RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 SYN2Q92777 582 aaPredicted RBP23.78■■□□□ 1.4
DENND4A-208ENST00000568515 TLR2O60603 784 aa23.77■■□□□ 1.4
DENND4A-208ENST00000568515 PSMD2Q13200 908 aa23.77■■□□□ 1.4
DENND4A-208ENST00000568515 NAB2Q15742 525 aa23.77■■□□□ 1.4
DENND4A-208ENST00000568515 SLC10A5Q5PT55 438 aa23.77■■□□□ 1.4
DENND4A-208ENST00000568515 BICDL1Q6ZP65 573 aa23.77■■□□□ 1.4
DENND4A-208ENST00000568515 REXO1Q8N1G1 1221 aaKnown RBP23.77■■□□□ 1.4
DENND4A-208ENST00000568515 GLIS3Q8NEA6 775 aa23.77■■□□□ 1.4
DENND4A-208ENST00000568515 PIK3R5Q8WYR1 880 aa23.77■■□□□ 1.4
DENND4A-208ENST00000568515 RAD54LQ92698 747 aa23.77■■□□□ 1.4
DENND4A-208ENST00000568515 RNPC3Q96LT9 517 aaKnown RBP23.77■■□□□ 1.4
DENND4A-208ENST00000568515 YY1AP1Q9H869 796 aa23.77■■□□□ 1.4
DENND4A-208ENST00000568515 VAT1LQ9HCJ6 419 aa23.77■■□□□ 1.4
DENND4A-208ENST00000568515 TMEM260Q9NX78 707 aa23.77■■□□□ 1.4
DENND4A-208ENST00000568515 SEC63Q9UGP8 760 aaKnown RBP23.77■■□□□ 1.4
DENND4A-208ENST00000568515 USP17L2Q6R6M4 530 aa23.77■■□□□ 1.4
DENND4A-208ENST00000568515 CD302Q8IX05 232 aa23.77■■□□□ 1.4
DENND4A-208ENST00000568515 DDX12PQ92771 950 aa23.77■■□□□ 1.4
DENND4A-208ENST00000568515 LUC7LQ9NQ29 371 aaKnown RBP23.77■■□□□ 1.4
DENND4A-208ENST00000568515 GRID2IPA4D2P6 1211 aa23.77■■□□□ 1.39
DENND4A-208ENST00000568515 ZEB2O60315 1214 aa23.77■■□□□ 1.39
DENND4A-208ENST00000568515 NOL4O94818 638 aa23.77■■□□□ 1.39
DENND4A-208ENST00000568515 FTCDO95954 541 aa23.77■■□□□ 1.39
DENND4A-208ENST00000568515 HOXA7P31268 230 aaPredicted RBP23.77■■□□□ 1.39
DENND4A-208ENST00000568515 DNA2P51530 1060 aa23.77■■□□□ 1.39
DENND4A-208ENST00000568515 EHHADHQ08426 723 aa23.77■■□□□ 1.39
DENND4A-208ENST00000568515 FAM83BQ5T0W9 1011 aa23.77■■□□□ 1.39
DENND4A-208ENST00000568515 EMC10Q5UCC4 262 aa23.77■■□□□ 1.39
DENND4A-208ENST00000568515 FOXR2Q6PJQ5 311 aa23.77■■□□□ 1.39
DENND4A-208ENST00000568515 PROM2Q8N271 834 aa23.77■■□□□ 1.39
DENND4A-208ENST00000568515 TGFBRAP1Q8WUH2 860 aa23.77■■□□□ 1.39
DENND4A-208ENST00000568515 ATXN2Q99700 1313 aaKnown RBP23.76■■□□□ 1.39
DENND4A-208ENST00000568515 GUCY2FP51841 1108 aa23.76■■□□□ 1.39
DENND4A-208ENST00000568515 TMEM266Q2M3C6 531 aa23.76■■□□□ 1.39
DENND4A-208ENST00000568515 CASKIN2Q8WXE0 1202 aa23.76■■□□□ 1.39
DENND4A-208ENST00000568515 KRT12Q99456 494 aa23.76■■□□□ 1.39
DENND4A-208ENST00000568515 COL4A3BPQ9Y5P4 624 aa23.76■■□□□ 1.39
DENND4A-208ENST00000568515 ZPR1O75312 459 aa23.76■■□□□ 1.39
DENND4A-208ENST00000568515 LDHBP07195 334 aaKnown RBP23.76■■□□□ 1.39
DENND4A-208ENST00000568515 LSP1P33241 339 aa23.76■■□□□ 1.39
DENND4A-208ENST00000568515 FBXW10Q5XX13 1052 aa23.76■■□□□ 1.39
DENND4A-208ENST00000568515 MCTP2Q6DN12 878 aa23.76■■□□□ 1.39
DENND4A-208ENST00000568515 PIGSQ96S52 555 aa23.76■■□□□ 1.39
DENND4A-208ENST00000568515 KLRC1P26715 233 aa23.75■■□□□ 1.39
DENND4A-208ENST00000568515 MEI1Q5TIA1 1274 aa23.75■■□□□ 1.39
DENND4A-208ENST00000568515 SPATS2Q86XZ4 545 aaKnown RBP23.75■■□□□ 1.39
DENND4A-208ENST00000568515 ATP6V0A2Q9Y487 856 aa23.75■■□□□ 1.39
DENND4A-208ENST00000568515 HNRNPH1P31943 449 aaKnown RBP23.75■■□□□ 1.39
DENND4A-208ENST00000568515 FKBP3Q00688 224 aaKnown RBP23.75■■□□□ 1.39
DENND4A-208ENST00000568515 CDC37Q16543 378 aaPredicted RBP23.75■■□□□ 1.39
DENND4A-208ENST00000568515 MYOCDQ8IZQ8 938 aa23.75■■□□□ 1.39
DENND4A-208ENST00000568515 WHAMMQ8TF30 809 aa23.75■■□□□ 1.39
DENND4A-208ENST00000568515 INPP4AQ96PE3 977 aaPredicted RBP23.75■■□□□ 1.39
DENND4A-208ENST00000568515 NUDT12Q9BQG2 462 aa23.75■■□□□ 1.39
DENND4A-208ENST00000568515 LRRC27Q9C0I9 530 aa23.75■■□□□ 1.39
DENND4A-208ENST00000568515 EPN3Q9H201 632 aa23.75■■□□□ 1.39
DENND4A-208ENST00000568515 SAP30BPQ9UHR5 308 aaKnown RBP23.75■■□□□ 1.39
DENND4A-208ENST00000568515 POTEMA6NI47 508 aa23.74■■□□□ 1.39
DENND4A-208ENST00000568515 SLC37A4O43826 429 aa23.74■■□□□ 1.39
DENND4A-208ENST00000568515 GUCY1A3Q02108 690 aa23.74■■□□□ 1.39
DENND4A-208ENST00000568515 PDIA5Q14554 519 aa23.74■■□□□ 1.39
DENND4A-208ENST00000568515 CCDC40Q4G0X9 1142 aa23.74■■□□□ 1.39
DENND4A-208ENST00000568515 KCNK18Q7Z418 384 aa23.74■■□□□ 1.39
DENND4A-208ENST00000568515 TBC1D5Q92609 795 aa23.74■■□□□ 1.39
DENND4A-208ENST00000568515 LSM14BQ9BX40 385 aaKnown RBP23.74■■□□□ 1.39
DENND4A-208ENST00000568515 RAB34Q9BZG1 259 aa23.74■■□□□ 1.39
DENND4A-208ENST00000568515 PCDHGC5Q9Y5F6 944 aa23.74■■□□□ 1.39
DENND4A-208ENST00000568515 ESYT2A0FGR8 921 aa23.74■■□□□ 1.39
DENND4A-208ENST00000568515 TRAF5O00463 557 aa23.74■■□□□ 1.39
DENND4A-208ENST00000568515 BAG3O95817 575 aa23.74■■□□□ 1.39
DENND4A-208ENST00000568515 POLR2FP61218 127 aaKnown RBP23.74■■□□□ 1.39
DENND4A-208ENST00000568515 ZCWPW2Q504Y3 356 aa23.74■■□□□ 1.39
DENND4A-208ENST00000568515 SNX29Q8TEQ0 813 aa23.74■■□□□ 1.39
DENND4A-208ENST00000568515 POLD4Q9HCU8 107 aa23.74■■□□□ 1.39
DENND4A-208ENST00000568515 KIAA0754O94854 1291 aa23.73■■□□□ 1.39
DENND4A-208ENST00000568515 NR1D1P20393 614 aa23.73■■□□□ 1.39
DENND4A-208ENST00000568515 SMARCA1P28370 1054 aa23.73■■□□□ 1.39
DENND4A-208ENST00000568515 PDE4CQ08493 712 aa23.73■■□□□ 1.39
DENND4A-208ENST00000568515 DIXDC1Q155Q3 683 aa23.73■■□□□ 1.39
DENND4A-208ENST00000568515 SLC18A3Q16572 532 aa23.73■■□□□ 1.39
DENND4A-208ENST00000568515 SWT1Q5T5J6 900 aaKnown RBP23.73■■□□□ 1.39
DENND4A-208ENST00000568515 KRT79Q5XKE5 535 aa23.73■■□□□ 1.39
DENND4A-208ENST00000568515 OTUD6BQ8N6M0 293 aa23.73■■□□□ 1.39
DENND4A-208ENST00000568515 C1orf131Q8NDD1 294 aaKnown RBP23.73■■□□□ 1.39
DENND4A-208ENST00000568515 CEP89Q96ST8 783 aa23.73■■□□□ 1.39
DENND4A-208ENST00000568515 COL14A1Q05707 1796 aaKnown RBP23.73■■□□□ 1.39
DENND4A-208ENST00000568515 TDP2O95551 362 aa23.73■■□□□ 1.39
DENND4A-208ENST00000568515 MAPKAPK5Q8IW41 473 aa23.73■■□□□ 1.39
DENND4A-208ENST00000568515 NLRP3Q96P20 1036 aa23.73■■□□□ 1.39
DENND4A-208ENST00000568515 EYA3Q99504 573 aa23.73■■□□□ 1.39
DENND4A-208ENST00000568515 ZNF287Q9HBT7 754 aa23.73■■□□□ 1.39
DENND4A-208ENST00000568515 PACSIN2Q9UNF0 486 aaPredicted RBP23.73■■□□□ 1.39
DENND4A-208ENST00000568515 MEFVO15553 781 aaPredicted RBP23.72■■□□□ 1.39
DENND4A-208ENST00000568515 PPP4CP60510 307 aa23.72■■□□□ 1.39
DENND4A-208ENST00000568515 TRADDQ15628 312 aa23.72■■□□□ 1.39
DENND4A-208ENST00000568515 TMEM119Q4V9L6 283 aa23.72■■□□□ 1.39
DENND4A-208ENST00000568515 ATP6V1G3Q96LB4 118 aa23.72■■□□□ 1.39
DENND4A-208ENST00000568515 EDIL3O43854 480 aa23.72■■□□□ 1.39
DENND4A-208ENST00000568515 RNASE9P60153 205 aaKnown RBP23.72■■□□□ 1.39
DENND4A-208ENST00000568515 IRX3P78415 501 aaPredicted RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms