RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 NR3C2P08235 984 aa18.07■□□□□ 0.48
PALB2-205ENST00000567003 MYCLP12524 364 aaPredicted RBP18.07■□□□□ 0.48
PALB2-205ENST00000567003 IKBKEQ14164 716 aa18.07■□□□□ 0.48
PALB2-205ENST00000567003 MCF2L2Q86YR7 1114 aa18.07■□□□□ 0.48
PALB2-205ENST00000567003 DHX37Q8IY37 1157 aaKnown RBP18.07■□□□□ 0.48
PALB2-205ENST00000567003 ENAHQ8N8S7 591 aaPredicted RBP18.07■□□□□ 0.48
PALB2-205ENST00000567003 PPTC7Q8NI37 304 aa18.07■□□□□ 0.48
PALB2-205ENST00000567003 EMID1Q96A84 441 aaPredicted RBP18.07■□□□□ 0.48
PALB2-205ENST00000567003 KATNAL1Q9BW62 490 aa18.07■□□□□ 0.48
PALB2-205ENST00000567003 LMCD1Q9NZU5 365 aa18.07■□□□□ 0.48
PALB2-205ENST00000567003 PPP1R11O60927 126 aaPredicted RBP18.06■□□□□ 0.48
PALB2-205ENST00000567003 LGR5O75473 907 aa18.06■□□□□ 0.48
PALB2-205ENST00000567003 EIF3JO75822 258 aaKnown RBP18.06■□□□□ 0.48
PALB2-205ENST00000567003 RGS20O76081 388 aa18.06■□□□□ 0.48
PALB2-205ENST00000567003 PARP1P09874 1014 aaKnown RBP18.06■□□□□ 0.48
PALB2-205ENST00000567003 SDSP20132 328 aa18.06■□□□□ 0.48
PALB2-205ENST00000567003 KCNA5P22460 613 aa18.06■□□□□ 0.48
PALB2-205ENST00000567003 RRP1P56182 461 aaKnown RBP18.06■□□□□ 0.48
PALB2-205ENST00000567003 LAMC2Q13753 1193 aa18.06■□□□□ 0.48
PALB2-205ENST00000567003 ASPRV1Q53RT3 343 aa18.06■□□□□ 0.48
PALB2-205ENST00000567003 STAG2Q8N3U4 1231 aa18.06■□□□□ 0.48
PALB2-205ENST00000567003 IL31RAQ8NI17 732 aa18.06■□□□□ 0.48
PALB2-205ENST00000567003 GPKOWQ92917 476 aaPredicted RBP eCLIP18.06■□□□□ 0.48
PALB2-205ENST00000567003 ZSCAN10Q96SZ4 725 aaPredicted RBP18.06■□□□□ 0.48
PALB2-205ENST00000567003 PARNO95453 639 aaKnown RBP18.05■□□□□ 0.48
PALB2-205ENST00000567003 IL9P15248 144 aa18.05■□□□□ 0.48
PALB2-205ENST00000567003 HOXA13P31271 388 aaPredicted RBP18.05■□□□□ 0.48
PALB2-205ENST00000567003 THPOP40225 353 aa18.05■□□□□ 0.48
PALB2-205ENST00000567003 HSDL1Q3SXM5 330 aa18.05■□□□□ 0.48
PALB2-205ENST00000567003 IQCA1Q86XH1 822 aa18.05■□□□□ 0.48
PALB2-205ENST00000567003 MYOCDQ8IZQ8 938 aa18.05■□□□□ 0.48
PALB2-205ENST00000567003 FBXO22Q8NEZ5 403 aa18.05■□□□□ 0.48
PALB2-205ENST00000567003 DBF4BQ8NFT6 615 aa18.05■□□□□ 0.48
PALB2-205ENST00000567003 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.05■□□□□ 0.48
PALB2-205ENST00000567003 ANKS1AQ92625 1134 aa18.05■□□□□ 0.48
PALB2-205ENST00000567003 OSBPL7Q9BZF2 842 aa18.05■□□□□ 0.48
PALB2-205ENST00000567003 MYO7AQ13402 2215 aa18.04■□□□□ 0.48
PALB2-205ENST00000567003 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.04■□□□□ 0.48
PALB2-205ENST00000567003 GPR37L1O60883 481 aa18.04■□□□□ 0.48
PALB2-205ENST00000567003 GGPS1O95749 300 aa18.04■□□□□ 0.48
PALB2-205ENST00000567003 HOXD8P13378 290 aaPredicted RBP18.04■□□□□ 0.48
PALB2-205ENST00000567003 HSD17B4P51659 736 aa18.04■□□□□ 0.48
PALB2-205ENST00000567003 SP2Q02086 613 aa18.04■□□□□ 0.48
PALB2-205ENST00000567003 MKRN4PQ13434 485 aaPredicted RBP18.04■□□□□ 0.48
PALB2-205ENST00000567003 MYSM1Q5VVJ2 828 aa18.04■□□□□ 0.48
PALB2-205ENST00000567003 CWC27Q6UX04 472 aaKnown RBP18.04■□□□□ 0.48
PALB2-205ENST00000567003 SPATA33Q96N06 139 aa18.04■□□□□ 0.48
PALB2-205ENST00000567003 PDCD2LQ9BRP1 358 aa18.04■□□□□ 0.48
PALB2-205ENST00000567003 BCAS3Q9H6U6 928 aa18.04■□□□□ 0.48
PALB2-205ENST00000567003 ZSWIM5Q9P217 1185 aa18.04■□□□□ 0.48
PALB2-205ENST00000567003 BAZ2BQ9UIF8 2168 aaKnown RBP18.04■□□□□ 0.48
PALB2-205ENST00000567003 DOCK5Q9H7D0 1870 aa18.03■□□□□ 0.48
PALB2-205ENST00000567003 PIEZO1Q92508 2521 aa18.03■□□□□ 0.48
PALB2-205ENST00000567003 PI4K2BG5E9Z4 385 aa18.03■□□□□ 0.48
PALB2-205ENST00000567003 EFCAB14O75071 495 aa18.03■□□□□ 0.48
PALB2-205ENST00000567003 UBA1P22314 1058 aaKnown RBP18.03■□□□□ 0.48
PALB2-205ENST00000567003 HDAC1Q13547 482 aaPredicted RBP18.03■□□□□ 0.48
PALB2-205ENST00000567003 LEXMQ3ZCV2 418 aa18.03■□□□□ 0.48
PALB2-205ENST00000567003 CELF3Q5SZQ8 465 aaKnown RBP18.03■□□□□ 0.48
PALB2-205ENST00000567003 B4GALNT3Q6L9W6 998 aa18.03■□□□□ 0.48
PALB2-205ENST00000567003 MAF1Q9H063 256 aa18.03■□□□□ 0.48
PALB2-205ENST00000567003 C5orf42Q9H799 3197 aa18.02■□□□□ 0.48
PALB2-205ENST00000567003 RSPH10B2B2RC85 870 aa18.02■□□□□ 0.48
PALB2-205ENST00000567003 AMHP03971 560 aa18.02■□□□□ 0.48
PALB2-205ENST00000567003 CTSHP09668 335 aa18.02■□□□□ 0.48
PALB2-205ENST00000567003 RSPH10BP0C881 870 aa18.02■□□□□ 0.48
PALB2-205ENST00000567003 MFAP1P55081 439 aaKnown RBP18.02■□□□□ 0.48
PALB2-205ENST00000567003 C1QBPQ07021 282 aaKnown RBP18.02■□□□□ 0.48
PALB2-205ENST00000567003 SLC35G1Q2M3R5 365 aa18.02■□□□□ 0.48
PALB2-205ENST00000567003 CCDC178Q5BJE1 867 aa18.02■□□□□ 0.48
PALB2-205ENST00000567003 PTCRAQ6ISU1 281 aaPredicted RBP18.02■□□□□ 0.48
PALB2-205ENST00000567003 SERINC5Q86VE9 423 aa18.02■□□□□ 0.48
PALB2-205ENST00000567003 FAM178BQ8IXR5 827 aa18.02■□□□□ 0.48
PALB2-205ENST00000567003 GJD3Q8N144 294 aa18.02■□□□□ 0.48
PALB2-205ENST00000567003 C16orf70Q9BSU1 422 aa18.02■□□□□ 0.48
PALB2-205ENST00000567003 AMNQ9BXJ7 453 aa18.02■□□□□ 0.48
PALB2-205ENST00000567003 INSL6Q9Y581 213 aa18.02■□□□□ 0.48
PALB2-205ENST00000567003 NLRC5Q86WI3 1866 aa18.01■□□□□ 0.47
PALB2-205ENST00000567003 H3BQ06 376 aaPredicted RBP18.01■□□□□ 0.47
PALB2-205ENST00000567003 UPP2O95045 317 aa18.01■□□□□ 0.47
PALB2-205ENST00000567003 SSTR3P32745 418 aaPredicted RBP18.01■□□□□ 0.47
PALB2-205ENST00000567003 HTRA4P83105 476 aaPredicted RBP18.01■□□□□ 0.47
PALB2-205ENST00000567003 PGM5Q15124 567 aa18.01■□□□□ 0.47
PALB2-205ENST00000567003 PLEKHG4Q58EX7 1191 aa18.01■□□□□ 0.47
PALB2-205ENST00000567003 TICAM2Q86XR7 235 aa18.01■□□□□ 0.47
PALB2-205ENST00000567003 SP7Q8TDD2 431 aaPredicted RBP18.01■□□□□ 0.47
PALB2-205ENST00000567003 ATG2AQ2TAZ0 1938 aa18.01■□□□□ 0.47
PALB2-205ENST00000567003 EMSYQ7Z589 1322 aa18■□□□□ 0.47
PALB2-205ENST00000567003 C17orf102A2RUQ5 167 aa18■□□□□ 0.47
PALB2-205ENST00000567003 TREHO43280 583 aa18■□□□□ 0.47
PALB2-205ENST00000567003 PPFIA4O75335 1185 aa18■□□□□ 0.47
PALB2-205ENST00000567003 SMIM10L2AP0DMW4 78 aa18■□□□□ 0.47
PALB2-205ENST00000567003 SMIM10L2BP0DMW5 78 aa18■□□□□ 0.47
PALB2-205ENST00000567003 GHRHRQ02643 423 aa18■□□□□ 0.47
PALB2-205ENST00000567003 EPC2Q52LR7 807 aa18■□□□□ 0.47
PALB2-205ENST00000567003 STOX1Q6ZVD7 989 aa18■□□□□ 0.47
PALB2-205ENST00000567003 VSIG10LQ86VR7 867 aa18■□□□□ 0.47
PALB2-205ENST00000567003 FCHSD1Q86WN1 690 aa18■□□□□ 0.47
PALB2-205ENST00000567003 HOMER1Q86YM7 354 aa18■□□□□ 0.47
PALB2-205ENST00000567003 ATP6V0A1Q93050 837 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms