RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 A0A1W2PRG0 241 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 TMCO5BA8MYB1 307 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 ACTN2P35609 894 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 CCR3P51677 355 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 PABPC4Q13310 644 aaKnown RBP eCLIP3.71□□□□□ -1.82
CHD9-213ENST00000564845 SEPT7Q16181 437 aaKnown RBP3.71□□□□□ -1.82
CHD9-213ENST00000564845 PARP10Q53GL7 1025 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 CAPZA3Q96KX2 299 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 GBP5Q96PP8 586 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 TSG101Q99816 390 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 KIFC3Q9BVG8 833 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 HDAC6Q9UBN7 1215 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 DAGLAQ9Y4D2 1042 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 BCORQ6W2J9 1755 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 DYTNA2CJ06 578 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 CDC42EP1Q00587 391 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 COG2Q14746 738 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 CHADLQ6NUI6 762 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 GJB7Q6PEY0 223 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 FMR1NBQ8N0W7 255 aaPredicted RBP3.71□□□□□ -1.82
CHD9-213ENST00000564845 TSNARE1Q96NA8 513 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 CSRNP1Q96S65 589 aa3.71□□□□□ -1.82
CHD9-213ENST00000564845 SRPRBQ9Y5M8 271 aaKnown RBP3.71□□□□□ -1.82
CHD9-213ENST00000564845 GRAPQ13588 217 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 ALCAMQ13740 583 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 ARMCX5Q6P1M9 558 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 SMARCC2Q8TAQ2 1214 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 GRAPLQ8TC17 118 aaPredicted RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 INTS4Q96HW7 963 aaKnown RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 DDX19AQ9NUU7 478 aaKnown RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 AP3B1O00203 1094 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 ZNF185O15231 689 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 KIF5CO60282 957 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 GH2P01242 217 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 SKILP12757 684 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 FERP16591 822 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 CASP4P49662 377 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 SLMAPQ14BN4 828 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 VPS72Q15906 364 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 GALNT17Q6IS24 598 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 ADAT2Q7Z6V5 191 aaKnown RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 ADGRF4Q8IZF3 695 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 RTFDC1Q9BY42 306 aaPredicted RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 ADAM33Q9BZ11 813 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 RASAL2Q9UJF2 1139 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 FAM184BQ9ULE4 1060 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 ZMYM6O95789 1325 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 CASZ1Q86V15 1759 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 FDX1P10109 184 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 MYBP10242 640 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 EEF2P13639 858 aaKnown RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 RXRBP28702 533 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 RCAN1P53805 252 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 FUT2Q10981 343 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 CFAP58Q5T655 872 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 ZSCAN30Q86W11 494 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 GTF3C2Q8WUA4 911 aaPredicted RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 KHSRPQ92945 711 aaKnown RBP eCLIP3.7□□□□□ -1.825e-7■■■■□ 21.7
CHD9-213ENST00000564845 PARP3Q9Y6F1 533 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 SMCO2A6NFE2 343 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 GOLGA8MH3BSY2 632 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 UQCRFS1P1P0C7P4 283 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 ZSCAN20P17040 1043 aaPredicted RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 RASA1P20936 1047 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 YWHAEP62258 255 aaKnown RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 TROAPQ12815 778 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 NONOQ15233 471 aaKnown RBP eCLIP3.7□□□□□ -1.829e-7■■■■□ 20.8
CHD9-213ENST00000564845 VWA3BQ502W6 1294 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 TTC19Q6DKK2 380 aaPredicted RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 APTXQ7Z2E3 356 aaKnown RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 SDCCAG8Q86SQ7 713 aaPredicted RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 FAM96AQ9H5X1 160 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 MAN1B1Q9UKM7 699 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 THSD7AQ9UPZ6 1657 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 CLCN1P35523 988 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 CRKP46108 304 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 UBASH3AP57075 661 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 SMAD1Q15797 465 aaKnown RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 KRT26Q7Z3Y9 468 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 NOSTRINQ8IVI9 506 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 OGFOD1Q8N543 542 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 PRPF31Q8WWY3 499 aaKnown RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 MRPS27Q92552 414 aaKnown RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 NUP85Q9BW27 656 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 SPTLC3Q9NUV7 552 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 KCNH3Q9ULD8 1083 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 ATRNO75882 1429 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 ANKRD36CQ5JPF3 1778 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 NOP2P46087 812 aaKnown RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 GJC2Q5T442 439 aaPredicted RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 UTP14CQ5TAP6 766 aaKnown RBP3.7□□□□□ -1.82
CHD9-213ENST00000564845 CCDC181Q5TID7 509 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 RRAGBQ5VZM2 374 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 B4GALNT4Q76KP1 1039 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 AGBL1Q96MI9 1066 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 CNPY3Q9BT09 278 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 CLSTN2Q9H4D0 955 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 INTS13Q9NVM9 706 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 CCDC88AQ3V6T2 1871 aa3.7□□□□□ -1.82
CHD9-213ENST00000564845 ARAP2Q8WZ64 1704 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms