RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 STK32BQ9NY57 414 aa15.19■□□□□ 0.02
SRSF1-205ENST00000582730 TFR2Q9UP52 801 aa15.19■□□□□ 0.02
SRSF1-205ENST00000582730 ZYXQ15942 572 aaKnown RBP15.19■□□□□ 0.02
SRSF1-205ENST00000582730 NCAPH2Q6IBW4 605 aa15.19■□□□□ 0.02
SRSF1-205ENST00000582730 PLCD3Q8N3E9 789 aa15.19■□□□□ 0.02
SRSF1-205ENST00000582730 TRIM10Q9UDY6 481 aa15.19■□□□□ 0.02
SRSF1-205ENST00000582730 CAPN11Q9UMQ6 739 aa15.19■□□□□ 0.02
SRSF1-205ENST00000582730 MYH7BA7E2Y1 1941 aa15.19■□□□□ 0.02
SRSF1-205ENST00000582730 NPHP3-ACAD11A0A0J9YXS1 232 aa15.19■□□□□ 0.02
SRSF1-205ENST00000582730 COASYQ13057 564 aa15.19■□□□□ 0.02
SRSF1-205ENST00000582730 RRP1BQ14684 758 aaKnown RBP15.19■□□□□ 0.02
SRSF1-205ENST00000582730 NELFCDQ8IXH7 590 aa15.19■□□□□ 0.02
SRSF1-205ENST00000582730 TSG101Q99816 390 aa15.19■□□□□ 0.02
SRSF1-205ENST00000582730 FAM207AQ9NSI2 230 aaPredicted RBP15.19■□□□□ 0.02
SRSF1-205ENST00000582730 PANK4Q9NVE7 773 aa15.19■□□□□ 0.02
SRSF1-205ENST00000582730 KDM3AQ9Y4C1 1321 aa15.18■□□□□ 0.02
SRSF1-205ENST00000582730 CTAGE9A4FU28 777 aa15.18■□□□□ 0.02
SRSF1-205ENST00000582730 MEIS2O14770 477 aa15.18■□□□□ 0.02
SRSF1-205ENST00000582730 ATP8B1O43520 1251 aa15.18■□□□□ 0.02
SRSF1-205ENST00000582730 ECE1P42892 770 aa15.18■□□□□ 0.02
SRSF1-205ENST00000582730 CENPPQ6IPU0 288 aa15.18■□□□□ 0.02
SRSF1-205ENST00000582730 CC2D1AQ6P1N0 951 aaPredicted RBP15.18■□□□□ 0.02
SRSF1-205ENST00000582730 GPBP1Q86WP2 473 aa15.18■□□□□ 0.02
SRSF1-205ENST00000582730 SUPT20HQ8NEM7 779 aa15.18■□□□□ 0.02
SRSF1-205ENST00000582730 NAP1L4Q99733 375 aaKnown RBP15.18■□□□□ 0.02
SRSF1-205ENST00000582730 NT5C3AQ9H0P0 336 aa15.18■□□□□ 0.02
SRSF1-205ENST00000582730 MMRN2Q9H8L6 949 aa15.18■□□□□ 0.02
SRSF1-205ENST00000582730 ZBTB12Q9Y330 459 aaPredicted RBP15.18■□□□□ 0.02
SRSF1-205ENST00000582730 A0A1W2PRG0 241 aa15.18■□□□□ 0.02
SRSF1-205ENST00000582730 FECHP22830 423 aa15.18■□□□□ 0.02
SRSF1-205ENST00000582730 ZNF76P36508 570 aa15.18■□□□□ 0.02
SRSF1-205ENST00000582730 SMC1AQ14683 1233 aaKnown RBP15.18■□□□□ 0.02
SRSF1-205ENST00000582730 KIAA1328Q86T90 577 aa15.18■□□□□ 0.02
SRSF1-205ENST00000582730 LARGE2Q8N3Y3 721 aa15.18■□□□□ 0.02
SRSF1-205ENST00000582730 GUF1Q8N442 669 aaKnown RBP15.18■□□□□ 0.02
SRSF1-205ENST00000582730 PDGFDQ9GZP0 370 aaPredicted RBP15.18■□□□□ 0.02
SRSF1-205ENST00000582730 C10orf71Q711Q0 1435 aa15.18■□□□□ 0.02
SRSF1-205ENST00000582730 POTEFA5A3E0 1075 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 MEIS1O00470 390 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 ENTPD3O75355 529 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 IPO7O95373 1038 aaKnown RBP15.17■□□□□ 0.02
SRSF1-205ENST00000582730 PLA2G4BP0C869 781 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 POTEIP0CG38 1075 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 MUM1L1Q5H9M0 696 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 MIIPQ5JXC2 388 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 FAM26FQ5R3K3 315 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 POTEGQ6S5H5 508 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 POTEEQ6S8J3 1075 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 MYOCDQ8IZQ8 938 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 USP11P51784 963 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 HERC4Q5GLZ8 1057 aaPredicted RBP15.17■□□□□ 0.02
SRSF1-205ENST00000582730 P2RX7Q99572 595 aaKnown RBP15.17■□□□□ 0.02
SRSF1-205ENST00000582730 NUP58Q9BVL2 599 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 ZNF277Q9NRM2 450 aaPredicted RBP15.17■□□□□ 0.02
SRSF1-205ENST00000582730 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.17■□□□□ 0.02
SRSF1-205ENST00000582730 TRAF5O00463 557 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 FGFR1OPO95684 399 aaKnown RBP15.17■□□□□ 0.02
SRSF1-205ENST00000582730 TFRCP02786 760 aaKnown RBP15.17■□□□□ 0.02
SRSF1-205ENST00000582730 DLGAP5Q15398 846 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 CCDC40Q4G0X9 1142 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 VWA3BQ502W6 1294 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 OGFOD1Q8N543 542 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 GMCL1P1Q8NEA9 526 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 C7orf43Q8WVR3 580 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 DNAJC7Q99615 494 aa15.17■□□□□ 0.02
SRSF1-205ENST00000582730 SIPA1L1O43166 1804 aa15.16■□□□□ 0.02
SRSF1-205ENST00000582730 MED24O75448 989 aa15.16■□□□□ 0.02
SRSF1-205ENST00000582730 AP3B2Q13367 1082 aa15.16■□□□□ 0.02
SRSF1-205ENST00000582730 CCDC174Q6PII3 467 aa15.16■□□□□ 0.02
SRSF1-205ENST00000582730 WDR59Q6PJI9 974 aa15.16■□□□□ 0.02
SRSF1-205ENST00000582730 ACER1Q8TDN7 264 aa15.16■□□□□ 0.02
SRSF1-205ENST00000582730 NDST4Q9H3R1 872 aa15.16■□□□□ 0.02
SRSF1-205ENST00000582730 ARHGAP25P42331 645 aa15.16■□□□□ 0.02
SRSF1-205ENST00000582730 CYP4A11Q02928 519 aa15.16■□□□□ 0.02
SRSF1-205ENST00000582730 GPS2Q13227 327 aa15.16■□□□□ 0.02
SRSF1-205ENST00000582730 CCDC122Q5T0U0 273 aa15.16■□□□□ 0.02
SRSF1-205ENST00000582730 CCDC65Q8IXS2 484 aa15.16■□□□□ 0.02
SRSF1-205ENST00000582730 GOLGA1Q92805 767 aa15.16■□□□□ 0.02
SRSF1-205ENST00000582730 GMCL1Q96IK5 515 aa15.16■□□□□ 0.02
SRSF1-205ENST00000582730 NAPGQ99747 312 aaPredicted RBP15.16■□□□□ 0.02
SRSF1-205ENST00000582730 FGFBP2Q9BYJ0 223 aa15.16■□□□□ 0.02
SRSF1-205ENST00000582730 PRR12Q9ULL5 1215 aa15.16■□□□□ 0.02
SRSF1-205ENST00000582730 REXO2Q9Y3B8 237 aaKnown RBP15.16■□□□□ 0.02
SRSF1-205ENST00000582730 GREB1LQ9C091 1923 aaPredicted RBP15.15■□□□□ 0.02
SRSF1-205ENST00000582730 CFBP00751 764 aa15.15■□□□□ 0.02
SRSF1-205ENST00000582730 ZBED6P86452 979 aa15.15■□□□□ 0.02
SRSF1-205ENST00000582730 LRRC63Q05C16 580 aa15.15■□□□□ 0.02
SRSF1-205ENST00000582730 PABPC4Q13310 644 aaKnown RBP eCLIP15.15■□□□□ 0.02
SRSF1-205ENST00000582730 ZSCAN26Q16670 478 aa15.15■□□□□ 0.02
SRSF1-205ENST00000582730 HAUS3Q68CZ6 603 aa15.15■□□□□ 0.02
SRSF1-205ENST00000582730 MIGA2Q7L4E1 593 aa15.15■□□□□ 0.02
SRSF1-205ENST00000582730 SLFN12Q8IYM2 578 aa15.15■□□□□ 0.02
SRSF1-205ENST00000582730 DNAJC19Q96DA6 116 aa15.15■□□□□ 0.02
SRSF1-205ENST00000582730 ARHGEF10LQ9HCE6 1279 aa15.15■□□□□ 0.02
SRSF1-205ENST00000582730 KCNMB3Q9NPA1 279 aa15.15■□□□□ 0.02
SRSF1-205ENST00000582730 PSMD14O00487 310 aa15.15■□□□□ 0.02
SRSF1-205ENST00000582730 CYLC1P35663 651 aaPredicted RBP15.15■□□□□ 0.02
SRSF1-205ENST00000582730 GYS2P54840 703 aa15.15■□□□□ 0.02
SRSF1-205ENST00000582730 CHMP4BP1P59074 171 aa15.15■□□□□ 0.02
SRSF1-205ENST00000582730 MAN2A1Q16706 1144 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms