RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 FUT2Q10981 343 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 ZNF658Q5TYW1 1059 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-215ENST00000575112 POTEBQ6S5H4 581 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 SYCP3Q8IZU3 236 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 MB21D1Q8N884 522 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 KRT86O43790 486 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 SLC37A4O43826 429 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 USO1O60763 962 aaKnown RBP9.41□□□□□ -0.9
RPAIN-215ENST00000575112 ABCB4P21439 1286 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 SSR1P43307 286 aaKnown RBP9.41□□□□□ -0.9
RPAIN-215ENST00000575112 ARHGAP44Q17R89 818 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 NAALADL2Q58DX5 795 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 CT47A1Q5JQC4 288 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-215ENST00000575112 KRT25Q7Z3Z0 450 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 ZNF579Q8NAF0 562 aaKnown RBP9.41□□□□□ -0.9
RPAIN-215ENST00000575112 CAPS2Q9BXY5 557 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 IFIH1Q9BYX4 1025 aaKnown RBP9.41□□□□□ -0.9
RPAIN-215ENST00000575112 MAD2L2Q9UI95 211 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 ZBTB12Q9Y330 459 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-215ENST00000575112 CAPN7Q9Y6W3 813 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 SPATA31A5Q5VU36 1347 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 SPATA31A7Q8IWB4 1347 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 POTEFA5A3E0 1075 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 LRRC10BA6NIK2 292 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 POTEB2H3BUK9 544 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 POTEIP0CG38 1075 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 CERKLQ49MI3 558 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-215ENST00000575112 SLFN13Q68D06 897 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 POTEGQ6S5H5 508 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 POTEEQ6S8J3 1075 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 SLF2Q8IX21 1173 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 DDX12PQ92771 950 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 JPH2Q9BR39 696 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-215ENST00000575112 CHORDC1Q9UHD1 332 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-215ENST00000575112 NUP188Q5SRE5 1749 aa9.4□□□□□ -0.9
RPAIN-215ENST00000575112 PPEF1O14829 653 aaPredicted RBP9.4□□□□□ -0.9
RPAIN-215ENST00000575112 CYP2J2P51589 502 aa9.4□□□□□ -0.9
RPAIN-215ENST00000575112 MRPL12P52815 198 aaKnown RBP9.4□□□□□ -0.9
RPAIN-215ENST00000575112 UHMK1Q8TAS1 419 aaKnown RBP9.4□□□□□ -0.9
RPAIN-215ENST00000575112 TBC1D16Q8TBP0 767 aa9.4□□□□□ -0.9
RPAIN-215ENST00000575112 ZNF512BQ96KM6 892 aaPredicted RBP9.4□□□□□ -0.9
RPAIN-215ENST00000575112 LSM14BQ9BX40 385 aaKnown RBP9.4□□□□□ -0.9
RPAIN-215ENST00000575112 WDR19Q8NEZ3 1342 aa9.4□□□□□ -0.9
RPAIN-215ENST00000575112 ADAMTSL3P82987 1691 aa9.4□□□□□ -0.9
RPAIN-215ENST00000575112 GCNT3O95395 438 aa9.4□□□□□ -0.9
RPAIN-215ENST00000575112 LONP1P36776 959 aaKnown RBP9.4□□□□□ -0.9
RPAIN-215ENST00000575112 EIF4A3P38919 411 aaKnown RBP9.4□□□□□ -0.9
RPAIN-215ENST00000575112 CARSP49589 748 aaKnown RBP9.4□□□□□ -0.9
RPAIN-215ENST00000575112 PAPD7Q5XG87 772 aaKnown RBP9.4□□□□□ -0.9
RPAIN-215ENST00000575112 ZNF507Q8TCN5 953 aa9.4□□□□□ -0.9
RPAIN-215ENST00000575112 AENQ8WTP8 325 aaKnown RBP9.4□□□□□ -0.9
RPAIN-215ENST00000575112 LARP4BQ92615 738 aaKnown RBP9.4□□□□□ -0.9
RPAIN-215ENST00000575112 P2RX5Q93086 422 aa9.4□□□□□ -0.9
RPAIN-215ENST00000575112 IKZF4Q9H2S9 585 aa9.4□□□□□ -0.9
RPAIN-215ENST00000575112 GOPCQ9HD26 462 aa9.4□□□□□ -0.9
RPAIN-215ENST00000575112 DAGLAQ9Y4D2 1042 aa9.4□□□□□ -0.9
RPAIN-215ENST00000575112 FLT1P17948 1338 aa9.4□□□□□ -0.9
RPAIN-215ENST00000575112 C21orf2O43822 256 aa9.4□□□□□ -0.91
RPAIN-215ENST00000575112 GLI1P08151 1106 aa9.4□□□□□ -0.91
RPAIN-215ENST00000575112 CTTNQ14247 550 aaKnown RBP9.4□□□□□ -0.91
RPAIN-215ENST00000575112 WDR78Q5VTH9 848 aa9.4□□□□□ -0.91
RPAIN-215ENST00000575112 MMS22LQ6ZRQ5 1243 aa9.4□□□□□ -0.91
RPAIN-215ENST00000575112 DGKHQ86XP1 1220 aa9.4□□□□□ -0.91
RPAIN-215ENST00000575112 EFCAB13Q8IY85 973 aa9.4□□□□□ -0.91
RPAIN-215ENST00000575112 ADGRF4Q8IZF3 695 aa9.4□□□□□ -0.91
RPAIN-215ENST00000575112 OR2W6PQ8NHA6 318 aa9.4□□□□□ -0.91
RPAIN-215ENST00000575112 TEKT1Q969V4 418 aa9.4□□□□□ -0.91
RPAIN-215ENST00000575112 ZIM3Q96PE6 472 aa9.4□□□□□ -0.91
RPAIN-215ENST00000575112 RBM12Q9NTZ6 932 aaKnown RBP9.4□□□□□ -0.91
RPAIN-215ENST00000575112 PANK4Q9NVE7 773 aa9.4□□□□□ -0.91
RPAIN-215ENST00000575112 ADAMTS1Q9UHI8 967 aa9.4□□□□□ -0.91
RPAIN-215ENST00000575112 H7C1D1 291 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 SHOX2O60902 331 aaPredicted RBP9.39□□□□□ -0.91
RPAIN-215ENST00000575112 TBCAO75347 108 aaKnown RBP9.39□□□□□ -0.91
RPAIN-215ENST00000575112 GH2P01242 217 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 PDE6BP35913 854 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 GJC1P36383 396 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 PAFAH1B1P43034 410 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 GFPT1Q06210 699 aaPredicted RBP9.39□□□□□ -0.91
RPAIN-215ENST00000575112 EHHADHQ08426 723 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 ODF2Q5BJF6 829 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 TNFRSF25Q93038 417 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 RNPC3Q96LT9 517 aaKnown RBP9.39□□□□□ -0.91
RPAIN-215ENST00000575112 CCDC113Q9H0I3 377 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 DDX4Q9NQI0 724 aaKnown RBP9.39□□□□□ -0.91
RPAIN-215ENST00000575112 BARHL2Q9NY43 387 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 RGL1Q9NZL6 768 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 TMOD2Q9NZR1 351 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 AFF2P51816 1311 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 A0A087WUV0 522 aaPredicted RBP9.39□□□□□ -0.91
RPAIN-215ENST00000575112 MYMKA6NI61 221 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 STXBP3O00186 592 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 HGSO14964 777 aaPredicted RBP9.39□□□□□ -0.91
RPAIN-215ENST00000575112 MYCLP12524 364 aaPredicted RBP9.39□□□□□ -0.91
RPAIN-215ENST00000575112 ICA1Q05084 483 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 ACTN3Q08043 901 aaPredicted RBP9.39□□□□□ -0.91
RPAIN-215ENST00000575112 AOC3Q16853 763 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 PRAMEF18Q5VWM3 479 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 DNAJC7Q99615 494 aa9.39□□□□□ -0.91
RPAIN-215ENST00000575112 RWDD2AQ9UIY3 292 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms