RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 TC2NQ8N9U0 490 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 HOOK2Q96ED9 719 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 CLMNQ96JQ2 1002 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 PSTPIP2Q9H939 334 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 TRMT1Q9NXH9 659 aaKnown RBP11.14□□□□□ -0.63
VPS25-202ENST00000589219 LRWD1Q9UFC0 647 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 GDAQ9Y2T3 454 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 BAZ2BQ9UIF8 2168 aaKnown RBP11.14□□□□□ -0.63
VPS25-202ENST00000589219 PVALEFA0A1B0GWK0 134 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 LRRC10BA6NIK2 292 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 TCP10L2B9ZVM9 353 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 SLC37A4O43826 429 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 MFAP3LO75121 409 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 FECHP22830 423 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 CCNE1P24864 410 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 TECP42680 631 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 TXKP42681 527 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 PRCPP42785 496 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 CACNB3P54284 484 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 SEPT2Q15019 361 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 UBE2SQ16763 222 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 HSP90AA4PQ58FG1 418 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 TCP11X2Q5H9J9 407 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 SYDE2Q5VT97 1194 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 FKBP1CQ5VVH2 108 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 FBXO46Q6PJ61 603 aaPredicted RBP11.13□□□□□ -0.63
VPS25-202ENST00000589219 FOXR2Q6PJQ5 311 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 BTNL9Q6UXG8 535 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 SV2BQ7L1I2 683 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 SNX29Q8TEQ0 813 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 TRIM47Q96LD4 638 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 MMTAG2Q9BU76 263 aaKnown RBP11.13□□□□□ -0.63
VPS25-202ENST00000589219 ANO3Q9BYT9 981 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 NT5C3AQ9H0P0 336 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 MAGEC2Q9UBF1 373 aaPredicted RBP11.13□□□□□ -0.63
VPS25-202ENST00000589219 DDX25Q9UHL0 483 aaKnown RBP11.13□□□□□ -0.63
VPS25-202ENST00000589219 STK24Q9Y6E0 443 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 OTOFQ9HC10 1997 aa11.13□□□□□ -0.63
VPS25-202ENST00000589219 A0A1W2PQC6 194 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 LGALS16A8MUM7 142 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 N4BP3O15049 544 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 NDUFB10O96000 172 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 FOSP01100 380 aaPredicted RBP11.12□□□□□ -0.63
VPS25-202ENST00000589219 BMP3P12645 472 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 SLC16A2P36021 539 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 USP11P51784 963 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 SOX10P56693 466 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 PDE4DQ08499 809 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 GRB10Q13322 594 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 HYIQ5T013 277 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 UNC13DQ70J99 1090 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 LARP4BQ92615 738 aaKnown RBP11.12□□□□□ -0.63
VPS25-202ENST00000589219 RAD54LQ92698 747 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 OPTNQ96CV9 577 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 TEPSINQ96N21 525 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 MBOAT7Q96N66 472 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 PNMA5Q96PV4 448 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 AMNQ9BXJ7 453 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 TMEM39BQ9GZU3 492 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 SH2D4AQ9H788 454 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 ARHGEF10LQ9HCE6 1279 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 PPP2R2CQ9Y2T4 447 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 CSADQ9Y600 493 aa11.12□□□□□ -0.63
VPS25-202ENST00000589219 TNRC18O15417 2968 aaPredicted RBP11.12□□□□□ -0.63
VPS25-202ENST00000589219 ABCB11O95342 1321 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 CYP3A7-CYP3A51PA0A087WV96 503 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 TESPA1A2RU30 521 aaPredicted RBP11.11□□□□□ -0.63
VPS25-202ENST00000589219 FAM196BA6NMK8 535 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 F5H6K3 240 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 IGF2BP3O00425 579 aaKnown RBP eCLIP11.11□□□□□ -0.63
VPS25-202ENST00000589219 PITPNM1O00562 1244 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 TBX3O15119 743 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 TEX33O43247 280 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 GDF11O95390 407 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 CYP3A7P24462 503 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 ETF1P62495 437 aaKnown RBP11.11□□□□□ -0.63
VPS25-202ENST00000589219 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 KLRC3Q07444 240 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 TTI2Q6NXR4 508 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 FAM83AQ86UY5 434 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 FBXO11Q86XK2 927 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 SLFN12Q8IYM2 578 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 LRRC15Q8TF66 581 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 FAM151AQ8WW52 585 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 ZNF592Q92610 1267 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 P2RX5Q93086 422 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 IQCDQ96DY2 449 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 ERO1AQ96HE7 468 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 R3HDMLQ9H3Y0 253 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 ELP3Q9H9T3 547 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 TAB2Q9NYJ8 693 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 PCDHA1Q9Y5I3 950 aa11.11□□□□□ -0.63
VPS25-202ENST00000589219 EDIL3O43854 480 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 MARCH6O60337 910 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 FGFR1OPO95684 399 aaKnown RBP11.1□□□□□ -0.63
VPS25-202ENST00000589219 GH2P01242 217 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 CCDC175P0C221 793 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 CCT6AP40227 531 aaKnown RBP11.1□□□□□ -0.63
VPS25-202ENST00000589219 GTF2A2P52657 109 aa11.1□□□□□ -0.63
VPS25-202ENST00000589219 PSMD2Q13200 908 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms