RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 PRC1O43663 620 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 CTNND1O60716 968 aaKnown RBP9.08□□□□□ -0.96
SMG1-214ENST00000568038 HMGB1P09429 215 aaKnown RBP9.08□□□□□ -0.96
SMG1-214ENST00000568038 RPS6KB1P23443 525 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 MCM5P33992 734 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 IREB2P48200 963 aaKnown RBP9.08□□□□□ -0.96
SMG1-214ENST00000568038 AFF1P51825 1210 aaKnown RBP9.08□□□□□ -0.96
SMG1-214ENST00000568038 ANTXR2P58335 489 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 SEPT2Q15019 361 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 RAB3GAP1Q15042 981 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 SWI5Q1ZZU3 235 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 CST9Q5W186 159 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 RUFY3Q7L099 469 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 CLEC10AQ8IUN9 316 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 C2orf69Q8N8R5 385 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMG1-214ENST00000568038 ZKSCAN4Q969J2 545 aaPredicted RBP9.08□□□□□ -0.96
SMG1-214ENST00000568038 NACC1Q96RE7 527 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 UBAC1Q9BSL1 405 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 TM6SF1Q9BZW5 370 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 GBA2Q9HCG7 927 aaPredicted RBP9.08□□□□□ -0.96
SMG1-214ENST00000568038 PDRG1Q9NUG6 133 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.08□□□□□ -0.96
SMG1-214ENST00000568038 ZNF112Q9UJU3 913 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 CYP46A1Q9Y6A2 500 aa9.08□□□□□ -0.96
SMG1-214ENST00000568038 ZBTB42B2RXF5 422 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 GUCY1A2P33402 732 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 NEK4P51957 841 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 RAC1P63000 192 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 FGD1P98174 961 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 EXOSC10Q01780 885 aaKnown RBP9.07□□□□□ -0.96
SMG1-214ENST00000568038 ATP2B2Q01814 1243 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 NAA30Q147X3 362 aaPredicted RBP9.07□□□□□ -0.96
SMG1-214ENST00000568038 PCSK7Q16549 785 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.07□□□□□ -0.96
SMG1-214ENST00000568038 TMEM179Q6ZVK1 233 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 CCDC84Q86UT8 332 aaPredicted RBP9.07□□□□□ -0.96
SMG1-214ENST00000568038 IQCA1Q86XH1 822 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 SCYL3Q8IZE3 742 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 IL17RAQ96F46 866 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 CLMNQ96JQ2 1002 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 SAP130Q9H0E3 1048 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 PICK1Q9NRD5 415 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 ZBTB21Q9ULJ3 1066 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 CSADQ9Y600 493 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 MYH8P13535 1937 aa9.07□□□□□ -0.96
SMG1-214ENST00000568038 PASKQ96RG2 1323 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 ERICH2A1L162 156 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 XYLBO75191 536 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 MAP3K6O95382 1288 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 ASNSP08243 561 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 FSTL1Q12841 308 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 VGLL4Q14135 290 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 ELOAQ14241 798 aaKnown RBP9.06□□□□□ -0.96
SMG1-214ENST00000568038 SART3Q15020 963 aaKnown RBP9.06□□□□□ -0.96
SMG1-214ENST00000568038 RABEP1Q15276 862 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 MAP3K11Q16584 847 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 TMEM67Q5HYA8 995 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 ELMSAN1Q6PJG2 1045 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 CAPN12Q6ZSI9 719 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 Q6ZUG5 572 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 NOL8Q76FK4 1167 aaKnown RBP9.06□□□□□ -0.96
SMG1-214ENST00000568038 ANKRD13AQ8IZ07 590 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 CEP95Q96GE4 821 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 KANSL2Q9H9L4 492 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 ELP3Q9H9T3 547 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 IL17RBQ9NRM6 502 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 CLIP2Q9UDT6 1046 aa9.06□□□□□ -0.96
SMG1-214ENST00000568038 TNKSO95271 1327 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 PLIN4Q96Q06 1357 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 IGKV6D-41A0A0C4DH26 115 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 SH2B2O14492 632 aaPredicted RBP9.05□□□□□ -0.96
SMG1-214ENST00000568038 EEF2P13639 858 aaKnown RBP9.05□□□□□ -0.96
SMG1-214ENST00000568038 PTPRAP18433 802 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 NT5C2P49902 561 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 FKBP1BP68106 108 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 ICA1Q05084 483 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 WTAPQ15007 396 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 SEC23AQ15436 765 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 OCLNQ16625 522 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 CCDC178Q5BJE1 867 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 PERM1Q5SV97 790 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 NOL9Q5SY16 702 aaKnown RBP9.05□□□□□ -0.96
SMG1-214ENST00000568038 LDLRAD1Q5T700 205 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 IFIT1BQ5T764 474 aaKnown RBP9.05□□□□□ -0.96
SMG1-214ENST00000568038 NFXL1Q6ZNB6 911 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 ENAHQ8N8S7 591 aaPredicted RBP9.05□□□□□ -0.96
SMG1-214ENST00000568038 IGDCC4Q8TDY8 1250 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 CHMP4CQ96CF2 233 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 CCDC97Q96F63 343 aaPredicted RBP9.05□□□□□ -0.96
SMG1-214ENST00000568038 TMEM87BQ96K49 555 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 GINM1Q9NU53 330 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 TCP11L1Q9NUJ3 509 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 MTMR4Q9NYA4 1195 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 NAP1L2Q9ULW6 460 aaPredicted RBP9.05□□□□□ -0.96
SMG1-214ENST00000568038 STX8Q9UNK0 236 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 MTMR7Q9Y216 660 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 SNCAIPQ9Y6H5 919 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 WDR19Q8NEZ3 1342 aa9.05□□□□□ -0.96
SMG1-214ENST00000568038 TRPM7Q96QT4 1865 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms