RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 TANC1Q9C0D5 1861 aa18.54■□□□□ 0.56
VAPA-204ENST00000577901 EPOPA6NHQ4 379 aa18.53■□□□□ 0.56
VAPA-204ENST00000577901 SH2B2O14492 632 aaPredicted RBP18.53■□□□□ 0.56
VAPA-204ENST00000577901 ARHGEF15O94989 841 aa18.53■□□□□ 0.56
VAPA-204ENST00000577901 BMP1P13497 986 aa18.53■□□□□ 0.56
VAPA-204ENST00000577901 CASTP20810 708 aaKnown RBP18.53■□□□□ 0.56
VAPA-204ENST00000577901 AAK1Q2M2I8 961 aa18.53■□□□□ 0.56
VAPA-204ENST00000577901 SESTD1Q86VW0 696 aa18.53■□□□□ 0.56
VAPA-204ENST00000577901 ZNF654Q8IZM8 581 aa18.53■□□□□ 0.56
VAPA-204ENST00000577901 CTCFLQ8NI51 663 aaPredicted RBP18.53■□□□□ 0.56
VAPA-204ENST00000577901 CAGE1Q8TC20 777 aa18.53■□□□□ 0.56
VAPA-204ENST00000577901 KAT2BQ92831 832 aa18.53■□□□□ 0.56
VAPA-204ENST00000577901 KCNB2Q92953 911 aa18.53■□□□□ 0.56
VAPA-204ENST00000577901 CTAGE1Q96RT6 745 aa18.53■□□□□ 0.56
VAPA-204ENST00000577901 JMJD4Q9H9V9 463 aa18.53■□□□□ 0.56
VAPA-204ENST00000577901 DDAH1O94760 285 aa18.52■□□□□ 0.56
VAPA-204ENST00000577901 CALM1P0DP23 149 aa18.52■□□□□ 0.56
VAPA-204ENST00000577901 CALM2P0DP24 149 aa18.52■□□□□ 0.56
VAPA-204ENST00000577901 CALM3P0DP25 149 aa18.52■□□□□ 0.56
VAPA-204ENST00000577901 KIF5BP33176 963 aa18.52■□□□□ 0.56
VAPA-204ENST00000577901 QRICH1Q2TAL8 776 aa18.52■□□□□ 0.56
VAPA-204ENST00000577901 SYNE3Q6ZMZ3 975 aa18.52■□□□□ 0.56
VAPA-204ENST00000577901 FBXO11Q86XK2 927 aa18.52■□□□□ 0.56
VAPA-204ENST00000577901 NECAB3Q96P71 396 aaPredicted RBP18.52■□□□□ 0.56
VAPA-204ENST00000577901 MRPL11Q9Y3B7 192 aaKnown RBP18.52■□□□□ 0.56
VAPA-204ENST00000577901 MYO9BQ13459 2157 aa18.52■□□□□ 0.56
VAPA-204ENST00000577901 TLL1O43897 1013 aa18.51■□□□□ 0.55
VAPA-204ENST00000577901 EIF5BO60841 1220 aaKnown RBP18.51■□□□□ 0.55
VAPA-204ENST00000577901 EIF3JO75822 258 aaKnown RBP18.51■□□□□ 0.55
VAPA-204ENST00000577901 SELPP16109 830 aa18.51■□□□□ 0.55
VAPA-204ENST00000577901 KCNJ6P48051 423 aa18.51■□□□□ 0.55
VAPA-204ENST00000577901 EXOSC10Q01780 885 aaKnown RBP18.51■□□□□ 0.55
VAPA-204ENST00000577901 DGKDQ16760 1214 aa18.51■□□□□ 0.55
VAPA-204ENST00000577901 ADCK5Q3MIX3 580 aa18.51■□□□□ 0.55
VAPA-204ENST00000577901 ARHGEF16Q5VV41 709 aa18.51■□□□□ 0.55
VAPA-204ENST00000577901 KRT40Q6A162 431 aa18.51■□□□□ 0.55
VAPA-204ENST00000577901 LRRC8DQ7L1W4 858 aa18.51■□□□□ 0.55
VAPA-204ENST00000577901 DHX38Q92620 1227 aaKnown RBP18.51■□□□□ 0.55
VAPA-204ENST00000577901 LRRC2Q9BYS8 371 aa18.51■□□□□ 0.55
VAPA-204ENST00000577901 DDX41Q9UJV9 622 aaKnown RBP18.51■□□□□ 0.55
VAPA-204ENST00000577901 SLC12A7Q9Y666 1083 aa18.51■□□□□ 0.55
VAPA-204ENST00000577901 EIF2AK2P19525 551 aaKnown RBP18.5■□□□□ 0.55
VAPA-204ENST00000577901 GNAQP50148 359 aa18.5■□□□□ 0.55
VAPA-204ENST00000577901 KCNQ1P51787 676 aa18.5■□□□□ 0.55
VAPA-204ENST00000577901 WDR5P61964 334 aaKnown RBP18.5■□□□□ 0.55
VAPA-204ENST00000577901 TRAF1Q13077 416 aa18.5■□□□□ 0.55
VAPA-204ENST00000577901 GPNMBQ14956 572 aa18.5■□□□□ 0.55
VAPA-204ENST00000577901 C7orf31Q8N865 590 aa18.5■□□□□ 0.55
VAPA-204ENST00000577901 EMID1Q96A84 441 aaPredicted RBP18.5■□□□□ 0.55
VAPA-204ENST00000577901 LZTS2Q9BRK4 669 aa18.5■□□□□ 0.55
VAPA-204ENST00000577901 AMNQ9BXJ7 453 aa18.5■□□□□ 0.55
VAPA-204ENST00000577901 PXMP2Q9NR77 195 aa18.5■□□□□ 0.55
VAPA-204ENST00000577901 GTF2IRD1Q9UHL9 959 aa18.5■□□□□ 0.55
VAPA-204ENST00000577901 SNX14Q9Y5W7 946 aa18.5■□□□□ 0.55
VAPA-204ENST00000577901 BDP1A6H8Y1 2624 aa18.49■□□□□ 0.55
VAPA-204ENST00000577901 ZBTB5O15062 677 aa18.49■□□□□ 0.55
VAPA-204ENST00000577901 PARNO95453 639 aaKnown RBP18.49■□□□□ 0.55
VAPA-204ENST00000577901 CFBP00751 764 aa18.49■□□□□ 0.55
VAPA-204ENST00000577901 PSMA5P28066 241 aa18.49■□□□□ 0.55
VAPA-204ENST00000577901 FGD1P98174 961 aa18.49■□□□□ 0.55
VAPA-204ENST00000577901 COL9A3Q14050 684 aaPredicted RBP18.49■□□□□ 0.55
VAPA-204ENST00000577901 BLOC1S2Q6QNY1 142 aa18.49■□□□□ 0.55
VAPA-204ENST00000577901 SGMS1Q86VZ5 419 aa18.49■□□□□ 0.55
VAPA-204ENST00000577901 JAKMIP1Q96N16 626 aaKnown RBP18.49■□□□□ 0.55
VAPA-204ENST00000577901 KATNAL1Q9BW62 490 aa18.49■□□□□ 0.55
VAPA-204ENST00000577901 USP26Q9BXU7 913 aa18.49■□□□□ 0.55
VAPA-204ENST00000577901 RIOX1Q9H6W3 641 aa18.49■□□□□ 0.55
VAPA-204ENST00000577901 HDAC6Q9UBN7 1215 aa18.49■□□□□ 0.55
VAPA-204ENST00000577901 MRVI1Q9Y6F6 885 aa18.49■□□□□ 0.55
VAPA-204ENST00000577901 LCHNA4D1U4 455 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 NR3C2P08235 984 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 CKBP12277 381 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 SMARCA1P28370 1054 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 PSEN2P49810 448 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 RBL2Q08999 1139 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 GRB10Q13322 594 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 LAMC2Q13753 1193 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 CNKSR3Q6P9H4 555 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 SPRED2Q7Z698 418 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 TMCO2Q7Z6W1 182 aaPredicted RBP18.48■□□□□ 0.55
VAPA-204ENST00000577901 HOMER1Q86YM7 354 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 PPTC7Q8NI37 304 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 MTMR8Q96EF0 704 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 ALG1Q9BT22 464 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 ZBED2Q9BTP6 218 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 MYL10Q9BUA6 226 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 RAPGEFL1Q9UHV5 662 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 COG5Q9UP83 839 aa18.48■□□□□ 0.55
VAPA-204ENST00000577901 OPLAHO14841 1288 aa18.47■□□□□ 0.55
VAPA-204ENST00000577901 NBNO60934 754 aa18.47■□□□□ 0.55
VAPA-204ENST00000577901 F2P00734 622 aa18.47■□□□□ 0.55
VAPA-204ENST00000577901 CXCL10P02778 98 aa18.47■□□□□ 0.55
VAPA-204ENST00000577901 ZNF286BP0CG31 522 aa18.47■□□□□ 0.55
VAPA-204ENST00000577901 HSD17B4P51659 736 aa18.47■□□□□ 0.55
VAPA-204ENST00000577901 DEFB103AP81534 67 aa18.47■□□□□ 0.55
VAPA-204ENST00000577901 MFSD10Q14728 455 aa18.47■□□□□ 0.55
VAPA-204ENST00000577901 KIAA0753Q2KHM9 967 aa18.47■□□□□ 0.55
VAPA-204ENST00000577901 DHX37Q8IY37 1157 aaKnown RBP18.47■□□□□ 0.55
VAPA-204ENST00000577901 FANCBQ8NB91 859 aa18.47■□□□□ 0.55
VAPA-204ENST00000577901 TCEANC2Q96MN5 208 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms