RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 CCDC25Q86WR0 208 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.13□□□□□ -1.27
LINC01043-201ENST00000565936 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.13□□□□□ -1.27
LINC01043-201ENST00000565936 DISC1Q9NRI5 854 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 IPO11Q9UI26 975 aaKnown RBP7.13□□□□□ -1.27
LINC01043-201ENST00000565936 PCDHA6Q9UN73 950 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 PCDHA8Q9Y5H6 950 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 PNPLA7Q6ZV29 1317 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 EIF3CLB5ME19 914 aaKnown RBP7.13□□□□□ -1.27
LINC01043-201ENST00000565936 ARHGAP6O43182 974 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 CIITAP33076 1130 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 HDLBPQ00341 1268 aaKnown RBP7.13□□□□□ -1.27
LINC01043-201ENST00000565936 LRMPQ12912 555 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 MUM1L1Q5H9M0 696 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 RINT1Q6NUQ1 792 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 PPP4R3CPQ6ZMV5 832 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 PPM1KQ8N3J5 372 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 CCDC127Q96BQ5 260 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 EIF3CQ99613 913 aaKnown RBP7.13□□□□□ -1.27
LINC01043-201ENST00000565936 ATP6V0A4Q9HBG4 840 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 RAVER2Q9HCJ3 691 aaKnown RBP7.13□□□□□ -1.27
LINC01043-201ENST00000565936 SERPINA10Q9UK55 444 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 A6NJR5 290 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 K7ERI5 159 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 WDR46O15213 610 aaKnown RBP7.13□□□□□ -1.27
LINC01043-201ENST00000565936 COG2Q14746 738 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 DAAM2Q86T65 1068 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 PI4K2BQ8TCG2 481 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 MICAL1Q8TDZ2 1067 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 PKNOX2Q96KN3 472 aa7.13□□□□□ -1.27
LINC01043-201ENST00000565936 LRRIQ1Q96JM4 1722 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 F8W8V4 182 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 RGL2O15211 777 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 THAP12O43422 761 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 ORC4O43929 436 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 GMNNO75496 209 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 SLC25A27O95847 323 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 VIMP08670 466 aaKnown RBP7.12□□□□□ -1.27
LINC01043-201ENST00000565936 NSFP46459 744 aaKnown RBP7.12□□□□□ -1.27
LINC01043-201ENST00000565936 CACNB3P54284 484 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 FOXO4P98177 505 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 PRPSAP1Q14558 356 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 EXOC3L4Q17RC7 722 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 ZNF449Q6P9G9 518 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 ANKS4BQ8N8V4 417 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 USP28Q96RU2 1077 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 SMC6Q96SB8 1091 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 MYO1AQ9UBC5 1043 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 STK36Q9NRP7 1315 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 DENND3A2RUS2 1198 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 DPEP1P16444 411 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 XPAP23025 273 aaPredicted RBP7.12□□□□□ -1.27
LINC01043-201ENST00000565936 SPATA1Q5VX52 437 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 OR8K1Q8NGG5 319 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 RSAD2Q8WXG1 361 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 OSBPL5Q9H0X9 879 aaPredicted RBP7.12□□□□□ -1.27
LINC01043-201ENST00000565936 PCDHB4Q9Y5E5 795 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 RIOK3O14730 519 aaKnown RBP7.12□□□□□ -1.27
LINC01043-201ENST00000565936 SLC12A2P55011 1212 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 TMTC3Q6ZXV5 915 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 FAM151AQ8WW52 585 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 STAMQ92783 540 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 LBHD1Q9BQE6 289 aaPredicted RBP7.12□□□□□ -1.27
LINC01043-201ENST00000565936 TMEM47Q9BQJ4 181 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 VPS33BQ9H267 617 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 UBN2Q6ZU65 1347 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 NBPF26B4DH59 902 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 PRELPP51888 382 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 SCARF1Q14162 830 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 NBPF10Q6P3W6 841 aaKnown RBP7.12□□□□□ -1.27
LINC01043-201ENST00000565936 SCYL2Q6P3W7 929 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 FAM173BQ6P4H8 233 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 DSTYKQ6XUX3 929 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 NBPF11Q86T75 865 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 ANKRD13AQ8IZ07 590 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 NBPF15Q8N660 670 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 ZNF280CQ8ND82 737 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 ZNF512BQ96KM6 892 aaPredicted RBP7.12□□□□□ -1.27
LINC01043-201ENST00000565936 CEP63Q96MT8 703 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 NCAPGQ9BPX3 1015 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 SLC39A2Q9NP94 309 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 FAM207AQ9NSI2 230 aaPredicted RBP7.12□□□□□ -1.27
LINC01043-201ENST00000565936 NKIRAS1Q9NYS0 192 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 F5H6K3 240 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 ZBTB16Q05516 673 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 KLRC3Q07444 240 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 GRM4Q14833 912 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 CFAP221Q4G0U5 840 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 IFT20Q8IY31 132 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 FAM186BQ8IYM0 893 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 NSUN7Q8NE18 718 aaKnown RBP7.12□□□□□ -1.27
LINC01043-201ENST00000565936 U2AF1L4Q8WU68 220 aaKnown RBP7.12□□□□□ -1.27
LINC01043-201ENST00000565936 IFT81Q8WYA0 676 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 RPAP3Q9H6T3 665 aaPredicted RBP7.12□□□□□ -1.27
LINC01043-201ENST00000565936 ELP3Q9H9T3 547 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 MTMR6Q9Y217 621 aa7.12□□□□□ -1.27
LINC01043-201ENST00000565936 MXRA7P84157 204 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 PLCB4Q15147 1175 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 RABL6Q3YEC7 729 aaPredicted RBP7.11□□□□□ -1.27
LINC01043-201ENST00000565936 SMC1BQ8NDV3 1235 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms