RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 ZC3H12DA2A288 527 aaKnown RBP3.62□□□□□ -1.83
RPRD1A-204ENST00000585953 LRRC10BA6NIK2 292 aa3.62□□□□□ -1.83
RPRD1A-204ENST00000585953 DNAJC8O75937 253 aaPredicted RBP3.62□□□□□ -1.83
RPRD1A-204ENST00000585953 SLC6A11P48066 632 aa3.62□□□□□ -1.83
RPRD1A-204ENST00000585953 PAK1Q13153 545 aa3.62□□□□□ -1.83
RPRD1A-204ENST00000585953 MLANAQ16655 118 aa3.62□□□□□ -1.83
RPRD1A-204ENST00000585953 C21orf62-AS1Q17RA5 79 aa3.62□□□□□ -1.83
RPRD1A-204ENST00000585953 ZNF605Q86T29 641 aa3.62□□□□□ -1.83
RPRD1A-204ENST00000585953 DCP2Q8IU60 420 aaKnown RBP3.62□□□□□ -1.83
RPRD1A-204ENST00000585953 PCDH19Q8TAB3 1148 aa3.62□□□□□ -1.83
RPRD1A-204ENST00000585953 MAGEB10Q96LZ2 347 aaPredicted RBP3.62□□□□□ -1.83
RPRD1A-204ENST00000585953 JAM3Q9BX67 310 aa3.62□□□□□ -1.83
RPRD1A-204ENST00000585953 EPB41L4BQ9H329 900 aa3.62□□□□□ -1.83
RPRD1A-204ENST00000585953 ZNF552Q9H707 407 aaPredicted RBP3.62□□□□□ -1.83
RPRD1A-204ENST00000585953 SIT1Q9Y3P8 196 aa3.62□□□□□ -1.83
RPRD1A-204ENST00000585953 HCFC2Q9Y5Z7 792 aa3.62□□□□□ -1.83
RPRD1A-204ENST00000585953 TCRBV16S1A1N1A0A5B0 115 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 FAM47E-STBD1D6RA91 191 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 F8W031 263 aaPredicted RBP3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 HRKO00198 91 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 WNT9AO14904 365 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 ZSCAN22P10073 491 aaPredicted RBP3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 MAPKAPK2P49137 400 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 TMEM62Q0P6H9 643 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 PEX11GQ96HA9 241 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 KCNK12Q9HB15 430 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 DCP1AQ9NPI6 582 aaPredicted RBP3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 NUDT5Q9UKK9 219 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 PLAAQ9Y263 795 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 ABLIM1O14639 778 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 DGKIO75912 1065 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 SDSP20132 328 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 VIPR1P32241 457 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 DALRD3Q5D0E6 543 aaKnown RBP3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 TMC6Q7Z403 805 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 ANKLE2Q86XL3 938 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 ZC3H7AQ8IWR0 971 aaKnown RBP3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 SEC14L1Q92503 715 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 NINJ1Q92982 152 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 KCNJ15Q99712 375 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 AP5M1Q9H0R1 490 aa3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 DBR1Q9UK59 544 aaKnown RBP3.61□□□□□ -1.83
RPRD1A-204ENST00000585953 CADPSQ9ULU8 1353 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 NACADO15069 1562 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 MYOCOSA0A1B0GUC4 107 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 SGSM2O43147 1006 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 SRGAP2CP0DJJ0 459 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 PRR5P85299 388 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 EMC4Q5J8M3 183 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 HABP4Q5JVS0 413 aaKnown RBP3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 EGFLAMQ63HQ2 1017 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 OLFML2BQ68BL8 750 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 ZC3H14Q6PJT7 736 aaKnown RBP3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 AMIGO3Q86WK7 504 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 NIM1KQ8IY84 436 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 PIP4K2CQ8TBX8 421 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 TSPAN17Q96FV3 270 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 IRS4O14654 1257 aaPredicted RBP3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 PEX10O60683 326 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 CKMP06732 381 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 GNAT1P11488 350 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 KCNA6P17658 529 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 IGFALSP35858 605 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 ZNF460Q14592 562 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 CHRNA2Q15822 529 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 STEAP3Q658P3 488 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 ABHD17CQ6PCB6 329 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 OTOP3Q7RTS5 596 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 FBXW5Q969U6 566 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 MCOLN1Q9GZU1 580 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 INTS7Q9NVH2 962 aaKnown RBP3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 MAGEC2Q9UBF1 373 aaPredicted RBP3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 PALD1Q9ULE6 856 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 PLA2G2DQ9UNK4 145 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 ZNF652Q9Y2D9 606 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 COQ6Q9Y2Z9 468 aa3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 TNPO3Q9Y5L0 923 aaKnown RBP3.6□□□□□ -1.83
RPRD1A-204ENST00000585953 UNC13AQ9UPW8 1703 aa3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 CCDC66A2RUB6 948 aa3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 HGSO14964 777 aaPredicted RBP3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 NKRFO15226 690 aaKnown RBP eCLIP3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 ASLP04424 464 aa3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 APPP05067 770 aa3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 PYGMP11217 842 aa3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 COL6A2P12110 1019 aa3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 GYS2P54840 703 aa3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 SRSF3P84103 164 aaKnown RBP3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 ZNF200P98182 395 aaPredicted RBP3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 SPIRE1Q08AE8 756 aa3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 SLC9A5Q14940 896 aa3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 FAM47CQ5HY64 1035 aa3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 DHX37Q8IY37 1157 aaKnown RBP3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 FBXO15Q8NCQ5 510 aaPredicted RBP3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 MFSD3Q96ES6 412 aa3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 CELF4Q9BZC1 486 aaKnown RBP3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 SLC6A20Q9NP91 592 aa3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 CBLCQ9ULV8 474 aa3.59□□□□□ -1.83
RPRD1A-204ENST00000585953 LOC105371045A0A1W2PR82 267 aa3.59□□□□□ -1.84
RPRD1A-204ENST00000585953 KRIT1O00522 736 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms