RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 MMP3P08254 477 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 CALML3P27482 149 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 NT5C2P49902 561 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 SNAP25P60880 206 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 TCF15Q12870 199 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 MKRN4PQ13434 485 aaPredicted RBP11.95□□□□□ -0.5
SDF2-209ENST00000591903 SMAD4Q13485 552 aaKnown RBP11.95□□□□□ -0.5
SDF2-209ENST00000591903 DGKDQ16760 1214 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 TCTN1Q2MV58 587 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 CTC1Q2NKJ3 1217 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 IER5LQ5T953 404 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.95□□□□□ -0.5
SDF2-209ENST00000591903 TRIM67Q6ZTA4 783 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 FBXO11Q86XK2 927 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 TMEM192Q8IY95 271 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 DCAF4Q8WV16 495 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 YME1L1Q96TA2 773 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 NACAP1Q9BZK3 213 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 LMAN2LQ9H0V9 348 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 EPB41L4AQ9HCS5 686 aaPredicted RBP11.95□□□□□ -0.5
SDF2-209ENST00000591903 STX8Q9UNK0 236 aa11.95□□□□□ -0.5
SDF2-209ENST00000591903 CCDC171Q6TFL3 1326 aa11.94□□□□□ -0.5
SDF2-209ENST00000591903 PATL2C9JE40 543 aaKnown RBP11.94□□□□□ -0.5
SDF2-209ENST00000591903 STXBP3O00186 592 aa11.94□□□□□ -0.5
SDF2-209ENST00000591903 SGSM2O43147 1006 aa11.94□□□□□ -0.5
SDF2-209ENST00000591903 LTBRP36941 435 aa11.94□□□□□ -0.5
SDF2-209ENST00000591903 NMIQ13287 307 aaPredicted RBP11.94□□□□□ -0.5
SDF2-209ENST00000591903 ALX1Q15699 326 aa11.94□□□□□ -0.5
SDF2-209ENST00000591903 CCDC96Q2M329 555 aa11.94□□□□□ -0.5
SDF2-209ENST00000591903 ZNF618Q5T7W0 954 aa11.94□□□□□ -0.5
SDF2-209ENST00000591903 BTNL9Q6UXG8 535 aa11.94□□□□□ -0.5
SDF2-209ENST00000591903 SLC30A10Q6XR72 485 aa11.94□□□□□ -0.5
SDF2-209ENST00000591903 FBXL6Q8N531 539 aa11.94□□□□□ -0.5
SDF2-209ENST00000591903 AFG1LQ8WV93 481 aa11.94□□□□□ -0.5
SDF2-209ENST00000591903 KAT2BQ92831 832 aa11.94□□□□□ -0.5
SDF2-209ENST00000591903 DSCC1Q9BVC3 393 aa11.94□□□□□ -0.5
SDF2-209ENST00000591903 MAF1Q9H063 256 aa11.94□□□□□ -0.5
SDF2-209ENST00000591903 HDAC6Q9UBN7 1215 aa11.94□□□□□ -0.5
SDF2-209ENST00000591903 RWDD3Q9Y3V2 267 aa11.94□□□□□ -0.5
SDF2-209ENST00000591903 PLXNA3P51805 1871 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 CACNA1AO00555 2505 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 A0A0D9SFI3 127 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 TSPY2A6NKD2 308 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 ARIH2O95376 493 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 RB1P06400 928 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 RPS6P62753 249 aaKnown RBP11.93□□□□□ -0.5
SDF2-209ENST00000591903 TRIM71Q2Q1W2 868 aaKnown RBP11.93□□□□□ -0.5
SDF2-209ENST00000591903 PLEKHG4Q58EX7 1191 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 SYDE2Q5VT97 1194 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 CCDC62Q6P9F0 684 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 TRAF7Q6Q0C0 670 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 ERMP1Q7Z2K6 904 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 IFNL3Q8IZI9 196 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 DBF4BQ8NFT6 615 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 CLEC4DQ8WXI8 215 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 TOP1MTQ969P6 601 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 C11orf84Q9BUA3 381 aaPredicted RBP11.93□□□□□ -0.5
SDF2-209ENST00000591903 CD207Q9UJ71 328 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 CACNA1HO95180 2353 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 SPTBN4Q9H254 2564 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 LAMA4Q16363 1823 aa11.93□□□□□ -0.5
SDF2-209ENST00000591903 WDR19Q8NEZ3 1342 aa11.92□□□□□ -0.5
SDF2-209ENST00000591903 C5orf67F2Z3F1 127 aa11.92□□□□□ -0.5
SDF2-209ENST00000591903 F2P00734 622 aa11.92□□□□□ -0.5
SDF2-209ENST00000591903 PSEN2P49810 448 aa11.92□□□□□ -0.5
SDF2-209ENST00000591903 NUBP1P53384 320 aa11.92□□□□□ -0.5
SDF2-209ENST00000591903 ZXDAP98168 799 aa11.92□□□□□ -0.5
SDF2-209ENST00000591903 ARHGAP1Q07960 439 aa11.92□□□□□ -0.5
SDF2-209ENST00000591903 MBTPS1Q14703 1052 aa11.92□□□□□ -0.5
SDF2-209ENST00000591903 CWC27Q6UX04 472 aaKnown RBP11.92□□□□□ -0.5
SDF2-209ENST00000591903 SKAP1Q86WV1 359 aa11.92□□□□□ -0.5
SDF2-209ENST00000591903 SEPT8Q92599 483 aa11.92□□□□□ -0.5
SDF2-209ENST00000591903 EMID1Q96A84 441 aaPredicted RBP11.92□□□□□ -0.5
SDF2-209ENST00000591903 CHMP4CQ96CF2 233 aa11.92□□□□□ -0.5
SDF2-209ENST00000591903 FAM227BQ96M60 508 aa11.92□□□□□ -0.5
SDF2-209ENST00000591903 ESYT1Q9BSJ8 1104 aa11.92□□□□□ -0.5
SDF2-209ENST00000591903 MYH6P13533 1939 aa11.92□□□□□ -0.5
SDF2-209ENST00000591903 PTPRZ1P23471 2315 aaPredicted RBP11.91□□□□□ -0.5
SDF2-209ENST00000591903 RSPH10B2B2RC85 870 aa11.91□□□□□ -0.5
SDF2-209ENST00000591903 M0R2C6 588 aa11.91□□□□□ -0.5
SDF2-209ENST00000591903 HAS3O00219 553 aa11.91□□□□□ -0.5
SDF2-209ENST00000591903 REC8O95072 547 aa11.91□□□□□ -0.5
SDF2-209ENST00000591903 RSPH10BP0C881 870 aa11.91□□□□□ -0.5
SDF2-209ENST00000591903 PCP11498 1178 aaKnown RBP11.91□□□□□ -0.5
SDF2-209ENST00000591903 PPARAQ07869 468 aa11.91□□□□□ -0.5
SDF2-209ENST00000591903 HYAL1Q12794 435 aa11.91□□□□□ -0.5
SDF2-209ENST00000591903 MFSD10Q14728 455 aa11.91□□□□□ -0.5
SDF2-209ENST00000591903 KIAA0753Q2KHM9 967 aa11.91□□□□□ -0.5
SDF2-209ENST00000591903 DHX37Q8IY37 1157 aaKnown RBP11.91□□□□□ -0.5
SDF2-209ENST00000591903 RGS22Q8NE09 1264 aa11.91□□□□□ -0.5
SDF2-209ENST00000591903 ATOH1Q92858 354 aaPredicted RBP11.91□□□□□ -0.5
SDF2-209ENST00000591903 PPP2R3CQ969Q6 453 aa11.91□□□□□ -0.5
SDF2-209ENST00000591903 ALG1Q9BT22 464 aa11.91□□□□□ -0.5
SDF2-209ENST00000591903 NAPBQ9H115 298 aa11.91□□□□□ -0.5
SDF2-209ENST00000591903 ZFHX2Q9C0A1 2572 aaPredicted RBP11.9□□□□□ -0.5
SDF2-209ENST00000591903 PROB1E7EW31 1015 aa11.9□□□□□ -0.5
SDF2-209ENST00000591903 CAND2O75155 1236 aa11.9□□□□□ -0.5
SDF2-209ENST00000591903 EYA4O95677 639 aa11.9□□□□□ -0.5
SDF2-209ENST00000591903 HSPD1P10809 573 aaKnown RBP11.9□□□□□ -0.5
SDF2-209ENST00000591903 CTNNB1P35222 781 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms