RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 RHOXF2BP0C7M4 288 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 TNFRSF8P28908 595 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 PRDX5P30044 214 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 USP8P40818 1118 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 ARHGAP25P42331 645 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 CDK8P49336 464 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 TNNC1P63316 161 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 GOLGA8FQ08AF8 430 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 GOLGA8DPQ0D2H9 430 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 AP3B2Q13367 1082 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 CCDC40Q4G0X9 1142 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 EARS2Q5JPH6 523 aaKnown RBP8.45□□□□□ -1.06
ATXN3-250ENST00000568290 MICALCLQ6ZW33 695 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 METTL3Q86U44 580 aaKnown RBP8.45□□□□□ -1.06
ATXN3-250ENST00000568290 SMYD4Q8IYR2 804 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-250ENST00000568290 MYOCDQ8IZQ8 938 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 ARFGAP2Q8N6H7 521 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 CNBD1Q8NA66 436 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 ACRBPQ8NEB7 543 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 FAM76AQ8TAV0 307 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 COG1Q8WTW3 980 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 TATDN2Q93075 761 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 PURBQ96QR8 312 aaKnown RBP8.45□□□□□ -1.06
ATXN3-250ENST00000568290 MED15Q96RN5 788 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 RHOXF2Q9BQY4 288 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 RIOX1Q9H6W3 641 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 EHMT1Q9H9B1 1298 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 METTL14Q9HCE5 456 aaKnown RBP8.45□□□□□ -1.06
ATXN3-250ENST00000568290 ABCB6Q9NP58 842 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 CEP72Q9P209 647 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 VPS18Q9P253 973 aa8.45□□□□□ -1.06
ATXN3-250ENST00000568290 MYO5AQ9Y4I1 1855 aaKnown RBP8.45□□□□□ -1.06
ATXN3-250ENST00000568290 SLIT2O94813 1529 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 GOLGA6BA6NDN3 693 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 ERICH4A6NGS2 130 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 UBE2Q2LH0YL09 131 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 CETN3O15182 167 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 PJA2O43164 708 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 TOM1O60784 492 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 GFPT2O94808 682 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 ERLIN2O94905 339 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 SEC31AO94979 1220 aaKnown RBP8.44□□□□□ -1.06
ATXN3-250ENST00000568290 TTLL1O95922 423 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 SERPING1P05155 500 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 IL1R1P14778 569 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 RASA1P20936 1047 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 BTDP43251 543 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 MAGEA1P43355 309 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 NOVP48745 357 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 USP11P51784 963 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 PAK2Q13177 524 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 MTF1Q14872 753 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 VPS72Q15906 364 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 CDC37Q16543 378 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-250ENST00000568290 TXNRD1Q16881 649 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 EDRF1Q3B7T1 1238 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 NAALADL2Q58DX5 795 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 SFMBT2Q5VUG0 894 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 TBC1D9BQ66K14 1250 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 BICDL1Q6ZP65 573 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 CROCCP2Q86T23 111 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 PACS2Q86VP3 889 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 SYCE1Q8N0S2 351 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 TBCKQ8TEA7 893 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 TGFBRAP1Q8WUH2 860 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 RAD54LQ92698 747 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 GPKOWQ92917 476 aaPredicted RBP eCLIP8.44□□□□□ -1.06
ATXN3-250ENST00000568290 TANGO6Q9C0B7 1094 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 MMRN2Q9H8L6 949 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 PDE11AQ9HCR9 933 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 PODXL2Q9NZ53 605 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 SYNPO2Q9UMS6 1093 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 SNX12Q9UMY4 172 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 GDAQ9Y2T3 454 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 PCDHA13Q9Y5I0 950 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 COL4A3BPQ9Y5P4 624 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 PITPNM2Q9BZ72 1349 aa8.44□□□□□ -1.06
ATXN3-250ENST00000568290 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.43□□□□□ -1.06
ATXN3-250ENST00000568290 MYH2Q9UKX2 1941 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 KAT6BQ8WYB5 2073 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 CYP2D7A0A087X1C5 515 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 hCG_1642624A0A1W2PR95 340 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 SRRM3A6NNA2 597 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-250ENST00000568290 BTNL10A8MVZ5 291 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 SNAP23O00161 211 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 CALUO43852 315 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-250ENST00000568290 KRT18P05783 430 aaKnown RBP8.43□□□□□ -1.06
ATXN3-250ENST00000568290 USP17L8P0C7I0 530 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 MUTP22033 750 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 TECP42680 631 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 NAP1L1P55209 391 aaKnown RBP8.43□□□□□ -1.06
ATXN3-250ENST00000568290 MARSP56192 900 aaKnown RBP8.43□□□□□ -1.06
ATXN3-250ENST00000568290 TDRD12Q587J7 1177 aaKnown RBP8.43□□□□□ -1.06
ATXN3-250ENST00000568290 DNAJC21Q5F1R6 531 aaKnown RBP8.43□□□□□ -1.06
ATXN3-250ENST00000568290 HYIQ5T013 277 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 ANKRD40Q6AI12 368 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 NUDT18Q6ZVK8 323 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 B4GALNT4Q76KP1 1039 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 LAPTM4BQ86VI4 370 aa8.43□□□□□ -1.06
ATXN3-250ENST00000568290 C1orf131Q8NDD1 294 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms