RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 RAVER2Q9HCJ3 691 aaKnown RBP11.39□□□□□ -0.59
GDE1-205ENST00000569899 MRVI1Q9Y6F6 885 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 ABCB11O95342 1321 aa11.39□□□□□ -0.59
GDE1-205ENST00000569899 VWA5AO00534 786 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 CXCL11O14625 94 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 MEIS2O14770 477 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 MBD3O95983 291 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 ME1P48163 572 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 TRAPPC10P48553 1259 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 MRPL12P52815 198 aaKnown RBP11.38□□□□□ -0.59
GDE1-205ENST00000569899 MOGSQ13724 837 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 SLC39A14Q15043 492 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 AGERQ15109 404 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 ZNF174Q15697 407 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 CST9Q5W186 159 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 BPHLQ86WA6 291 aaPredicted RBP11.38□□□□□ -0.59
GDE1-205ENST00000569899 C2orf69Q8N8R5 385 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 REPS2Q8NFH8 660 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 TBCKQ8TEA7 893 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 SLC10A4Q96EP9 437 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 P2RX7Q99572 595 aaKnown RBP11.38□□□□□ -0.59
GDE1-205ENST00000569899 PCDHA7Q9UN72 937 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 MYPNQ86TC9 1320 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 ZBED4O75132 1171 aa11.38□□□□□ -0.59
GDE1-205ENST00000569899 SKOR2Q2VWA4 1001 aaPredicted RBP11.38□□□□□ -0.59
GDE1-205ENST00000569899 CTDP1Q9Y5B0 961 aaPredicted RBP11.38□□□□□ -0.59
GDE1-205ENST00000569899 GOLGA6L4A6NEF3 574 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 UNCXA6NJT0 531 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 POM121CA8CG34 1229 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 NFIBO00712 420 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 PPP6R2O75170 966 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 ALAS1P13196 640 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 LIG1P18858 919 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 HOXA13P31271 388 aaPredicted RBP11.37□□□□□ -0.59
GDE1-205ENST00000569899 MCM7P33993 719 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 TRAF1Q13077 416 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 COG2Q14746 738 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 MUM1L1Q5H9M0 696 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 CAVIN1Q6NZI2 390 aaKnown RBP11.37□□□□□ -0.59
GDE1-205ENST00000569899 NEK8Q86SG6 692 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 TBC1D5Q92609 795 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 ANO3Q9BYT9 981 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 GLT8D2Q9H1C3 349 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 GOLPH3LQ9H4A5 285 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 HOMER2Q9NSB8 354 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 FBXO2Q9UK22 296 aaPredicted RBP11.37□□□□□ -0.59
GDE1-205ENST00000569899 ADAMTS5Q9UNA0 930 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 CEP131Q9UPN4 1083 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 AGTPBP1Q9UPW5 1226 aa11.37□□□□□ -0.59
GDE1-205ENST00000569899 MRPL11Q9Y3B7 192 aaKnown RBP11.37□□□□□ -0.59
GDE1-205ENST00000569899 PASKQ96RG2 1323 aa11.36□□□□□ -0.59
GDE1-205ENST00000569899 EDIL3O43854 480 aa11.36□□□□□ -0.59
GDE1-205ENST00000569899 CFBP00751 764 aa11.36□□□□□ -0.59
GDE1-205ENST00000569899 GRIN1Q05586 938 aa11.36□□□□□ -0.59
GDE1-205ENST00000569899 AP3B2Q13367 1082 aa11.36□□□□□ -0.59
GDE1-205ENST00000569899 SNAPC2Q13487 334 aa11.36□□□□□ -0.59
GDE1-205ENST00000569899 TMEM132BQ14DG7 1078 aa11.36□□□□□ -0.59
GDE1-205ENST00000569899 LETM2Q2VYF4 491 aa11.36□□□□□ -0.59
GDE1-205ENST00000569899 AXDND1Q5T1B0 1012 aaPredicted RBP11.36□□□□□ -0.59
GDE1-205ENST00000569899 ZNF598Q86UK7 904 aaKnown RBP11.36□□□□□ -0.59
GDE1-205ENST00000569899 JMYQ8N9B5 988 aa11.36□□□□□ -0.59
GDE1-205ENST00000569899 CLEC4DQ8WXI8 215 aa11.36□□□□□ -0.59
GDE1-205ENST00000569899 CLIC6Q96NY7 704 aa11.36□□□□□ -0.59
GDE1-205ENST00000569899 ANP32EQ9BTT0 268 aa11.36□□□□□ -0.59
GDE1-205ENST00000569899 GZF1Q9H116 711 aaPredicted RBP11.36□□□□□ -0.59
GDE1-205ENST00000569899 TMEM63CQ9P1W3 806 aa11.36□□□□□ -0.59
GDE1-205ENST00000569899 ZNF214Q9UL59 606 aaPredicted RBP11.36□□□□□ -0.59
GDE1-205ENST00000569899 LRRC37A2A6NM11 1700 aa11.36□□□□□ -0.59
GDE1-205ENST00000569899 PIK3CDO00329 1044 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 PEX10O60683 326 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 TDP2O95551 362 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 BMP15O95972 392 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 HOXA7P31268 230 aaPredicted RBP11.35□□□□□ -0.59
GDE1-205ENST00000569899 HUNKP57058 714 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 IRX3P78415 501 aaPredicted RBP11.35□□□□□ -0.59
GDE1-205ENST00000569899 ATP2C1P98194 919 aaPredicted RBP11.35□□□□□ -0.59
GDE1-205ENST00000569899 ZNF697Q5TEC3 545 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 SNRNP48Q6IEG0 339 aaKnown RBP11.35□□□□□ -0.59
GDE1-205ENST00000569899 GPAT2Q6NUI2 795 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 CCAR1Q8IX12 1150 aaKnown RBP11.35□□□□□ -0.59
GDE1-205ENST00000569899 FSIP1Q8NA03 581 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 ADAM32Q8TC27 787 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 ASCC2Q9H1I8 757 aaPredicted RBP11.35□□□□□ -0.59
GDE1-205ENST00000569899 RNF146Q9NTX7 359 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 RIPK3Q9Y572 518 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 PLXNB2O15031 1838 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 SPDYE3A6NKU9 549 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 GCOM1H8Y6P7 765 aaPredicted RBP11.35□□□□□ -0.59
GDE1-205ENST00000569899 CCNT1O60563 726 aaKnown RBP11.35□□□□□ -0.59
GDE1-205ENST00000569899 POLR2MP0CAP2 368 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 OAZ1P54368 228 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 ADALQ6DHV7 355 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 FASTKD5Q7L8L6 764 aaKnown RBP11.35□□□□□ -0.59
GDE1-205ENST00000569899 FCHSD1Q86WN1 690 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 MRPS27Q92552 414 aaKnown RBP11.35□□□□□ -0.59
GDE1-205ENST00000569899 TMEM60Q9H2L4 133 aa11.35□□□□□ -0.59
GDE1-205ENST00000569899 MORC2Q9Y6X9 1032 aaPredicted RBP11.35□□□□□ -0.59
GDE1-205ENST00000569899 KIAA1217Q5T5P2 1943 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 CCL15-CCL14A0A0B4J2E2 113 aa11.34□□□□□ -0.59
GDE1-205ENST00000569899 A0A1W2PQ27 194 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms