RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 ZFPM1Q8IX07 1006 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 CCDC144CPQ8IYA2 1237 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 AOPEPQ8N6M6 819 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 MLKLQ8NB16 471 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 CCDC150Q8NCX0 1101 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 CNNM3Q8NE01 707 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 MYRIPQ8NFW9 859 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 NEDD1Q8NHV4 660 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 C1orf216Q8TAB5 229 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 NUP133Q8WUM0 1156 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 FAM151AQ8WW52 585 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 HOOK2Q96ED9 719 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 HHIPL1Q96JK4 782 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 CLMNQ96JQ2 1002 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 LZTS2Q9BRK4 669 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 PHF20Q9BVI0 1012 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 OSBPL5Q9H0X9 879 aaPredicted RBP6.52□□□□□ -1.37
SDF2-206ENST00000587788 SENP2Q9HC62 589 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 INCENPQ9NQS7 918 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 SH3GLB2Q9NR46 395 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 SERPINB13Q9UIV8 391 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 PAXBP1Q9Y5B6 917 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 PPP2R3BQ9Y5P8 575 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 TACC3Q9Y6A5 838 aa6.52□□□□□ -1.37
SDF2-206ENST00000587788 TMEM229AB2RXF0 380 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 BTBD18B2RXH4 712 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 PPFIA3O75145 1194 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 USP2O75604 605 aaPredicted RBP6.51□□□□□ -1.37
SDF2-206ENST00000587788 TSPY3P0CV98 308 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 TSPY8P0CW00 308 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 SMARCA1P28370 1054 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 MARCKSP29966 332 aaPredicted RBP6.51□□□□□ -1.37
SDF2-206ENST00000587788 ZNF157P51786 506 aaPredicted RBP6.51□□□□□ -1.37
SDF2-206ENST00000587788 FKBP1BP68106 108 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 MYL5Q02045 173 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 TCP10Q12799 353 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 TROAPQ12815 778 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 TNFAIP1Q13829 316 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 NT5DC1Q5TFE4 455 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 TMTC3Q6ZXV5 915 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 LRRC8AQ8IWT6 810 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 ZSCAN29Q8IWY8 852 aaPredicted RBP6.51□□□□□ -1.37
SDF2-206ENST00000587788 ZNF830Q96NB3 372 aaPredicted RBP6.51□□□□□ -1.37
SDF2-206ENST00000587788 AIFM3Q96NN9 605 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 ZKSCAN3Q9BRR0 538 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 MYL10Q9BUA6 226 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 KCNF1Q9H3M0 494 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 CYLDQ9NQC7 956 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 DDX4Q9NQI0 724 aaKnown RBP6.51□□□□□ -1.37
SDF2-206ENST00000587788 GJB4Q9NTQ9 266 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 HERC5Q9UII4 1024 aaKnown RBP6.51□□□□□ -1.37
SDF2-206ENST00000587788 FBXO2Q9UK22 296 aaPredicted RBP6.51□□□□□ -1.37
SDF2-206ENST00000587788 IVNS1ABPQ9Y6Y0 642 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 ATRNL1Q5VV63 1379 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 LOC285556D6RIA3 1793 aa6.51□□□□□ -1.37
SDF2-206ENST00000587788 FLT1P17948 1338 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 ROBO3Q96MS0 1386 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 UQCRHLA0A096LP55 91 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 FOXN1O15353 648 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 GDF9O60383 454 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 UQCRHP07919 91 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 SLFN14P0C7P3 912 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 ERCC5P28715 1186 aaPredicted RBP6.5□□□□□ -1.37
SDF2-206ENST00000587788 GUCY1A2P33402 732 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 NF2P35240 595 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 ECE1P42892 770 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 NOVP48745 357 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 TOB1P50616 345 aaPredicted RBP6.5□□□□□ -1.37
SDF2-206ENST00000587788 MAP3K10Q02779 954 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 GABPAQ06546 454 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 PICALMQ13492 652 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 POSTNQ15063 836 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 PKN1Q16512 942 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 DPCR1Q3MIW9 517 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 LONRF3Q496Y0 759 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 LDLRAD1Q5T700 205 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 ARL6IP4Q66PJ3 421 aaKnown RBP6.5□□□□□ -1.37
SDF2-206ENST00000587788 TATDN1Q6P1N9 297 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 STK11IPQ8N1F8 1099 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 CCDC112Q8NEF3 446 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 CCDC148Q8NFR7 591 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 MKL1Q969V6 931 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 KLF16Q9BXK1 252 aaPredicted RBP6.5□□□□□ -1.37
SDF2-206ENST00000587788 GTPBP4Q9BZE4 634 aaKnown RBP6.5□□□□□ -1.37
SDF2-206ENST00000587788 KAT14Q9H8E8 782 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 KANSL2Q9H9L4 492 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 CABP5Q9NP86 173 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 GINM1Q9NU53 330 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 ZNF358Q9NW07 568 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 SAP30BPQ9UHR5 308 aaKnown RBP6.5□□□□□ -1.37
SDF2-206ENST00000587788 PYCARDQ9ULZ3 195 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 SYNPO2Q9UMS6 1093 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 KCNJ14Q9UNX9 436 aa6.5□□□□□ -1.37
SDF2-206ENST00000587788 MGAMO43451 1857 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 COL2A1P02458 1487 aaPredicted RBP6.49□□□□□ -1.37
SDF2-206ENST00000587788 CYP2D7A0A087X1C5 515 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 DDTLA6NHG4 134 aaPredicted RBP6.49□□□□□ -1.37
SDF2-206ENST00000587788 LAD1O00515 517 aa6.49□□□□□ -1.37
SDF2-206ENST00000587788 TOP1P11387 765 aaKnown RBP6.49□□□□□ -1.37
SDF2-206ENST00000587788 SKILP12757 684 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms