RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ITGB5P18084 799 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 ICAM3P32942 547 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 ADCY7P51828 1080 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 AK2P54819 239 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 STK3Q13188 491 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 CELF3Q5SZQ8 465 aaKnown RBP12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 MYSM1Q5VVJ2 828 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 XRRA1Q6P2D8 792 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 KCNV1Q6PIU1 500 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 PPP1R13LQ8WUF5 828 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 PGBD1Q96JS3 809 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 SLC26A6Q9BXS9 759 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 TMEM260Q9NX78 707 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 TET1Q8NFU7 2136 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 MROH7Q68CQ1 1323 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 ESYT2A0FGR8 921 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 SPDYE3A6NKU9 549 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 DCDC2CA8MYV0 355 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 DTNBO60941 627 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 LARGE1O95461 756 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 TGFB3P10600 412 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 SCRN1Q12765 414 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 HSDL1Q3SXM5 330 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 TEX2Q8IWB9 1127 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 DHX37Q8IY37 1157 aaKnown RBP12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 PPTC7Q8NI37 304 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 KAT2BQ92831 832 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 BADQ92934 168 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 KIF2CQ99661 725 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 MTG1Q9BT17 334 aaPredicted RBP12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 ANO3Q9BYT9 981 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 ZMYND12Q9H0C1 365 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 PRKAG2Q9UGJ0 569 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 TELO2Q9Y4R8 837 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 UBIAD1Q9Y5Z9 338 aa12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 MYH9P35579 1960 aaKnown RBP12.6□□□□□ -0.39
SHKBP1-206ENST00000595523 FIBPO43427 364 aa12.59□□□□□ -0.39
SHKBP1-206ENST00000595523 B4GALT4O60513 344 aa12.59□□□□□ -0.39
SHKBP1-206ENST00000595523 PFKFB2O60825 505 aa12.59□□□□□ -0.39
SHKBP1-206ENST00000595523 EIF5BO60841 1220 aaKnown RBP12.59□□□□□ -0.39
SHKBP1-206ENST00000595523 FXR1P51114 621 aaKnown RBP eCLIP12.59□□□□□ -0.39
SHKBP1-206ENST00000595523 LAMC2Q13753 1193 aa12.59□□□□□ -0.39
SHKBP1-206ENST00000595523 NBPF20Q3BBV1 942 aa12.59□□□□□ -0.39
SHKBP1-206ENST00000595523 GNPTABQ3T906 1256 aa12.59□□□□□ -0.39
SHKBP1-206ENST00000595523 BRDTQ58F21 947 aaPredicted RBP12.59□□□□□ -0.39
SHKBP1-206ENST00000595523 CRYGNQ8WXF5 182 aa12.59□□□□□ -0.39
SHKBP1-206ENST00000595523 TRPV6Q9H1D0 765 aa12.59□□□□□ -0.39
SHKBP1-206ENST00000595523 TMEM39AQ9NV64 488 aa12.59□□□□□ -0.39
SHKBP1-206ENST00000595523 VPS54Q9P1Q0 977 aa12.59□□□□□ -0.39
SHKBP1-206ENST00000595523 GBF1Q92538 1859 aa12.59□□□□□ -0.39
SHKBP1-206ENST00000595523 A0A1W2PPC1 479 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 KPNA6O60684 536 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 ATP9AO75110 1047 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 CTDNEP1O95476 244 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 F2P00734 622 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 FOSP01100 380 aaPredicted RBP12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 ZNF286BP0CG31 522 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 KCNA2P16389 499 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 SREBF1P36956 1147 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 AP3B2Q13367 1082 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 DGKDQ16760 1214 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 JAKMIP3Q5VZ66 844 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 CYP2W1Q8TAV3 490 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 GPRASP2Q96D09 838 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 SPATA33Q96N06 139 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 AIFM3Q96NN9 605 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 CTAGE1Q96RT6 745 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 UBE2OQ9C0C9 1292 aaKnown RBP12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 TRMT13Q9NUP7 481 aaKnown RBP12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 CHD9Q3L8U1 2897 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 UMODL1Q5DID0 1318 aa12.58□□□□□ -0.4
SHKBP1-206ENST00000595523 HAS3O00219 553 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 CPLX1O14810 134 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 TIMP1P01033 207 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 RAG1P15918 1043 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 NEK4P51957 841 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 EPHB4P54760 987 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 AKAP17AQ02040 695 aaKnown RBP12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 SSRP1Q08945 709 aaKnown RBP12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 ST3GAL1Q11201 340 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 ANKRD1Q15327 319 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 NPY5RQ15761 445 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 ME3Q16798 604 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 NFRKBQ6P4R8 1299 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 METTL7BQ6UX53 244 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 CYFIP1Q7L576 1253 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 NLRX1Q86UT6 975 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 TDHQ8IZJ6 230 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 RASGRP4Q8TDF6 673 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 LBHD1Q9BQE6 289 aaPredicted RBP12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 SENP7Q9BQF6 1050 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 C16orf70Q9BSU1 422 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 SEZ6LQ9BYH1 1024 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 GLT8D2Q9H1C3 349 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 SLKQ9H2G2 1235 aaPredicted RBP12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 MLXIPQ9HAP2 919 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 C6orf50Q9HD87 102 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 JADE2Q9NQC1 790 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 SH3GLB2Q9NR46 395 aa12.57□□□□□ -0.4
SHKBP1-206ENST00000595523 CDH23Q9H251 3354 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms