 TACC1O75410 805 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 GOLGA6DP0CG33 693 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 HOXA10P31260 410 aaPredicted RBP16.97■□□□□ 0.31
ZNF541-205ENST00000595558 RBM5P52756 815 aaKnown RBP eCLIP16.97■□□□□ 0.31
ZNF541-205ENST00000595558 RASSF7Q02833 373 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 KCTD19Q17RG1 926 aaPredicted RBP16.97■□□□□ 0.31
ZNF541-205ENST00000595558 GALNT17Q6IS24 598 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 CNNM4Q6P4Q7 775 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 PACS2Q86VP3 889 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 MMGT1Q8N4V1 131 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 CCDC47Q96A33 483 aaKnown RBP16.97■□□□□ 0.31
ZNF541-205ENST00000595558 GOLGA6AQ9NYA3 693 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 SEC63Q9UGP8 760 aaKnown RBP16.97■□□□□ 0.31
ZNF541-205ENST00000595558 G3V3G9 751 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 HNRNPH3P31942 346 aaKnown RBP16.97■□□□□ 0.31
ZNF541-205ENST00000595558 SLC1A4P43007 532 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 TNNI2P48788 182 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 DCAF8Q5TAQ9 597 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 KRT25Q7Z3Z0 450 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 BAP1Q92560 729 aa16.97■□□□□ 0.31
ZNF541-205ENST00000595558 ZNF831Q5JPB2 1677 aa16.96■□□□□ 0.31
ZNF541-205ENST00000595558 GAKO14976 1311 aa16.96■□□□□ 0.31
ZNF541-205ENST00000595558 ZSCAN5CA6NGD5 496 aaPredicted RBP16.96■□□□□ 0.31
ZNF541-205ENST00000595558 USO1O60763 962 aaKnown RBP16.96■□□□□ 0.31
ZNF541-205ENST00000595558 ADRA2BP18089 450 aa16.96■□□□□ 0.31
ZNF541-205ENST00000595558 CHRNA5P30532 468 aa16.96■□□□□ 0.31
ZNF541-205ENST00000595558 HAUS3Q68CZ6 603 aa16.96■□□□□ 0.31
ZNF541-205ENST00000595558 C15orf52Q6ZUT6 534 aaKnown RBP16.96■□□□□ 0.31
ZNF541-205ENST00000595558 SV2BQ7L1I2 683 aa16.96■□□□□ 0.31
ZNF541-205ENST00000595558 FAM76AQ8TAV0 307 aa16.96■□□□□ 0.31
ZNF541-205ENST00000595558 TSGA10Q9BZW7 698 aa16.96■□□□□ 0.31
ZNF541-205ENST00000595558 NLRC4Q9NPP4 1024 aa16.96■□□□□ 0.31
ZNF541-205ENST00000595558 RBM12Q9NTZ6 932 aaKnown RBP16.96■□□□□ 0.31
ZNF541-205ENST00000595558 MAGEA1P43355 309 aa16.96■□□□□ 0.3
ZNF541-205ENST00000595558 ECM1Q16610 540 aa16.96■□□□□ 0.3
ZNF541-205ENST00000595558 APOBEC3HQ6NTF7 200 aaKnown RBP16.96■□□□□ 0.3
ZNF541-205ENST00000595558 ARL8AQ96BM9 186 aa16.96■□□□□ 0.3
ZNF541-205ENST00000595558 TLR10Q9BXR5 811 aa16.96■□□□□ 0.3
ZNF541-205ENST00000595558 DNAJC18Q9H819 358 aa16.96■□□□□ 0.3
ZNF541-205ENST00000595558 SCAF8Q9UPN6 1271 aaKnown RBP16.96■□□□□ 0.3
ZNF541-205ENST00000595558 ATP6V0A2Q9Y487 856 aa16.96■□□□□ 0.3
ZNF541-205ENST00000595558 LY75O60449 1722 aa16.96■□□□□ 0.3
ZNF541-205ENST00000595558 USP17L15C9J2P7 530 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 USP17L13C9JLJ4 530 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 USP17L11C9JVI0 530 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 USP17L18D6R9N7 530 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 USP17L22D6RA61 530 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 USP17L17D6RBQ6 530 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 USP17L19D6RCP7 530 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 USP17L20D6RJB6 530 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 SHMT1P34896 483 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 IRAK1P51617 712 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 USP17L24Q0WX57 530 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 KCNMA1Q12791 1236 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 SOGA3Q5TF21 947 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 USP17L6PQ6QN14 398 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 ADGRF4Q8IZF3 695 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 REXO1Q8N1G1 1221 aaKnown RBP16.95■□□□□ 0.3
ZNF541-205ENST00000595558 CALML4Q96GE6 196 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 SPZ1Q9BXG8 430 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 FGFBP2Q9BYJ0 223 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 MAGEF1Q9HAY2 307 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 C6orf50Q9HD87 102 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 ADAMTSL1Q8N6G6 1762 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 ESYT3A0FGR9 886 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 DDTLA6NHG4 134 aaPredicted RBP16.95■□□□□ 0.3
ZNF541-205ENST00000595558 CORO7P57737 925 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 SLC30A10Q6XR72 485 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 LRRC55Q6ZSA7 311 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 JMJD4Q9H9V9 463 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 SERPINB13Q9UIV8 391 aa16.95■□□□□ 0.3
ZNF541-205ENST00000595558 APBA3O96018 575 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 CCT5P48643 541 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 AMPD3Q01432 767 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms