RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 CCDC96Q2M329 555 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 EPC2Q52LR7 807 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 TCEAL5Q5H9L2 206 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 SLC30A10Q6XR72 485 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.99□□□□□ -0.972e-10■■■■□ 20.1
CCDC47-205ENST00000582331 SIRT2Q8IXJ6 389 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 KBTBD3Q8NAB2 608 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 SPRYD3Q8NCJ5 442 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 DNERQ8NFT8 737 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 PANK1Q8TE04 598 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 AFG1LQ8WV93 481 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 DHX38Q92620 1227 aaKnown RBP8.99□□□□□ -0.97
CCDC47-205ENST00000582331 ANKS1AQ92625 1134 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 PHOX2BQ99453 314 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 NACAP1Q9BZK3 213 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 LCTP09848 1927 aa8.99□□□□□ -0.97
CCDC47-205ENST00000582331 TSPY2A6NKD2 308 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 H3BNC9 293 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 LGR5O75473 907 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 ARIH2O95376 493 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 ZFYP08048 801 aaPredicted RBP8.98□□□□□ -0.97
CCDC47-205ENST00000582331 MMP3P08254 477 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 CASTP20810 708 aaKnown RBP8.98□□□□□ -0.97
CCDC47-205ENST00000582331 EDNRBP24530 442 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 SLC16A2P36021 539 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 PTPN5P54829 565 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 RPS6P62753 249 aaKnown RBP8.98□□□□□ -0.97
CCDC47-205ENST00000582331 HTRA4P83105 476 aaPredicted RBP8.98□□□□□ -0.97
CCDC47-205ENST00000582331 PPARAQ07869 468 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 PTK7Q13308 1070 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 SYDE2Q5VT97 1194 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 TTBK2Q6IQ55 1244 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 CCDC62Q6P9F0 684 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 BTNL9Q6UXG8 535 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 RASGRP2Q7LDG7 609 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 C7orf31Q8N865 590 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 DCAF4Q8WV16 495 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 CLEC4DQ8WXI8 215 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 KAT2BQ92831 832 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 POP1Q99575 1024 aaKnown RBP8.98□□□□□ -0.97
CCDC47-205ENST00000582331 NSUN3Q9H649 340 aaKnown RBP8.98□□□□□ -0.97
CCDC47-205ENST00000582331 CLDND1Q9NY35 253 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 HDAC6Q9UBN7 1215 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 GTF2IRD1Q9UHL9 959 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 PNMA2Q9UL42 364 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 BRWD1Q9NSI6 2320 aa8.98□□□□□ -0.97
CCDC47-205ENST00000582331 TRIOO75962 3097 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 M0R2C6 588 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 NCK2O43639 380 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 GH1P01241 217 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 ARHGAP1Q07960 439 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 COL19A1Q14993 1142 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 HERC4Q5GLZ8 1057 aaPredicted RBP8.97□□□□□ -0.97
CCDC47-205ENST00000582331 ZNF618Q5T7W0 954 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 CHST3Q7LGC8 479 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 BMP8AQ7Z5Y6 402 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 RNF135Q8IUD6 432 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 TMEM192Q8IY95 271 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 MYOCDQ8IZQ8 938 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 PRSS33Q8NF86 280 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 DBF4BQ8NFT6 615 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 EDAQ92838 391 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 PRRX2Q99811 253 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 ALG1Q9BT22 464 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 LRRCC1Q9C099 1032 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 NAPBQ9H115 298 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 IL17RBQ9NRM6 502 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 ECHDC1Q9NTX5 307 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 MUTYHQ9UIF7 546 aa8.97□□□□□ -0.97
CCDC47-205ENST00000582331 NMT2O60551 498 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 MS4A1P11836 297 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 LTBRP36941 435 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 PSEN2P49810 448 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 MBTPS1Q14703 1052 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 SMAD2Q15796 467 aaKnown RBP8.96□□□□□ -0.98
CCDC47-205ENST00000582331 PKN1Q16512 942 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 DGKDQ16760 1214 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 LY6KQ17RY6 165 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 TRIM71Q2Q1W2 868 aaKnown RBP8.96□□□□□ -0.98
CCDC47-205ENST00000582331 TRAF7Q6Q0C0 670 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 ADGRD1Q6QNK2 874 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 SEPT14Q6ZU15 432 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 RPAINQ86UA6 219 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 ZNF454Q8N9F8 522 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 PBXIP1Q96AQ6 731 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 YME1L1Q96TA2 773 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 KATNAL1Q9BW62 490 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 GPCPD1Q9NPB8 672 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 SUPT16HQ9Y5B9 1047 aaKnown RBP8.96□□□□□ -0.98
CCDC47-205ENST00000582331 EMSYQ7Z589 1322 aa8.96□□□□□ -0.98
CCDC47-205ENST00000582331 C5orf42Q9H799 3197 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 TMEM221A6NGB7 291 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 RSPH10B2B2RC85 870 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 M0R296 226 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 MBTPS2O43462 519 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 SMARCA5O60264 1052 aaPredicted RBP8.95□□□□□ -0.98
CCDC47-205ENST00000582331 RANBP6O60518 1105 aaKnown RBP8.95□□□□□ -0.98
CCDC47-205ENST00000582331 UPP2O95045 317 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 RSPH10BP0C881 870 aa8.95□□□□□ -0.98
CCDC47-205ENST00000582331 NOVP48745 357 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms