RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 CYP2C9P11712 490 aa14.22□□□□□ -0.13
SS18-225ENST00000585121 UBA1P22314 1058 aaKnown RBP14.22□□□□□ -0.13
SS18-225ENST00000585121 METAP2P50579 478 aaKnown RBP eCLIP14.22□□□□□ -0.13
SS18-225ENST00000585121 BFSP2Q13515 415 aa14.22□□□□□ -0.13
SS18-225ENST00000585121 TMEM240Q5SV17 173 aa14.22□□□□□ -0.13
SS18-225ENST00000585121 ZNF697Q5TEC3 545 aa14.22□□□□□ -0.13
SS18-225ENST00000585121 PCNX4Q63HM2 1172 aa14.22□□□□□ -0.13
SS18-225ENST00000585121 Q6ZUG5 572 aa14.22□□□□□ -0.13
SS18-225ENST00000585121 Q7L0L9 218 aa14.22□□□□□ -0.13
SS18-225ENST00000585121 CCDC155Q8N6L0 562 aa14.22□□□□□ -0.13
SS18-225ENST00000585121 ZNF713Q8N859 430 aaPredicted RBP14.22□□□□□ -0.13
SS18-225ENST00000585121 C7orf31Q8N865 590 aa14.22□□□□□ -0.13
SS18-225ENST00000585121 ZFP91Q96JP5 570 aaPredicted RBP14.22□□□□□ -0.13
SS18-225ENST00000585121 INPP4AQ96PE3 977 aaPredicted RBP14.22□□□□□ -0.13
SS18-225ENST00000585121 V9GY48 417 aaPredicted RBP14.22□□□□□ -0.13
SS18-225ENST00000585121 NOP56O00567 594 aaKnown RBP14.21□□□□□ -0.13
SS18-225ENST00000585121 SORBS3O60504 671 aa14.21□□□□□ -0.13
SS18-225ENST00000585121 ACRP10323 421 aa14.21□□□□□ -0.13
SS18-225ENST00000585121 RPS6KB1P23443 525 aa14.21□□□□□ -0.13
SS18-225ENST00000585121 ICAM3P32942 547 aa14.21□□□□□ -0.13
SS18-225ENST00000585121 PSEN2P49810 448 aa14.21□□□□□ -0.13
SS18-225ENST00000585121 NAPAP54920 295 aa14.21□□□□□ -0.13
SS18-225ENST00000585121 MRPS9P82933 396 aaKnown RBP14.21□□□□□ -0.13
SS18-225ENST00000585121 PTGISQ16647 500 aa14.21□□□□□ -0.13
SS18-225ENST00000585121 PPP1R18Q6NYC8 613 aa14.21□□□□□ -0.13
SS18-225ENST00000585121 ZNF365Q70YC5 407 aa14.21□□□□□ -0.13
SS18-225ENST00000585121 TEX2Q8IWB9 1127 aa14.21□□□□□ -0.13
SS18-225ENST00000585121 GPKOWQ92917 476 aaPredicted RBP eCLIP14.21□□□□□ -0.13
SS18-225ENST00000585121 BRF1Q92994 677 aa14.21□□□□□ -0.13
SS18-225ENST00000585121 CDHR1Q96JP9 859 aa14.21□□□□□ -0.13
SS18-225ENST00000585121 ALG1Q9BT22 464 aa14.21□□□□□ -0.13
SS18-225ENST00000585121 GLT8D2Q9H1C3 349 aa14.21□□□□□ -0.13
SS18-225ENST00000585121 CNTNAP5Q8WYK1 1306 aa14.21□□□□□ -0.14
SS18-225ENST00000585121 SPATA31C2B4DYI2 1134 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 CPA1P15085 419 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 SP2Q02086 613 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 APOBRQ0VD83 1088 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 MFSD10Q14728 455 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 SESTD1Q86VW0 696 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 GIMAP8Q8ND71 665 aaPredicted RBP14.2□□□□□ -0.14
SS18-225ENST00000585121 KAT2BQ92831 832 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 MTMR10Q9NXD2 777 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 UMODL1Q5DID0 1318 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 PITPNM1O00562 1244 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 PFKMP08237 780 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 ZNF286BP0CG31 522 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 RFC2P35250 354 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 AKAP17AQ02040 695 aaKnown RBP14.2□□□□□ -0.14
SS18-225ENST00000585121 UBE2SQ16763 222 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 KIAA0753Q2KHM9 967 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 HSDL1Q3SXM5 330 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 WWC2Q6AWC2 1192 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 METTL7BQ6UX53 244 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 C16orf59Q7L2K0 433 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 CYFIP1Q7L576 1253 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 CAGE1Q8TC20 777 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 PPP1R13LQ8WUF5 828 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 SENP7Q9BQF6 1050 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 WNT8AQ9H1J5 351 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 RIC8AQ9NPQ8 531 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 PCDHA6Q9UN73 950 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 PCDHA8Q9Y5H6 950 aa14.2□□□□□ -0.14
SS18-225ENST00000585121 F2P00734 622 aa14.19□□□□□ -0.14
SS18-225ENST00000585121 FOSP01100 380 aaPredicted RBP14.19□□□□□ -0.14
SS18-225ENST00000585121 HOXD8P13378 290 aaPredicted RBP14.19□□□□□ -0.14
SS18-225ENST00000585121 CDC27P30260 824 aa14.19□□□□□ -0.14
SS18-225ENST00000585121 ADD1P35611 737 aaKnown RBP14.19□□□□□ -0.14
SS18-225ENST00000585121 ADCY7P51828 1080 aa14.19□□□□□ -0.14
SS18-225ENST00000585121 FUT2Q10981 343 aa14.19□□□□□ -0.14
SS18-225ENST00000585121 GDF6Q6KF10 455 aaPredicted RBP14.19□□□□□ -0.14
SS18-225ENST00000585121 FBXL16Q8N461 479 aa14.19□□□□□ -0.14
SS18-225ENST00000585121 HERVK_113Q902F9 699 aa14.19□□□□□ -0.14
SS18-225ENST00000585121 GPRASP2Q96D09 838 aa14.19□□□□□ -0.14
SS18-225ENST00000585121 SCLYQ96I15 445 aa14.19□□□□□ -0.14
SS18-225ENST00000585121 USP26Q9BXU7 913 aa14.19□□□□□ -0.14
SS18-225ENST00000585121 BARHL2Q9NY43 387 aa14.19□□□□□ -0.14
SS18-225ENST00000585121 GTF2IRD1Q9UHL9 959 aa14.19□□□□□ -0.14
SS18-225ENST00000585121 CYP46A1Q9Y6A2 500 aa14.19□□□□□ -0.14
SS18-225ENST00000585121 LAMA2P24043 3122 aaKnown RBP14.19□□□□□ -0.14
SS18-225ENST00000585121 SCN10AQ9Y5Y9 1956 aa14.18□□□□□ -0.14
SS18-225ENST00000585121 KIAA1217Q5T5P2 1943 aa14.18□□□□□ -0.14
SS18-225ENST00000585121 TMEM265A0A087WTH1 108 aa14.18□□□□□ -0.14
SS18-225ENST00000585121 SMCO2A6NFE2 343 aa14.18□□□□□ -0.14
SS18-225ENST00000585121 ACTN1P12814 892 aa14.18□□□□□ -0.14
SS18-225ENST00000585121 CCDC12Q8WUD4 166 aaPredicted RBP14.18□□□□□ -0.14
SS18-225ENST00000585121 FAM161BQ96MY7 647 aa14.18□□□□□ -0.14
SS18-225ENST00000585121 FAM217BQ9NTX9 383 aaPredicted RBP14.18□□□□□ -0.14
SS18-225ENST00000585121 HDAC6Q9UBN7 1215 aa14.18□□□□□ -0.14
SS18-225ENST00000585121 ZBBXA8MT70 800 aa14.17□□□□□ -0.14
SS18-225ENST00000585121 HAS3O00219 553 aa14.17□□□□□ -0.14
SS18-225ENST00000585121 MAFGO15525 162 aa14.17□□□□□ -0.14
SS18-225ENST00000585121 EIF5BO60841 1220 aaKnown RBP14.17□□□□□ -0.14
SS18-225ENST00000585121 RUFY3Q7L099 469 aa14.17□□□□□ -0.14
SS18-225ENST00000585121 OTOP2Q7RTS6 562 aa14.17□□□□□ -0.14
SS18-225ENST00000585121 DEFB128Q7Z7B8 93 aa14.17□□□□□ -0.14
SS18-225ENST00000585121 AFAP1L1Q8TED9 768 aa14.17□□□□□ -0.14
SS18-225ENST00000585121 FTOQ9C0B1 505 aaKnown RBP eCLIP14.17□□□□□ -0.14
SS18-225ENST00000585121 SEMA6BQ9H3T3 888 aa14.17□□□□□ -0.14
SS18-225ENST00000585121 ZNF215Q9UL58 517 aaPredicted RBP14.17□□□□□ -0.14
SS18-225ENST00000585121 STXBP5LQ9Y2K9 1186 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms