RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 COLQQ9Y215 455 aaPredicted RBP10.03□□□□□ -0.8
SMG6-210ENST00000572205 ARID2Q68CP9 1835 aa10.03□□□□□ -0.8
SMG6-210ENST00000572205 SPTBN5Q9NRC6 3674 aaKnown RBP10.02□□□□□ -0.8
SMG6-210ENST00000572205 TRIM43BA6NCK2 446 aa10.02□□□□□ -0.81
SMG6-210ENST00000572205 EVI5O60447 810 aa10.02□□□□□ -0.81
SMG6-210ENST00000572205 CD4P01730 458 aa10.02□□□□□ -0.81
SMG6-210ENST00000572205 SYN1P17600 705 aa10.02□□□□□ -0.81
SMG6-210ENST00000572205 UBA1P22314 1058 aaKnown RBP10.02□□□□□ -0.81
SMG6-210ENST00000572205 METAP2P50579 478 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMG6-210ENST00000572205 PURAQ00577 322 aaKnown RBP10.02□□□□□ -0.81
SMG6-210ENST00000572205 PFKFB3Q16875 520 aaPredicted RBP10.02□□□□□ -0.81
SMG6-210ENST00000572205 PPP1R18Q6NYC8 613 aa10.02□□□□□ -0.81
SMG6-210ENST00000572205 FAM126BQ8IXS8 530 aa10.02□□□□□ -0.81
SMG6-210ENST00000572205 CCDC82Q8N4S0 544 aa10.02□□□□□ -0.81
SMG6-210ENST00000572205 SCFD2Q8WU76 684 aa10.02□□□□□ -0.81
SMG6-210ENST00000572205 KAT2BQ92831 832 aa10.02□□□□□ -0.81
SMG6-210ENST00000572205 TRIM43Q96BQ3 446 aaPredicted RBP10.02□□□□□ -0.81
SMG6-210ENST00000572205 BARHL2Q9NY43 387 aa10.02□□□□□ -0.81
SMG6-210ENST00000572205 RBM27Q9P2N5 1060 aaKnown RBP10.02□□□□□ -0.81
SMG6-210ENST00000572205 DDX41Q9UJV9 622 aaKnown RBP10.02□□□□□ -0.81
SMG6-210ENST00000572205 ELP1O95163 1332 aa10.02□□□□□ -0.81
SMG6-210ENST00000572205 LOXHD1Q8IVV2 1947 aa10.01□□□□□ -0.81
SMG6-210ENST00000572205 ESYT2A0FGR8 921 aa10.01□□□□□ -0.81
SMG6-210ENST00000572205 GCOM1H8Y6P7 765 aaPredicted RBP10.01□□□□□ -0.81
SMG6-210ENST00000572205 CTDNEP1O95476 244 aa10.01□□□□□ -0.81
SMG6-210ENST00000572205 MMP3P08254 477 aa10.01□□□□□ -0.81
SMG6-210ENST00000572205 POLR2MP0CAP2 368 aa10.01□□□□□ -0.81
SMG6-210ENST00000572205 IFNAR1P17181 557 aa10.01□□□□□ -0.81
SMG6-210ENST00000572205 ICAM3P32942 547 aa10.01□□□□□ -0.81
SMG6-210ENST00000572205 MAGEA10P43363 369 aaPredicted RBP10.01□□□□□ -0.81
SMG6-210ENST00000572205 TLE2Q04725 743 aa10.01□□□□□ -0.81
SMG6-210ENST00000572205 FAAP100Q0VG06 881 aa10.01□□□□□ -0.81
SMG6-210ENST00000572205 PPP2R5BQ15173 497 aa10.01□□□□□ -0.81
SMG6-210ENST00000572205 LY6KQ17RY6 165 aa10.01□□□□□ -0.81
SMG6-210ENST00000572205 CXCL17Q6UXB2 119 aa10.01□□□□□ -0.81
SMG6-210ENST00000572205 CHRDL2Q6WN34 429 aa10.01□□□□□ -0.81
SMG6-210ENST00000572205 DPF3Q92784 378 aa10.01□□□□□ -0.81
SMG6-210ENST00000572205 PHKBQ93100 1093 aa10.01□□□□□ -0.81
SMG6-210ENST00000572205 TPCN1Q9ULQ1 816 aa10.01□□□□□ -0.81
SMG6-210ENST00000572205 UNC80Q8N2C7 3258 aa10□□□□□ -0.81
SMG6-210ENST00000572205 M0R2N6 131 aa10□□□□□ -0.81
SMG6-210ENST00000572205 KIAA0355O15063 1070 aa10□□□□□ -0.81
SMG6-210ENST00000572205 NKRFO15226 690 aaKnown RBP eCLIP10□□□□□ -0.81
SMG6-210ENST00000572205 DYNC1LI2O43237 492 aaPredicted RBP10□□□□□ -0.81
SMG6-210ENST00000572205 DTNBO60941 627 aa10□□□□□ -0.81
SMG6-210ENST00000572205 PPFIA3O75145 1194 aa10□□□□□ -0.81
SMG6-210ENST00000572205 EIF3JO75822 258 aaKnown RBP10□□□□□ -0.81
SMG6-210ENST00000572205 ITGB5P18084 799 aa10□□□□□ -0.81
SMG6-210ENST00000572205 PSMA5P28066 241 aa10□□□□□ -0.81
SMG6-210ENST00000572205 HOXC8P31273 242 aa10□□□□□ -0.81
SMG6-210ENST00000572205 BMP8BP34820 402 aa10□□□□□ -0.81
SMG6-210ENST00000572205 AK2P54819 239 aa10□□□□□ -0.81
SMG6-210ENST00000572205 PSMC6P62333 389 aa10□□□□□ -0.81
SMG6-210ENST00000572205 SCRN1Q12765 414 aa10□□□□□ -0.81
SMG6-210ENST00000572205 HIC1Q14526 733 aa10□□□□□ -0.81
SMG6-210ENST00000572205 STXBP2Q15833 593 aa10□□□□□ -0.81
SMG6-210ENST00000572205 GNASQ5JWF2 1037 aa10□□□□□ -0.81
SMG6-210ENST00000572205 ARHGEF16Q5VV41 709 aa10□□□□□ -0.81
SMG6-210ENST00000572205 PCNX4Q63HM2 1172 aa10□□□□□ -0.81
SMG6-210ENST00000572205 HEATR3Q7Z4Q2 680 aa10□□□□□ -0.81
SMG6-210ENST00000572205 PARP9Q8IXQ6 854 aa10□□□□□ -0.81
SMG6-210ENST00000572205 ZNF274Q96GC6 653 aaPredicted RBP10□□□□□ -0.81
SMG6-210ENST00000572205 MS4A3Q96HJ5 214 aa10□□□□□ -0.81
SMG6-210ENST00000572205 RNF26Q9BY78 433 aaPredicted RBP10□□□□□ -0.81
SMG6-210ENST00000572205 RIC8AQ9NPQ8 531 aa10□□□□□ -0.81
SMG6-210ENST00000572205 STARD7Q9NQZ5 370 aa10□□□□□ -0.81
SMG6-210ENST00000572205 CYP46A1Q9Y6A2 500 aa10□□□□□ -0.81
SMG6-210ENST00000572205 V9GY48 417 aaPredicted RBP10□□□□□ -0.81
SMG6-210ENST00000572205 MICAL3Q7RTP6 2002 aa10□□□□□ -0.81
SMG6-210ENST00000572205 hCG_1984214I3L0E3 225 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 ARVCFO00192 962 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 HAS3O00219 553 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 SOX1O00570 391 aaPredicted RBP9.99□□□□□ -0.81
SMG6-210ENST00000572205 PRPF3O43395 683 aaKnown RBP9.99□□□□□ -0.81
SMG6-210ENST00000572205 F2P00734 622 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 TXNP10599 105 aaKnown RBP9.99□□□□□ -0.81
SMG6-210ENST00000572205 SCG2P13521 617 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 CD44P16070 742 aaKnown RBP9.99□□□□□ -0.81
SMG6-210ENST00000572205 KCNA2P16389 499 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 FXR1P51114 621 aaKnown RBP eCLIP9.99□□□□□ -0.81
SMG6-210ENST00000572205 EPHB4P54760 987 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 TTLL4Q14679 1199 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 HSDL1Q3SXM5 330 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 HABP4Q5JVS0 413 aaKnown RBP9.99□□□□□ -0.81
SMG6-210ENST00000572205 MYSM1Q5VVJ2 828 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 SEPT14Q6ZU15 432 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 FCHSD1Q86WN1 690 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 TEX2Q8IWB9 1127 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 PIP4P2Q8N4L2 257 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 ZNF713Q8N859 430 aaPredicted RBP9.99□□□□□ -0.81
SMG6-210ENST00000572205 PCSK9Q8NBP7 692 aaKnown RBP9.99□□□□□ -0.81
SMG6-210ENST00000572205 OR6J1Q8NGC5 347 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 PPP1R13LQ8WUF5 828 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 AFG1LQ8WV93 481 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 PGBD1Q96JS3 809 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 TOX2Q96NM4 488 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 AIFM3Q96NN9 605 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 ZMYND12Q9H0C1 365 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 TMEM260Q9NX78 707 aa9.99□□□□□ -0.81
SMG6-210ENST00000572205 SEC63Q9UGP8 760 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms