RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 LY6KQ17RY6 165 aa15.94■□□□□ 0.14
RPAIN-211ENST00000572174 ANKRD33Q7Z3H0 272 aa15.94■□□□□ 0.14
RPAIN-211ENST00000572174 IL31RAQ8NI17 732 aa15.94■□□□□ 0.14
RPAIN-211ENST00000572174 GTF3C6Q969F1 213 aa15.94■□□□□ 0.14
RPAIN-211ENST00000572174 SENP7Q9BQF6 1050 aa15.94■□□□□ 0.14
RPAIN-211ENST00000572174 MTG1Q9BT17 334 aaPredicted RBP15.94■□□□□ 0.14
RPAIN-211ENST00000572174 MLXIPQ9HAP2 919 aa15.94■□□□□ 0.14
RPAIN-211ENST00000572174 ARVCFO00192 962 aa15.93■□□□□ 0.14
RPAIN-211ENST00000572174 NOP56O00567 594 aaKnown RBP15.93■□□□□ 0.14
RPAIN-211ENST00000572174 ARIH2O95376 493 aa15.93■□□□□ 0.14
RPAIN-211ENST00000572174 SREBF1P36956 1147 aa15.93■□□□□ 0.14
RPAIN-211ENST00000572174 CLK2P49760 499 aaKnown RBP15.93■□□□□ 0.14
RPAIN-211ENST00000572174 NLRP5P59047 1200 aa15.93■□□□□ 0.14
RPAIN-211ENST00000572174 MRPS9P82933 396 aaKnown RBP15.93■□□□□ 0.14
RPAIN-211ENST00000572174 PURAQ00577 322 aaKnown RBP15.93■□□□□ 0.14
RPAIN-211ENST00000572174 ARHGAP1Q07960 439 aa15.93■□□□□ 0.14
RPAIN-211ENST00000572174 TRIM60Q495X7 471 aa15.93■□□□□ 0.14
RPAIN-211ENST00000572174 CELF3Q5SZQ8 465 aaKnown RBP15.93■□□□□ 0.14
RPAIN-211ENST00000572174 TYW1BQ6NUM6 668 aa15.93■□□□□ 0.14
RPAIN-211ENST00000572174 CXCL17Q6UXB2 119 aa15.93■□□□□ 0.14
RPAIN-211ENST00000572174 LARP6Q9BRS8 491 aaKnown RBP15.93■□□□□ 0.14
RPAIN-211ENST00000572174 WDR81Q562E7 1941 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 SPATA31C2B4DYI2 1134 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 H0YGN5 161 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 GGPS1O95749 300 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 MMP3P08254 477 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 MYL3P08590 195 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 CLTBP09497 229 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 UBA1P22314 1058 aaKnown RBP15.92■□□□□ 0.14
RPAIN-211ENST00000572174 ZNF76P36508 570 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 MCM2P49736 904 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 SETQ01105 290 aaPredicted RBP15.92■□□□□ 0.14
RPAIN-211ENST00000572174 MTMR1Q13613 665 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 ITGA7Q13683 1181 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 ME3Q16798 604 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 METTL7BQ6UX53 244 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 NIPA1Q7RTP0 329 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 DAGLBQ8NCG7 672 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 LBHD1Q9BQE6 289 aaPredicted RBP15.92■□□□□ 0.14
RPAIN-211ENST00000572174 BRMS1Q9HCU9 246 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 VPS54Q9P1Q0 977 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 PCDHA4Q9UN74 947 aa15.92■□□□□ 0.14
RPAIN-211ENST00000572174 PQBP1O60828 265 aaKnown RBP15.91■□□□□ 0.14
RPAIN-211ENST00000572174 PPFIA4O75335 1185 aa15.91■□□□□ 0.14
RPAIN-211ENST00000572174 RGS20O76081 388 aa15.91■□□□□ 0.14
RPAIN-211ENST00000572174 ARHGAP4P98171 946 aa15.91■□□□□ 0.14
RPAIN-211ENST00000572174 PTPN11Q06124 597 aaPredicted RBP15.91■□□□□ 0.14
RPAIN-211ENST00000572174 TRIM29Q14134 588 aa15.91■□□□□ 0.14
RPAIN-211ENST00000572174 MYSM1Q5VVJ2 828 aa15.91■□□□□ 0.14
RPAIN-211ENST00000572174 NFRKBQ6P4R8 1299 aa15.91■□□□□ 0.14
RPAIN-211ENST00000572174 AFG1LQ8WV93 481 aa15.91■□□□□ 0.14
RPAIN-211ENST00000572174 COPS5Q92905 334 aa15.91■□□□□ 0.14
RPAIN-211ENST00000572174 SPATA33Q96N06 139 aa15.91■□□□□ 0.14
RPAIN-211ENST00000572174 LLPHQ9BRT6 129 aaKnown RBP15.91■□□□□ 0.14
RPAIN-211ENST00000572174 JADE2Q9NQC1 790 aa15.91■□□□□ 0.14
RPAIN-211ENST00000572174 RTEL1Q9NZ71 1219 aa15.91■□□□□ 0.14
RPAIN-211ENST00000572174 ORC3Q9UBD5 711 aaPredicted RBP15.91■□□□□ 0.14
RPAIN-211ENST00000572174 TCEAL9Q9UHQ7 104 aa15.91■□□□□ 0.14
RPAIN-211ENST00000572174 KIF3AQ9Y496 699 aa15.91■□□□□ 0.14
RPAIN-211ENST00000572174 UBIAD1Q9Y5Z9 338 aa15.91■□□□□ 0.14
RPAIN-211ENST00000572174 DNAH12Q6ZR08 3092 aa15.9■□□□□ 0.14
RPAIN-211ENST00000572174 CYP3A4P08684 503 aa15.9■□□□□ 0.14
RPAIN-211ENST00000572174 SUPT20HL2P0C7V6 817 aa15.9■□□□□ 0.14
RPAIN-211ENST00000572174 HOXD8P13378 290 aaPredicted RBP15.9■□□□□ 0.14
RPAIN-211ENST00000572174 HMGN5P82970 282 aaKnown RBP15.9■□□□□ 0.14
RPAIN-211ENST00000572174 TLE2Q04725 743 aa15.9■□□□□ 0.14
RPAIN-211ENST00000572174 CEP55Q53EZ4 464 aa15.9■□□□□ 0.14
RPAIN-211ENST00000572174 JAKMIP3Q5VZ66 844 aa15.9■□□□□ 0.14
RPAIN-211ENST00000572174 TBC1D32Q96NH3 1257 aa15.9■□□□□ 0.14
RPAIN-211ENST00000572174 MXRA8Q9BRK3 442 aa15.9■□□□□ 0.14
RPAIN-211ENST00000572174 A0A1W2PPC1 479 aa15.89■□□□□ 0.13
RPAIN-211ENST00000572174 KRT25Q7Z3Z0 450 aa15.89■□□□□ 0.13
RPAIN-211ENST00000572174 BLIDQ8IZY5 108 aa15.89■□□□□ 0.13
RPAIN-211ENST00000572174 SLC43A3Q8NBI5 491 aa15.89■□□□□ 0.13
RPAIN-211ENST00000572174 SDF4Q9BRK5 362 aa15.89■□□□□ 0.13
RPAIN-211ENST00000572174 PRDM5Q9NQX1 630 aaPredicted RBP15.89■□□□□ 0.13
RPAIN-211ENST00000572174 ZNF215Q9UL58 517 aaPredicted RBP15.89■□□□□ 0.13
RPAIN-211ENST00000572174 TRIP12Q14669 1992 aaPredicted RBP15.89■□□□□ 0.13
RPAIN-211ENST00000572174 NFASCO94856 1347 aa15.89■□□□□ 0.13
RPAIN-211ENST00000572174 TANC1Q9C0D5 1861 aa15.88■□□□□ 0.13
RPAIN-211ENST00000572174 PPFIA3O75145 1194 aa15.88■□□□□ 0.13
RPAIN-211ENST00000572174 ITGB5P18084 799 aa15.88■□□□□ 0.13
RPAIN-211ENST00000572174 CDK7P50613 346 aa15.88■□□□□ 0.13
RPAIN-211ENST00000572174 USP11P51784 963 aa15.88■□□□□ 0.13
RPAIN-211ENST00000572174 TMEM63BQ5T3F8 832 aa15.88■□□□□ 0.13
RPAIN-211ENST00000572174 FAM126BQ8IXS8 530 aa15.88■□□□□ 0.13
RPAIN-211ENST00000572174 KIF2CQ99661 725 aa15.88■□□□□ 0.13
RPAIN-211ENST00000572174 NAP1L4Q99733 375 aaKnown RBP15.88■□□□□ 0.13
RPAIN-211ENST00000572174 ALG1Q9BT22 464 aa15.88■□□□□ 0.13
RPAIN-211ENST00000572174 PDLIM7Q9NR12 457 aa15.88■□□□□ 0.13
RPAIN-211ENST00000572174 TMEM39AQ9NV64 488 aa15.88■□□□□ 0.13
RPAIN-211ENST00000572174 TMEM260Q9NX78 707 aa15.88■□□□□ 0.13
RPAIN-211ENST00000572174 ZMYND8Q9ULU4 1186 aaPredicted RBP15.88■□□□□ 0.13
RPAIN-211ENST00000572174 CCDC194A0A1B0GVG4 234 aa15.87■□□□□ 0.13
RPAIN-211ENST00000572174 KIAA0355O15063 1070 aa15.87■□□□□ 0.13
RPAIN-211ENST00000572174 F2P00734 622 aa15.87■□□□□ 0.13
RPAIN-211ENST00000572174 RAG1P15918 1043 aa15.87■□□□□ 0.13
RPAIN-211ENST00000572174 IRX5P78411 483 aaPredicted RBP15.87■□□□□ 0.13
RPAIN-211ENST00000572174 NONOQ15233 471 aaKnown RBP eCLIP15.87■□□□□ 0.13
RPAIN-211ENST00000572174 FAM47CQ5HY64 1035 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms