RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 PCNX4Q63HM2 1172 aa25.25■■□□□ 1.63
VCPKMT-205ENST00000569518 RNF207Q6ZRF8 634 aa25.25■■□□□ 1.63
VCPKMT-205ENST00000569518 SPC24Q8NBT2 197 aa25.25■■□□□ 1.63
VCPKMT-205ENST00000569518 ERMNQ8TAM6 284 aa25.25■■□□□ 1.63
VCPKMT-205ENST00000569518 OTUD5Q96G74 571 aa25.25■■□□□ 1.63
VCPKMT-205ENST00000569518 MXRA8Q9BRK3 442 aa25.25■■□□□ 1.63
VCPKMT-205ENST00000569518 TEX13BQ9BXU2 312 aa25.25■■□□□ 1.63
VCPKMT-205ENST00000569518 GDAQ9Y2T3 454 aa25.25■■□□□ 1.63
VCPKMT-205ENST00000569518 STK24Q9Y6E0 443 aa25.25■■□□□ 1.63
VCPKMT-205ENST00000569518 POTEB3A0JP26 581 aa25.24■■□□□ 1.63
VCPKMT-205ENST00000569518 ESPNB1AK53 854 aa25.24■■□□□ 1.63
VCPKMT-205ENST00000569518 BCRP11274 1271 aa25.24■■□□□ 1.63
VCPKMT-205ENST00000569518 ITGB5P18084 799 aa25.24■■□□□ 1.63
VCPKMT-205ENST00000569518 ASIC1P78348 528 aa25.24■■□□□ 1.63
VCPKMT-205ENST00000569518 NCAPH2Q6IBW4 605 aa25.24■■□□□ 1.63
VCPKMT-205ENST00000569518 POTEBQ6S5H4 581 aa25.24■■□□□ 1.63
VCPKMT-205ENST00000569518 NIPA1Q7RTP0 329 aa25.24■■□□□ 1.63
VCPKMT-205ENST00000569518 ZSCAN30Q86W11 494 aa25.24■■□□□ 1.63
VCPKMT-205ENST00000569518 PROCA1Q8NCQ7 364 aaPredicted RBP25.24■■□□□ 1.63
VCPKMT-205ENST00000569518 GIMAP8Q8ND71 665 aaPredicted RBP25.24■■□□□ 1.63
VCPKMT-205ENST00000569518 KCNH4Q9UQ05 1017 aa25.24■■□□□ 1.63
VCPKMT-205ENST00000569518 CXCL11O14625 94 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 SPATA31C1P0DKV0 1188 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 RPA1P27694 616 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 FANCCQ00597 558 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 PPP2R5CQ13362 524 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 DHX8Q14562 1220 aaKnown RBP25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 SPATA1Q5VX52 437 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 KLHL10Q6JEL2 608 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 POTEEQ6S8J3 1075 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 OTOP1Q7RTM1 612 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 CATSPER3Q86XQ3 398 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 TAAR1Q96RJ0 339 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 IFNKQ9P0W0 207 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 KIAA1024Q9UPX6 916 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 ARP10275 920 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 HOXA7P31268 230 aaPredicted RBP25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 PPIL2Q13356 520 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 TTLL12Q14166 644 aaPredicted RBP25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 TKFCQ3LXA3 575 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 LRCH2Q5VUJ6 765 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 XPO4Q9C0E2 1151 aaKnown RBP25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 LRRC27Q9C0I9 530 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 UBIAD1Q9Y5Z9 338 aa25.23■■□□□ 1.63
VCPKMT-205ENST00000569518 EML1O00423 815 aa25.22■■□□□ 1.63
VCPKMT-205ENST00000569518 PRCPP42785 496 aa25.22■■□□□ 1.63
VCPKMT-205ENST00000569518 MRPS9P82933 396 aaKnown RBP25.22■■□□□ 1.63
VCPKMT-205ENST00000569518 LDLRAD1Q5T700 205 aa25.22■■□□□ 1.63
VCPKMT-205ENST00000569518 NSMFQ6X4W1 530 aa25.22■■□□□ 1.63
VCPKMT-205ENST00000569518 ADSSL1Q8N142 457 aa25.22■■□□□ 1.63
VCPKMT-205ENST00000569518 ZFP91Q96JP5 570 aaPredicted RBP25.22■■□□□ 1.63
VCPKMT-205ENST00000569518 MAF1Q9H063 256 aa25.22■■□□□ 1.63
VCPKMT-205ENST00000569518 RWDD2AQ9UIY3 292 aa25.22■■□□□ 1.63
VCPKMT-205ENST00000569518 CTNND2Q9UQB3 1225 aa25.22■■□□□ 1.63
VCPKMT-205ENST00000569518 PVALEFA0A1B0GWK0 134 aa25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 GOLGA6L6A8MZA4 724 aa25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 POTEIP0CG38 1075 aa25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 POTEJP0CG39 1038 aa25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 PGM5Q15124 567 aa25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 B3GNT9Q6UX72 402 aa25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 ARMC9Q7Z3E5 817 aa25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 POLR3CQ9BUI4 534 aaPredicted RBP25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 GTPBP4Q9BZE4 634 aaKnown RBP25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 PXMP2Q9NR77 195 aa25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 EXOC1Q9NV70 894 aa25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 ZKSCAN5Q9Y2L8 839 aa25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 POTEFA5A3E0 1075 aa25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 E9PMD0 336 aa25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 PAK1Q13153 545 aa25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 BAATQ14032 418 aaPredicted RBP25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 POTEGQ6S5H5 508 aa25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 UNC13DQ70J99 1090 aa25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 CCDC47Q96A33 483 aaKnown RBP25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 ZNF577Q9BSK1 485 aa25.21■■□□□ 1.63
VCPKMT-205ENST00000569518 STX17P56962 302 aa25.2■■□□□ 1.62
VCPKMT-205ENST00000569518 LBX2Q6XYB7 198 aa25.2■■□□□ 1.62
VCPKMT-205ENST00000569518 RMDN3Q96TC7 470 aa25.2■■□□□ 1.62
VCPKMT-205ENST00000569518 RIT2Q99578 217 aa25.2■■□□□ 1.62
VCPKMT-205ENST00000569518 PDCD2LQ9BRP1 358 aa25.2■■□□□ 1.62
VCPKMT-205ENST00000569518 SAMSN1Q9NSI8 373 aaKnown RBP25.2■■□□□ 1.62
VCPKMT-205ENST00000569518 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.2■■□□□ 1.62
VCPKMT-205ENST00000569518 LCTP09848 1927 aa25.2■■□□□ 1.62
VCPKMT-205ENST00000569518 IPO5O00410 1097 aaKnown RBP25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 GAS7O60861 476 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 EIF2AK2P19525 551 aaKnown RBP25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 EHHADHQ08426 723 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 PDE4DQ08499 809 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 MOGSQ13724 837 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 COBLL1Q53SF7 1204 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 CDKAL1Q5VV42 579 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 GADL1Q6ZQY3 521 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 DRC7Q8IY82 874 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 NELFBQ8WX92 580 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 DDX12PQ92771 950 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 DNAJC19Q96DA6 116 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 HSD17B14Q9BPX1 270 aa25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 EIF2AK1Q9BQI3 630 aaKnown RBP25.19■■□□□ 1.62
VCPKMT-205ENST00000569518 WDR11Q9BZH6 1224 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms