RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 KCNV1Q6PIU1 500 aa23.1■■□□□ 1.29
DDX39A-207ENST00000588542 PCSK9Q8NBP7 692 aaKnown RBP23.1■■□□□ 1.29
DDX39A-207ENST00000588542 DAGLBQ8NCG7 672 aa23.1■■□□□ 1.29
DDX39A-207ENST00000588542 WASF1Q92558 559 aa23.1■■□□□ 1.29
DDX39A-207ENST00000588542 LLPHQ9BRT6 129 aaKnown RBP23.1■■□□□ 1.29
DDX39A-207ENST00000588542 HTATIP2Q9BUP3 242 aa23.1■■□□□ 1.29
DDX39A-207ENST00000588542 GH1P01241 217 aa23.09■■□□□ 1.29
DDX39A-207ENST00000588542 LRRC26Q2I0M4 334 aa23.09■■□□□ 1.29
DDX39A-207ENST00000588542 BLIDQ8IZY5 108 aa23.09■■□□□ 1.29
DDX39A-207ENST00000588542 A6NJR5 290 aa23.08■■□□□ 1.29
DDX39A-207ENST00000588542 FIBPO43427 364 aa23.08■■□□□ 1.29
DDX39A-207ENST00000588542 UBA1P22314 1058 aaKnown RBP23.08■■□□□ 1.29
DDX39A-207ENST00000588542 ARHGAP4P98171 946 aa23.08■■□□□ 1.29
DDX39A-207ENST00000588542 GALNT17Q6IS24 598 aa23.08■■□□□ 1.29
DDX39A-207ENST00000588542 SLC39A5Q6ZMH5 540 aa23.08■■□□□ 1.29
DDX39A-207ENST00000588542 EMID1Q96A84 441 aaPredicted RBP23.08■■□□□ 1.29
DDX39A-207ENST00000588542 TMX3Q96JJ7 454 aa23.08■■□□□ 1.29
DDX39A-207ENST00000588542 BCAS3Q9H6U6 928 aa23.08■■□□□ 1.29
DDX39A-207ENST00000588542 SCN10AQ9Y5Y9 1956 aa23.07■■□□□ 1.28
DDX39A-207ENST00000588542 EDIL3O43854 480 aa23.07■■□□□ 1.28
DDX39A-207ENST00000588542 MCM2P49736 904 aa23.07■■□□□ 1.28
DDX39A-207ENST00000588542 CPT1AP50416 773 aa23.07■■□□□ 1.28
DDX39A-207ENST00000588542 ATN1P54259 1190 aaPredicted RBP23.07■■□□□ 1.28
DDX39A-207ENST00000588542 CELF3Q5SZQ8 465 aaKnown RBP23.07■■□□□ 1.28
DDX39A-207ENST00000588542 MYSM1Q5VVJ2 828 aa23.07■■□□□ 1.28
DDX39A-207ENST00000588542 NLRX1Q86UT6 975 aa23.07■■□□□ 1.28
DDX39A-207ENST00000588542 CYP2W1Q8TAV3 490 aa23.07■■□□□ 1.28
DDX39A-207ENST00000588542 GPRASP2Q96D09 838 aa23.07■■□□□ 1.28
DDX39A-207ENST00000588542 MXRA8Q9BRK3 442 aa23.07■■□□□ 1.28
DDX39A-207ENST00000588542 JADE2Q9NQC1 790 aa23.07■■□□□ 1.28
DDX39A-207ENST00000588542 GGPS1O95749 300 aa23.06■■□□□ 1.28
DDX39A-207ENST00000588542 CYP3A4P08684 503 aa23.06■■□□□ 1.28
DDX39A-207ENST00000588542 XBP1P17861 261 aa23.06■■□□□ 1.28
DDX39A-207ENST00000588542 SNX17Q15036 470 aa23.06■■□□□ 1.28
DDX39A-207ENST00000588542 CXCL17Q6UXB2 119 aa23.06■■□□□ 1.28
DDX39A-207ENST00000588542 DHX37Q8IY37 1157 aaKnown RBP23.06■■□□□ 1.28
DDX39A-207ENST00000588542 AFG1LQ8WV93 481 aa23.06■■□□□ 1.28
DDX39A-207ENST00000588542 ZEB2O60315 1214 aa23.05■■□□□ 1.28
DDX39A-207ENST00000588542 SORBS3O60504 671 aa23.05■■□□□ 1.28
DDX39A-207ENST00000588542 LAMC2Q13753 1193 aa23.05■■□□□ 1.28
DDX39A-207ENST00000588542 CEP55Q53EZ4 464 aa23.05■■□□□ 1.28
DDX39A-207ENST00000588542 DPF3Q92784 378 aa23.05■■□□□ 1.28
DDX39A-207ENST00000588542 MEIS1O00470 390 aa23.04■■□□□ 1.28
DDX39A-207ENST00000588542 ATP9AO75110 1047 aa23.04■■□□□ 1.28
DDX39A-207ENST00000588542 MMP3P08254 477 aa23.04■■□□□ 1.28
DDX39A-207ENST00000588542 KCNA2P16389 499 aa23.04■■□□□ 1.28
DDX39A-207ENST00000588542 PURAQ00577 322 aaKnown RBP23.04■■□□□ 1.28
DDX39A-207ENST00000588542 MTMR1Q13613 665 aa23.04■■□□□ 1.28
DDX39A-207ENST00000588542 C1orf53Q5VUE5 145 aa23.04■■□□□ 1.28
DDX39A-207ENST00000588542 OXER1Q8TDS5 423 aa23.04■■□□□ 1.28
DDX39A-207ENST00000588542 GLT1D1Q96MS3 346 aa23.04■■□□□ 1.28
DDX39A-207ENST00000588542 SENP7Q9BQF6 1050 aa23.04■■□□□ 1.28
DDX39A-207ENST00000588542 STARD7Q9NQZ5 370 aa23.04■■□□□ 1.28
DDX39A-207ENST00000588542 CEP290O15078 2479 aa23.04■■□□□ 1.28
DDX39A-207ENST00000588542 ELP1O95163 1332 aa23.04■■□□□ 1.28
DDX39A-207ENST00000588542 IGLV3-22A0A075B6J6 115 aa23.03■■□□□ 1.28
DDX39A-207ENST00000588542 FAM86B1E9PN63 330 aa23.03■■□□□ 1.28
DDX39A-207ENST00000588542 MAFGO15525 162 aa23.03■■□□□ 1.28
DDX39A-207ENST00000588542 FAM86B2P0C5J1 330 aa23.03■■□□□ 1.28
DDX39A-207ENST00000588542 ARP10275 920 aa23.03■■□□□ 1.28
DDX39A-207ENST00000588542 FOSBP53539 338 aa23.03■■□□□ 1.28
DDX39A-207ENST00000588542 HMGN5P82970 282 aaKnown RBP23.03■■□□□ 1.28
DDX39A-207ENST00000588542 NEDD9Q14511 834 aa23.03■■□□□ 1.28
DDX39A-207ENST00000588542 HSDL1Q3SXM5 330 aa23.03■■□□□ 1.28
DDX39A-207ENST00000588542 NIPA1Q7RTP0 329 aa23.03■■□□□ 1.28
DDX39A-207ENST00000588542 PPTC7Q8NI37 304 aa23.03■■□□□ 1.28
DDX39A-207ENST00000588542 CDHR1Q96JP9 859 aa23.03■■□□□ 1.28
DDX39A-207ENST00000588542 KCNH7Q9NS40 1196 aa23.03■■□□□ 1.28
DDX39A-207ENST00000588542 POLR3EQ9NVU0 708 aa23.03■■□□□ 1.28
DDX39A-207ENST00000588542 CABYRO75952 493 aa23.02■■□□□ 1.28
DDX39A-207ENST00000588542 MYL3P08590 195 aa23.02■■□□□ 1.28
DDX39A-207ENST00000588542 RTP1P59025 263 aa23.02■■□□□ 1.28
DDX39A-207ENST00000588542 BRDTQ58F21 947 aaPredicted RBP23.02■■□□□ 1.28
DDX39A-207ENST00000588542 KRT40Q6A162 431 aa23.02■■□□□ 1.28
DDX39A-207ENST00000588542 CYFIP1Q7L576 1253 aa23.02■■□□□ 1.28
DDX39A-207ENST00000588542 TBCKQ8TEA7 893 aa23.02■■□□□ 1.28
DDX39A-207ENST00000588542 SPATA33Q96N06 139 aa23.02■■□□□ 1.28
DDX39A-207ENST00000588542 MLXIPQ9HAP2 919 aa23.02■■□□□ 1.28
DDX39A-207ENST00000588542 TELO2Q9Y4R8 837 aa23.02■■□□□ 1.28
DDX39A-207ENST00000588542 GRIN2DO15399 1336 aa23.02■■□□□ 1.28
DDX39A-207ENST00000588542 EVI5O60447 810 aa23.01■■□□□ 1.27
DDX39A-207ENST00000588542 MMP1P03956 469 aa23.01■■□□□ 1.27
DDX39A-207ENST00000588542 HOXD8P13378 290 aaPredicted RBP23.01■■□□□ 1.27
DDX39A-207ENST00000588542 CIITAP33076 1130 aa23.01■■□□□ 1.27
DDX39A-207ENST00000588542 ZNF76P36508 570 aa23.01■■□□□ 1.27
DDX39A-207ENST00000588542 CDK7P50613 346 aa23.01■■□□□ 1.27
DDX39A-207ENST00000588542 TRIM60Q495X7 471 aa23.01■■□□□ 1.27
DDX39A-207ENST00000588542 METTL7BQ6UX53 244 aa23.01■■□□□ 1.27
DDX39A-207ENST00000588542 TNFRSF25Q93038 417 aa23.01■■□□□ 1.27
DDX39A-207ENST00000588542 KPNA6O60684 536 aa23■■□□□ 1.27
DDX39A-207ENST00000588542 USP11P51784 963 aa23■■□□□ 1.27
DDX39A-207ENST00000588542 PSMC6P62333 389 aa23■■□□□ 1.27
DDX39A-207ENST00000588542 NR5A1Q13285 461 aa23■■□□□ 1.27
DDX39A-207ENST00000588542 EARS2Q5JPH6 523 aaKnown RBP23■■□□□ 1.27
DDX39A-207ENST00000588542 KRT25Q7Z3Z0 450 aa23■■□□□ 1.27
DDX39A-207ENST00000588542 C7orf61Q8IZ16 206 aa23■■□□□ 1.27
DDX39A-207ENST00000588542 SLC43A3Q8NBI5 491 aa23■■□□□ 1.27
DDX39A-207ENST00000588542 GIMAP8Q8ND71 665 aaPredicted RBP23■■□□□ 1.27
DDX39A-207ENST00000588542 VTI1AQ96AJ9 217 aa23■■□□□ 1.27
DDX39A-207ENST00000588542 MTG1Q9BT17 334 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms