RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 ANP32CO43423 234 aa4.36□□□□□ -1.71
ZNF540-207ENST00000589285 MLANAQ16655 118 aa4.36□□□□□ -1.71
ZNF540-207ENST00000589285 MPZL3Q6UWV2 235 aa4.36□□□□□ -1.71
ZNF540-207ENST00000589285 ZNF605Q86T29 641 aa4.36□□□□□ -1.71
ZNF540-207ENST00000589285 EXOC2Q96KP1 924 aa4.36□□□□□ -1.71
ZNF540-207ENST00000589285 CDK19Q9BWU1 502 aa4.36□□□□□ -1.71
ZNF540-207ENST00000589285 MARCH2Q9P0N8 246 aa4.36□□□□□ -1.71
ZNF540-207ENST00000589285 MRPL42Q9Y6G3 142 aaKnown RBP4.36□□□□□ -1.71
ZNF540-207ENST00000589285 AHDC1Q5TGY3 1603 aaPredicted RBP4.36□□□□□ -1.71
ZNF540-207ENST00000589285 TET3O43151 1660 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 FADS2P1A8MWK0 482 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 AURKAO14965 403 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 PPP1R12AO14974 1030 aaPredicted RBP4.35□□□□□ -1.71
ZNF540-207ENST00000589285 ZNF205O95201 554 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 MC3RP41968 323 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 MVKQ03426 396 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 SLC14A2Q15849 920 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 HSF5Q4G112 596 aaPredicted RBP4.35□□□□□ -1.71
ZNF540-207ENST00000589285 ANKRD39Q53RE8 183 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 TNNI3KQ59H18 835 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 TMPRSS7Q7RTY8 843 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 STK32CQ86UX6 486 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 AGBL5Q8NDL9 886 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 NGDNQ8NEJ9 315 aaKnown RBP4.35□□□□□ -1.71
ZNF540-207ENST00000589285 KIRREL1Q96J84 757 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 MRGPRX3Q96LB0 322 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 ORAI2Q96SN7 254 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 JAM3Q9BX67 310 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 BACE2Q9Y5Z0 518 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 MED1Q15648 1581 aaPredicted RBP4.35□□□□□ -1.71
ZNF540-207ENST00000589285 SPHKAPQ2M3C7 1700 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 KDM2BQ8NHM5 1336 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 C7orf72A4D263 438 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 U2SURPO15042 1029 aaKnown RBP4.35□□□□□ -1.71
ZNF540-207ENST00000589285 EEPD1Q7L9B9 569 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 TRIM59Q8IWR1 403 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 ABHD4Q8TB40 342 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 C1orf159Q96HA4 380 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 APBA2Q99767 749 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 GBP3Q9H0R5 595 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 FGF10O15520 208 aaPredicted RBP4.35□□□□□ -1.71
ZNF540-207ENST00000589285 PRODHO43272 600 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 NTRK3Q16288 839 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 KCNMB1Q16558 191 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 USP53Q70EK8 1073 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 LTV1Q96GA3 475 aaPredicted RBP4.35□□□□□ -1.71
ZNF540-207ENST00000589285 CHAMP1Q96JM3 812 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 TESK2Q96S53 571 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 RBPJLQ9UBG7 517 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 ZNF281Q9Y2X9 895 aa4.35□□□□□ -1.71
ZNF540-207ENST00000589285 COL22A1Q8NFW1 1626 aaPredicted RBP4.34□□□□□ -1.71
ZNF540-207ENST00000589285 UTRNP46939 3433 aa4.34□□□□□ -1.71
ZNF540-207ENST00000589285 NOP56O00567 594 aaKnown RBP4.34□□□□□ -1.71
ZNF540-207ENST00000589285 DLX3O60479 287 aa4.34□□□□□ -1.71
ZNF540-207ENST00000589285 POU4F1Q01851 419 aa4.34□□□□□ -1.71
ZNF540-207ENST00000589285 PHF19Q5T6S3 580 aa4.34□□□□□ -1.71
ZNF540-207ENST00000589285 GIMAP6Q6P9H5 292 aa4.34□□□□□ -1.71
ZNF540-207ENST00000589285 NLRP10Q86W26 655 aa4.34□□□□□ -1.71
ZNF540-207ENST00000589285 ZSWIM9Q86XI8 627 aa4.34□□□□□ -1.71
ZNF540-207ENST00000589285 KREMEN2Q8NCW0 462 aa4.34□□□□□ -1.71
ZNF540-207ENST00000589285 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.34□□□□□ -1.71
ZNF540-207ENST00000589285 COPS5Q92905 334 aa4.34□□□□□ -1.71
ZNF540-207ENST00000589285 KCNJ15Q99712 375 aa4.34□□□□□ -1.71
ZNF540-207ENST00000589285 KNSTRNQ9Y448 316 aa4.34□□□□□ -1.71
ZNF540-207ENST00000589285 TRPM2O94759 1503 aa4.34□□□□□ -1.71
ZNF540-207ENST00000589285 NPHP3-ACAD11A0A0J9YXS1 232 aa4.34□□□□□ -1.72
ZNF540-207ENST00000589285 MYOCOSA0A1B0GUC4 107 aa4.34□□□□□ -1.72
ZNF540-207ENST00000589285 LRRC10BA6NIK2 292 aa4.34□□□□□ -1.72
ZNF540-207ENST00000589285 BCL6P41182 706 aa4.34□□□□□ -1.72
ZNF540-207ENST00000589285 RBL2Q08999 1139 aa4.34□□□□□ -1.72
ZNF540-207ENST00000589285 MCTP1Q6DN14 999 aa4.34□□□□□ -1.72
ZNF540-207ENST00000589285 JAMLQ86YT9 394 aa4.34□□□□□ -1.72
ZNF540-207ENST00000589285 IRF2BP1Q8IU81 584 aa4.34□□□□□ -1.72
ZNF540-207ENST00000589285 PPIL6Q8IXY8 311 aa4.34□□□□□ -1.72
ZNF540-207ENST00000589285 RCBTB1Q8NDN9 531 aa4.34□□□□□ -1.72
ZNF540-207ENST00000589285 OR6P1Q8NGX9 317 aa4.34□□□□□ -1.72
ZNF540-207ENST00000589285 PTCHD1Q96NR3 888 aa4.34□□□□□ -1.72
ZNF540-207ENST00000589285 NSUN3Q9H649 340 aaKnown RBP4.34□□□□□ -1.72
ZNF540-207ENST00000589285 MSRB2Q9Y3D2 182 aa4.34□□□□□ -1.72
ZNF540-207ENST00000589285 SETD1AO15047 1707 aaKnown RBP4.34□□□□□ -1.72
ZNF540-207ENST00000589285 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.34□□□□□ -1.72
ZNF540-207ENST00000589285 FUCA1P04066 466 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 GSNP06396 782 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 PDE6BP35913 854 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 JAZF1Q86VZ6 243 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 OSBP2Q969R2 916 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 DRC1Q96MC2 740 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 NKX2-4Q9H2Z4 354 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 SLC12A7Q9Y666 1083 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 SCAF11Q99590 1463 aaKnown RBP4.33□□□□□ -1.72
ZNF540-207ENST00000589285 NTRK1P04629 796 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 HSPA1LP34931 641 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 GFRA1P56159 465 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 NCAPHQ15003 741 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 TKFCQ3LXA3 575 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 OGFOD2Q6N063 350 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 SLCO6A1Q86UG4 719 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 FCRL2Q96LA5 508 aaPredicted RBP4.33□□□□□ -1.72
ZNF540-207ENST00000589285 OSBPL2Q9H1P3 480 aa4.33□□□□□ -1.72
ZNF540-207ENST00000589285 STRCP1A6NGW2 1772 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms