RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 WNT8BQ93098 351 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 IL17RAQ96F46 866 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 RPGRIP1Q96KN7 1286 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 PHF7Q9BWX1 381 aaPredicted RBP15.45■□□□□ 0.06
CCDC40-208ENST00000572270 BCL11AQ9H165 835 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 BOLA2Q9H3K6 86 aa15.45■□□□□ 0.06
CCDC40-208ENST00000572270 RIF1Q5UIP0 2472 aaKnown RBP15.44■□□□□ 0.06
CCDC40-208ENST00000572270 CACNA1BQ00975 2339 aa15.44■□□□□ 0.06
CCDC40-208ENST00000572270 KRT37O76014 449 aa15.44■□□□□ 0.06
CCDC40-208ENST00000572270 MMP1P03956 469 aa15.44■□□□□ 0.06
CCDC40-208ENST00000572270 ICAM3P32942 547 aa15.44■□□□□ 0.06
CCDC40-208ENST00000572270 BMPR1AP36894 532 aa15.44■□□□□ 0.06
CCDC40-208ENST00000572270 TDO2P48775 406 aa15.44■□□□□ 0.06
CCDC40-208ENST00000572270 MFSD10Q14728 455 aa15.44■□□□□ 0.06
CCDC40-208ENST00000572270 PTPN21Q16825 1174 aa15.44■□□□□ 0.06
CCDC40-208ENST00000572270 NEDD1Q8NHV4 660 aa15.44■□□□□ 0.06
CCDC40-208ENST00000572270 RIPOR3Q96MK2 946 aa15.44■□□□□ 0.06
CCDC40-208ENST00000572270 RANBP17Q9H2T7 1088 aaKnown RBP15.44■□□□□ 0.06
CCDC40-208ENST00000572270 MED19A0JLT2 244 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-208ENST00000572270 GSG1L2A8MUP6 293 aa15.43■□□□□ 0.06
CCDC40-208ENST00000572270 COASYQ13057 564 aa15.43■□□□□ 0.06
CCDC40-208ENST00000572270 KIAA0753Q2KHM9 967 aa15.43■□□□□ 0.06
CCDC40-208ENST00000572270 CCDC96Q2M329 555 aa15.43■□□□□ 0.06
CCDC40-208ENST00000572270 DGLUCYQ7Z3D6 616 aa15.43■□□□□ 0.06
CCDC40-208ENST00000572270 FRMD5Q7Z6J6 570 aa15.43■□□□□ 0.06
CCDC40-208ENST00000572270 STRBPQ96SI9 672 aaKnown RBP15.43■□□□□ 0.06
CCDC40-208ENST00000572270 STX8Q9UNK0 236 aa15.43■□□□□ 0.06
CCDC40-208ENST00000572270 MTMR7Q9Y216 660 aa15.43■□□□□ 0.06
CCDC40-208ENST00000572270 USP15Q9Y4E8 981 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-208ENST00000572270 ZNF316A6NFI3 1004 aaPredicted RBP15.42■□□□□ 0.06
CCDC40-208ENST00000572270 RBAK-RBAKDNI3L0D1 243 aa15.42■□□□□ 0.06
CCDC40-208ENST00000572270 RPS6P62753 249 aaKnown RBP15.42■□□□□ 0.06
CCDC40-208ENST00000572270 TFAP4Q01664 338 aa15.42■□□□□ 0.06
CCDC40-208ENST00000572270 ARHGAP1Q07960 439 aa15.42■□□□□ 0.06
CCDC40-208ENST00000572270 LY6KQ17RY6 165 aa15.42■□□□□ 0.06
CCDC40-208ENST00000572270 CEP85Q6P2H3 762 aa15.42■□□□□ 0.06
CCDC40-208ENST00000572270 CCDC62Q6P9F0 684 aa15.42■□□□□ 0.06
CCDC40-208ENST00000572270 KIF1BPQ96EK5 621 aa15.42■□□□□ 0.06
CCDC40-208ENST00000572270 ADGRA3Q8IWK6 1321 aa15.42■□□□□ 0.06
CCDC40-208ENST00000572270 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.41■□□□□ 0.06
CCDC40-208ENST00000572270 RGS20O76081 388 aa15.41■□□□□ 0.06
CCDC40-208ENST00000572270 F2P00734 622 aa15.41■□□□□ 0.06
CCDC40-208ENST00000572270 PDGFBP01127 241 aaPredicted RBP15.41■□□□□ 0.06
CCDC40-208ENST00000572270 ZNF286BP0CG31 522 aa15.41■□□□□ 0.06
CCDC40-208ENST00000572270 ZNF200P98182 395 aaPredicted RBP15.41■□□□□ 0.06
CCDC40-208ENST00000572270 ZKSCAN2Q63HK3 967 aa15.41■□□□□ 0.06
CCDC40-208ENST00000572270 SEPT14Q6ZU15 432 aa15.41■□□□□ 0.06
CCDC40-208ENST00000572270 ITPRIPQ8IWB1 547 aa15.41■□□□□ 0.06
CCDC40-208ENST00000572270 EFHBQ8N7U6 833 aa15.41■□□□□ 0.06
CCDC40-208ENST00000572270 APBB2Q92870 758 aa15.41■□□□□ 0.06
CCDC40-208ENST00000572270 HAUS7Q99871 368 aa15.41■□□□□ 0.06
CCDC40-208ENST00000572270 CLEC1BQ9P126 229 aa15.41■□□□□ 0.06
CCDC40-208ENST00000572270 PNMA2Q9UL42 364 aa15.41■□□□□ 0.06
CCDC40-208ENST00000572270 APPP05067 770 aa15.4■□□□□ 0.06
CCDC40-208ENST00000572270 SLC3A2P08195 630 aaKnown RBP15.4■□□□□ 0.06
CCDC40-208ENST00000572270 ATP5JP18859 108 aa15.4■□□□□ 0.06
CCDC40-208ENST00000572270 SERINC5Q86VE9 423 aa15.4■□□□□ 0.06
CCDC40-208ENST00000572270 FTSJ3Q8IY81 847 aaKnown RBP15.4■□□□□ 0.06
CCDC40-208ENST00000572270 PLVAPQ9BX97 442 aa15.4■□□□□ 0.06
CCDC40-208ENST00000572270 BARX2Q9UMQ3 279 aaPredicted RBP15.4■□□□□ 0.06
CCDC40-208ENST00000572270 KIAA1217Q5T5P2 1943 aa15.39■□□□□ 0.05
CCDC40-208ENST00000572270 HAS3O00219 553 aa15.39■□□□□ 0.05
CCDC40-208ENST00000572270 ATF7P17544 494 aaPredicted RBP15.39■□□□□ 0.05
CCDC40-208ENST00000572270 SLC16A2P36021 539 aa15.39■□□□□ 0.05
CCDC40-208ENST00000572270 SYDE2Q5VT97 1194 aa15.39■□□□□ 0.05
CCDC40-208ENST00000572270 RASGRP2Q7LDG7 609 aa15.39■□□□□ 0.05
CCDC40-208ENST00000572270 DCAF4Q8WV16 495 aa15.39■□□□□ 0.05
CCDC40-208ENST00000572270 CLEC4DQ8WXI8 215 aa15.39■□□□□ 0.05
CCDC40-208ENST00000572270 CLP1Q92989 425 aaKnown RBP15.39■□□□□ 0.05
CCDC40-208ENST00000572270 DMXL1Q9Y485 3027 aa15.38■□□□□ 0.05
CCDC40-208ENST00000572270 CTSHP09668 335 aa15.38■□□□□ 0.05
CCDC40-208ENST00000572270 LINC00271P0C7V0 271 aa15.38■□□□□ 0.05
CCDC40-208ENST00000572270 GNAT2P19087 354 aa15.38■□□□□ 0.05
CCDC40-208ENST00000572270 NRIP1P48552 1158 aa15.38■□□□□ 0.05
CCDC40-208ENST00000572270 BTG3Q14201 252 aaPredicted RBP15.38■□□□□ 0.05
CCDC40-208ENST00000572270 ADGRD2Q7Z7M1 963 aa15.38■□□□□ 0.05
CCDC40-208ENST00000572270 TMEM105Q8N8V8 129 aa15.38■□□□□ 0.05
CCDC40-208ENST00000572270 PPTC7Q8NI37 304 aa15.38■□□□□ 0.05
CCDC40-208ENST00000572270 ATP6V0A1Q93050 837 aa15.38■□□□□ 0.05
CCDC40-208ENST00000572270 EPB41L4AQ9HCS5 686 aaPredicted RBP15.38■□□□□ 0.05
CCDC40-208ENST00000572270 PLAGL2Q9UPG8 496 aa15.38■□□□□ 0.05
CCDC40-208ENST00000572270 TSPY2A6NKD2 308 aa15.37■□□□□ 0.05
CCDC40-208ENST00000572270 CAND2O75155 1236 aa15.37■□□□□ 0.05
CCDC40-208ENST00000572270 LAMC2Q13753 1193 aa15.37■□□□□ 0.05
CCDC40-208ENST00000572270 P2RX5Q93086 422 aa15.37■□□□□ 0.05
CCDC40-208ENST00000572270 EMID1Q96A84 441 aaPredicted RBP15.37■□□□□ 0.05
CCDC40-208ENST00000572270 RMDN1Q96DB5 314 aa15.37■□□□□ 0.05
CCDC40-208ENST00000572270 CNTNAP3BQ96NU0 1288 aa15.37■□□□□ 0.05
CCDC40-208ENST00000572270 CNTNAP3Q9BZ76 1288 aa15.37■□□□□ 0.05
CCDC40-208ENST00000572270 C17orf102A2RUQ5 167 aa15.36■□□□□ 0.05
CCDC40-208ENST00000572270 GLP2RO95838 553 aa15.36■□□□□ 0.05
CCDC40-208ENST00000572270 MTMR3Q13615 1198 aa15.36■□□□□ 0.05
CCDC40-208ENST00000572270 CAMK1Q14012 370 aa15.36■□□□□ 0.05
CCDC40-208ENST00000572270 STXBP2Q15833 593 aa15.36■□□□□ 0.05
CCDC40-208ENST00000572270 NAALADL2Q58DX5 795 aa15.36■□□□□ 0.05
CCDC40-208ENST00000572270 TTBK2Q6IQ55 1244 aa15.36■□□□□ 0.05
CCDC40-208ENST00000572270 BTNL9Q6UXG8 535 aa15.36■□□□□ 0.05
CCDC40-208ENST00000572270 RBM23Q86U06 439 aaKnown RBP15.36■□□□□ 0.05
CCDC40-208ENST00000572270 UBALD2Q8IYN6 164 aa15.36■□□□□ 0.05
CCDC40-208ENST00000572270 MYH7BA7E2Y1 1941 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms