RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 IGFBP6P24592 240 aaPredicted RBP6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 GFRA1P56159 465 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 SCRN1Q12765 414 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 SLC9A5Q14940 896 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 TCEA2Q15560 299 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 C21orf62-AS1Q17RA5 79 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 PRSS53Q2L4Q9 553 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 TTLL7Q6ZT98 887 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 FRMD5Q7Z6J6 570 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 KIAA0907Q7Z7F0 614 aaPredicted RBP6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 TMEM145Q8NBT3 493 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 FNIP1Q8TF40 1166 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 KCTD13Q8WZ19 329 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 SPATA25Q9BR10 227 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 CLEC1BQ9P126 229 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 CD2APQ9Y5K6 639 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 CCDC163A0A0D9SF12 145 aa6.78□□□□□ -1.32
SMCHD1-205ENST00000581383 A0A1B0GTL3 188 aa6.78□□□□□ -1.32
SMCHD1-205ENST00000581383 BLACEA4D250 179 aa6.78□□□□□ -1.32
SMCHD1-205ENST00000581383 RAPGEF3O95398 923 aa6.78□□□□□ -1.32
SMCHD1-205ENST00000581383 GLI4P10075 376 aa6.78□□□□□ -1.32
SMCHD1-205ENST00000581383 PMLP29590 882 aa6.78□□□□□ -1.32
SMCHD1-205ENST00000581383 DBX2Q6ZNG2 339 aa6.78□□□□□ -1.32
SMCHD1-205ENST00000581383 NETO2Q8NC67 525 aa6.78□□□□□ -1.32
SMCHD1-205ENST00000581383 BORCS6Q96GS4 357 aa6.78□□□□□ -1.32
SMCHD1-205ENST00000581383 FEZ1Q99689 392 aa6.78□□□□□ -1.32
SMCHD1-205ENST00000581383 AP5M1Q9H0R1 490 aa6.78□□□□□ -1.32
SMCHD1-205ENST00000581383 SLKQ9H2G2 1235 aaPredicted RBP6.78□□□□□ -1.32
SMCHD1-205ENST00000581383 GPRC5CQ9NQ84 441 aa6.78□□□□□ -1.32
SMCHD1-205ENST00000581383 ANKRD62A6NC57 917 aa6.77□□□□□ -1.33
SMCHD1-205ENST00000581383 GYS2P54840 703 aa6.77□□□□□ -1.33
SMCHD1-205ENST00000581383 GJA9P57773 515 aa6.77□□□□□ -1.33
SMCHD1-205ENST00000581383 SUMO1P63165 101 aaKnown RBP6.77□□□□□ -1.33
SMCHD1-205ENST00000581383 CYP4F3Q08477 520 aa6.77□□□□□ -1.33
SMCHD1-205ENST00000581383 WWC2Q6AWC2 1192 aa6.77□□□□□ -1.33
SMCHD1-205ENST00000581383 SYNPOQ8N3V7 929 aa6.77□□□□□ -1.33
SMCHD1-205ENST00000581383 SMARCC2Q8TAQ2 1214 aa6.77□□□□□ -1.33
SMCHD1-205ENST00000581383 ZNF526Q8TF50 670 aaPredicted RBP6.77□□□□□ -1.33
SMCHD1-205ENST00000581383 ZBTB8AQ96BR9 441 aa6.77□□□□□ -1.33
SMCHD1-205ENST00000581383 YIPF4Q9BSR8 244 aa6.77□□□□□ -1.33
SMCHD1-205ENST00000581383 NCOA5Q9HCD5 579 aaKnown RBP6.77□□□□□ -1.33
SMCHD1-205ENST00000581383 MARCH2Q9P0N8 246 aa6.77□□□□□ -1.33
SMCHD1-205ENST00000581383 PLA2G2DQ9UNK4 145 aa6.77□□□□□ -1.33
SMCHD1-205ENST00000581383 CPP00450 1065 aa6.76□□□□□ -1.33
SMCHD1-205ENST00000581383 NTRK1P04629 796 aa6.76□□□□□ -1.33
SMCHD1-205ENST00000581383 SCG5P05408 212 aa6.76□□□□□ -1.33
SMCHD1-205ENST00000581383 THBDP07204 575 aa6.76□□□□□ -1.33
SMCHD1-205ENST00000581383 MAP4K2Q12851 820 aa6.76□□□□□ -1.33
SMCHD1-205ENST00000581383 DENND5AQ6IQ26 1287 aa6.76□□□□□ -1.33
SMCHD1-205ENST00000581383 LIPIQ6XZB0 460 aa6.76□□□□□ -1.33
SMCHD1-205ENST00000581383 USP53Q70EK8 1073 aa6.76□□□□□ -1.33
SMCHD1-205ENST00000581383 B3GNT8Q7Z7M8 397 aa6.76□□□□□ -1.33
SMCHD1-205ENST00000581383 TP53I13Q8NBR0 393 aaPredicted RBP6.76□□□□□ -1.33
SMCHD1-205ENST00000581383 DDX1Q92499 740 aaKnown RBP6.76□□□□□ -1.33
SMCHD1-205ENST00000581383 COPS5Q92905 334 aa6.76□□□□□ -1.33
SMCHD1-205ENST00000581383 TSPAN17Q96FV3 270 aa6.76□□□□□ -1.33
SMCHD1-205ENST00000581383 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMCHD1-205ENST00000581383 NTMQ9P121 344 aa6.76□□□□□ -1.33
SMCHD1-205ENST00000581383 PALD1Q9ULE6 856 aa6.76□□□□□ -1.33
SMCHD1-205ENST00000581383 C7orf72A4D263 438 aa6.75□□□□□ -1.33
SMCHD1-205ENST00000581383 PLA2G1BP04054 148 aaKnown RBP6.75□□□□□ -1.33
SMCHD1-205ENST00000581383 PLS3P13797 630 aa6.75□□□□□ -1.33
SMCHD1-205ENST00000581383 CAP1Q01518 475 aa6.75□□□□□ -1.33
SMCHD1-205ENST00000581383 RTP5Q14D33 572 aa6.75□□□□□ -1.33
SMCHD1-205ENST00000581383 SKOR2Q2VWA4 1001 aaPredicted RBP6.75□□□□□ -1.33
SMCHD1-205ENST00000581383 DALRD3Q5D0E6 543 aaKnown RBP6.75□□□□□ -1.33
SMCHD1-205ENST00000581383 SLC35F1Q5T1Q4 408 aa6.75□□□□□ -1.33
SMCHD1-205ENST00000581383 FERMT3Q86UX7 667 aa6.75□□□□□ -1.33
SMCHD1-205ENST00000581383 DCP2Q8IU60 420 aaKnown RBP6.75□□□□□ -1.33
SMCHD1-205ENST00000581383 KREMEN2Q8NCW0 462 aa6.75□□□□□ -1.33
SMCHD1-205ENST00000581383 FRS2Q8WU20 508 aa6.75□□□□□ -1.33
SMCHD1-205ENST00000581383 C1orf159Q96HA4 380 aa6.75□□□□□ -1.33
SMCHD1-205ENST00000581383 PLD2O14939 933 aa6.74□□□□□ -1.33
SMCHD1-205ENST00000581383 CYP2C8P10632 490 aa6.74□□□□□ -1.33
SMCHD1-205ENST00000581383 SARSP49591 514 aaKnown RBP6.74□□□□□ -1.33
SMCHD1-205ENST00000581383 CACNB2Q08289 660 aaPredicted RBP6.74□□□□□ -1.33
SMCHD1-205ENST00000581383 SMAD4Q13485 552 aaKnown RBP6.74□□□□□ -1.33
SMCHD1-205ENST00000581383 NTRK3Q16288 839 aa6.74□□□□□ -1.33
SMCHD1-205ENST00000581383 CD300LDQ6UXZ3 194 aa6.74□□□□□ -1.33
SMCHD1-205ENST00000581383 SAPCD2Q86UD0 394 aa6.74□□□□□ -1.33
SMCHD1-205ENST00000581383 CARFQ8N187 725 aa6.74□□□□□ -1.33
SMCHD1-205ENST00000581383 CHAMP1Q96JM3 812 aa6.74□□□□□ -1.33
SMCHD1-205ENST00000581383 CLUHP3Q96NS8 147 aa6.74□□□□□ -1.33
SMCHD1-205ENST00000581383 SIT1Q9Y3P8 196 aa6.74□□□□□ -1.33
SMCHD1-205ENST00000581383 K7ESM1 405 aa6.73□□□□□ -1.33
SMCHD1-205ENST00000581383 MYO1BO43795 1136 aa6.73□□□□□ -1.33
SMCHD1-205ENST00000581383 C6orf222P0C671 652 aaPredicted RBP6.73□□□□□ -1.33
SMCHD1-205ENST00000581383 PABPC4Q13310 644 aaKnown RBP eCLIP6.73□□□□□ -1.33
SMCHD1-205ENST00000581383 TAF7LQ5H9L4 462 aa6.73□□□□□ -1.33
SMCHD1-205ENST00000581383 ZC3H18Q86VM9 953 aaKnown RBP6.73□□□□□ -1.33
SMCHD1-205ENST00000581383 PPIL6Q8IXY8 311 aa6.73□□□□□ -1.33
SMCHD1-205ENST00000581383 DHX37Q8IY37 1157 aaKnown RBP6.73□□□□□ -1.33
SMCHD1-205ENST00000581383 NPLOC4Q8TAT6 608 aa6.73□□□□□ -1.33
SMCHD1-205ENST00000581383 NDOR1Q9UHB4 597 aa6.73□□□□□ -1.33
SMCHD1-205ENST00000581383 TMEFF2Q9UIK5 374 aaPredicted RBP6.73□□□□□ -1.33
SMCHD1-205ENST00000581383 C22orf46C9J442 243 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 ARNTLO00327 626 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 MEFVO15553 781 aaPredicted RBP6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 ADRB1P08588 477 aa6.72□□□□□ -1.33
SMCHD1-205ENST00000581383 FBLN1P23142 703 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms