RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 KCTD3Q9Y597 815 aa7.01□□□□□ -1.29
CDC27-215ENST00000573550 PRDM2Q13029 1718 aa7.01□□□□□ -1.29
CDC27-215ENST00000573550 NCAM1P13591 858 aa7□□□□□ -1.29
CDC27-215ENST00000573550 PFKLP17858 780 aa7□□□□□ -1.29
CDC27-215ENST00000573550 GRK2P25098 689 aa7□□□□□ -1.29
CDC27-215ENST00000573550 GRK3P35626 688 aa7□□□□□ -1.29
CDC27-215ENST00000573550 TARBP2Q15633 366 aaKnown RBP7□□□□□ -1.29
CDC27-215ENST00000573550 KIZQ2M2Z5 673 aa7□□□□□ -1.29
CDC27-215ENST00000573550 EMC4Q5J8M3 183 aa7□□□□□ -1.29
CDC27-215ENST00000573550 DPH6Q7L8W6 267 aa7□□□□□ -1.29
CDC27-215ENST00000573550 MAMDC2Q7Z304 686 aaPredicted RBP7□□□□□ -1.29
CDC27-215ENST00000573550 FAM129CQ86XR2 697 aa7□□□□□ -1.29
CDC27-215ENST00000573550 LRRC56Q8IYG6 542 aaPredicted RBP7□□□□□ -1.29
CDC27-215ENST00000573550 IFNL3Q8IZI9 196 aa7□□□□□ -1.29
CDC27-215ENST00000573550 PANK1Q8TE04 598 aa7□□□□□ -1.29
CDC27-215ENST00000573550 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7□□□□□ -1.29
CDC27-215ENST00000573550 CPA5Q8WXQ8 436 aa7□□□□□ -1.29
CDC27-215ENST00000573550 PTPRN2Q92932 1015 aa7□□□□□ -1.29
CDC27-215ENST00000573550 IPO9Q96P70 1041 aaKnown RBP7□□□□□ -1.29
CDC27-215ENST00000573550 PIF1Q9H611 641 aa7□□□□□ -1.29
CDC27-215ENST00000573550 PALD1Q9ULE6 856 aa7□□□□□ -1.29
CDC27-215ENST00000573550 ZNF652Q9Y2D9 606 aa7□□□□□ -1.29
CDC27-215ENST00000573550 PTCH2Q9Y6C5 1203 aa7□□□□□ -1.29
CDC27-215ENST00000573550 SOGA1O94964 1423 aa7□□□□□ -1.29
CDC27-215ENST00000573550 AMIGO3Q86WK7 504 aa6.99□□□□□ -1.29
CDC27-215ENST00000573550 MIB1Q86YT6 1006 aa6.99□□□□□ -1.29
CDC27-215ENST00000573550 FAM9AQ8IZU1 332 aaPredicted RBP6.99□□□□□ -1.29
CDC27-215ENST00000573550 ZSWIM2Q8NEG5 633 aa6.99□□□□□ -1.29
CDC27-215ENST00000573550 JAM3Q9BX67 310 aa6.99□□□□□ -1.29
CDC27-215ENST00000573550 NUAK1O60285 661 aa6.98□□□□□ -1.29
CDC27-215ENST00000573550 TADA3O75528 432 aa6.98□□□□□ -1.29
CDC27-215ENST00000573550 DGKIO75912 1065 aa6.98□□□□□ -1.29
CDC27-215ENST00000573550 LIMS1P48059 325 aa6.98□□□□□ -1.29
CDC27-215ENST00000573550 GABREP78334 506 aa6.98□□□□□ -1.29
CDC27-215ENST00000573550 CHRNA2Q15822 529 aa6.98□□□□□ -1.29
CDC27-215ENST00000573550 ZNF385BQ569K4 471 aa6.98□□□□□ -1.29
CDC27-215ENST00000573550 STEAP3Q658P3 488 aa6.98□□□□□ -1.29
CDC27-215ENST00000573550 CIAPIN1Q6FI81 312 aa6.98□□□□□ -1.29
CDC27-215ENST00000573550 MILR1Q7Z6M3 343 aa6.98□□□□□ -1.29
CDC27-215ENST00000573550 MRFAP1L1Q96HT8 127 aa6.98□□□□□ -1.29
CDC27-215ENST00000573550 RFXAPO00287 272 aa6.97□□□□□ -1.29
CDC27-215ENST00000573550 AQP7O14520 342 aa6.97□□□□□ -1.29
CDC27-215ENST00000573550 HGSO14964 777 aaPredicted RBP6.97□□□□□ -1.29
CDC27-215ENST00000573550 SOD2P04179 222 aa6.97□□□□□ -1.29
CDC27-215ENST00000573550 CACNB2Q08289 660 aaPredicted RBP6.97□□□□□ -1.29
CDC27-215ENST00000573550 CNKSR3Q6P9H4 555 aa6.97□□□□□ -1.29
CDC27-215ENST00000573550 ETV3LQ6ZN32 361 aa6.97□□□□□ -1.29
CDC27-215ENST00000573550 B3GNT8Q7Z7M8 397 aa6.97□□□□□ -1.29
CDC27-215ENST00000573550 KRTAP1-3Q8IUG1 177 aa6.97□□□□□ -1.29
CDC27-215ENST00000573550 DACT3Q96B18 629 aaPredicted RBP6.97□□□□□ -1.29
CDC27-215ENST00000573550 IRF2BPLQ9H1B7 796 aa6.97□□□□□ -1.29
CDC27-215ENST00000573550 KANSL2Q9H9L4 492 aa6.97□□□□□ -1.29
CDC27-215ENST00000573550 FOXO4P98177 505 aa6.96□□□□□ -1.3
CDC27-215ENST00000573550 SQSTM1Q13501 440 aa6.96□□□□□ -1.3
CDC27-215ENST00000573550 TRIM61Q5EBN2 209 aa6.96□□□□□ -1.3
CDC27-215ENST00000573550 HABP4Q5JVS0 413 aaKnown RBP6.96□□□□□ -1.3
CDC27-215ENST00000573550 LCNL1Q6ZST4 164 aa6.96□□□□□ -1.3
CDC27-215ENST00000573550 GSTCDQ8NEC7 633 aa6.96□□□□□ -1.3
CDC27-215ENST00000573550 ZSCAN18Q8TBC5 510 aaPredicted RBP6.96□□□□□ -1.3
CDC27-215ENST00000573550 PIP4K2CQ8TBX8 421 aa6.96□□□□□ -1.3
CDC27-215ENST00000573550 IPPKQ9H8X2 491 aa6.96□□□□□ -1.3
CDC27-215ENST00000573550 SLC52A2Q9HAB3 445 aa6.96□□□□□ -1.3
CDC27-215ENST00000573550 SLC6A20Q9NP91 592 aa6.96□□□□□ -1.3
CDC27-215ENST00000573550 NCAPD3P42695 1498 aa6.96□□□□□ -1.3
CDC27-215ENST00000573550 VPS8Q8N3P4 1428 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 CCDC163A0A0D9SF12 145 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 TCRBV5S2A0A599 114 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 ARVCFO00192 962 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 WNT9AO14904 365 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 PLA2G1BP04054 148 aaKnown RBP6.95□□□□□ -1.3
CDC27-215ENST00000573550 C8BP07358 591 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 HTRA3P83110 453 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 CYP4F22Q6NT55 531 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 OTOP3Q7RTS5 596 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 MTDHQ86UE4 582 aaKnown RBP6.95□□□□□ -1.3
CDC27-215ENST00000573550 FAM126BQ8IXS8 530 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 ARRDC4Q8NCT1 418 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 SMARCC2Q8TAQ2 1214 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 SH3TC2Q8TF17 1288 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 KCNJ15Q99712 375 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 ALG1Q9BT22 464 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 MYOTQ9UBF9 498 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 FAN1Q9Y2M0 1017 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 PCDHB4Q9Y5E5 795 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 PCDHA8Q9Y5H6 950 aa6.95□□□□□ -1.3
CDC27-215ENST00000573550 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.94□□□□□ -1.3
CDC27-215ENST00000573550 FAM47E-STBD1D6RA91 191 aa6.94□□□□□ -1.3
CDC27-215ENST00000573550 KRIT1O00522 736 aa6.94□□□□□ -1.3
CDC27-215ENST00000573550 FZD5Q13467 585 aa6.94□□□□□ -1.3
CDC27-215ENST00000573550 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
CDC27-215ENST00000573550 FAM26EQ8N5C1 309 aa6.94□□□□□ -1.3
CDC27-215ENST00000573550 SLC7A14Q8TBB6 771 aa6.94□□□□□ -1.3
CDC27-215ENST00000573550 PHOSPHO1Q8TCT1 267 aa6.94□□□□□ -1.3
CDC27-215ENST00000573550 PWWP2AQ96N64 755 aa6.94□□□□□ -1.3
CDC27-215ENST00000573550 SMOC1Q9H4F8 434 aa6.94□□□□□ -1.3
CDC27-215ENST00000573550 NCOA5Q9HCD5 579 aaKnown RBP6.94□□□□□ -1.3
CDC27-215ENST00000573550 ASH2LQ9UBL3 628 aa6.94□□□□□ -1.3
CDC27-215ENST00000573550 RUSC2Q8N2Y8 1516 aa6.93□□□□□ -1.3
CDC27-215ENST00000573550 NKRFO15226 690 aaKnown RBP eCLIP6.93□□□□□ -1.3
CDC27-215ENST00000573550 KCNQ2O43526 872 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms