RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 IRX3P78415 501 aaPredicted RBP20.25■□□□□ 0.83
COMMD4-208ENST00000563220 DHX8Q14562 1220 aaKnown RBP20.25■□□□□ 0.83
COMMD4-208ENST00000563220 PGM5Q15124 567 aa20.25■□□□□ 0.83
COMMD4-208ENST00000563220 GPAT2Q6NUI2 795 aa20.25■□□□□ 0.83
COMMD4-208ENST00000563220 RAD54LQ92698 747 aa20.25■□□□□ 0.83
COMMD4-208ENST00000563220 C7orf25Q9BPX7 421 aa20.25■□□□□ 0.83
COMMD4-208ENST00000563220 TRIM9Q9C026 710 aa20.25■□□□□ 0.83
COMMD4-208ENST00000563220 ACAD9Q9H845 621 aa20.25■□□□□ 0.83
COMMD4-208ENST00000563220 NMRK2Q9NPI5 230 aa20.25■□□□□ 0.83
COMMD4-208ENST00000563220 PXMP2Q9NR77 195 aa20.25■□□□□ 0.83
COMMD4-208ENST00000563220 UBIAD1Q9Y5Z9 338 aa20.25■□□□□ 0.83
COMMD4-208ENST00000563220 COL11A1P12107 1806 aaPredicted RBP20.25■□□□□ 0.83
COMMD4-208ENST00000563220 SMTNL1A8MU46 457 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 EML1O00423 815 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 IKBKBO14920 756 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 SV2BQ7L1I2 683 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 OTOP1Q7RTM1 612 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 SMYD4Q8IYR2 804 aaPredicted RBP20.24■□□□□ 0.83
COMMD4-208ENST00000563220 LARP4BQ92615 738 aaKnown RBP20.24■□□□□ 0.83
COMMD4-208ENST00000563220 MED15Q96RN5 788 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 PDCD2LQ9BRP1 358 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 WDR11Q9BZH6 1224 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 A1CFQ9NQ94 594 aaKnown RBP20.24■□□□□ 0.83
COMMD4-208ENST00000563220 POTEB3A0JP26 581 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 UNCXA6NJT0 531 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 SETQ01105 290 aaPredicted RBP20.24■□□□□ 0.83
COMMD4-208ENST00000563220 POTEBQ6S5H4 581 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 FASTKD5Q7L8L6 764 aaKnown RBP20.24■□□□□ 0.83
COMMD4-208ENST00000563220 CATSPER3Q86XQ3 398 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 MB21D1Q8N884 522 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 ZNF577Q9BSK1 485 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 HSD3B7Q9H2F3 369 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 CYP39A1Q9NYL5 469 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 KIAA1024Q9UPX6 916 aa20.24■□□□□ 0.83
COMMD4-208ENST00000563220 KDM3AQ9Y4C1 1321 aa20.23■□□□□ 0.83
COMMD4-208ENST00000563220 PPP1R3GB7ZBB8 358 aa20.23■□□□□ 0.83
COMMD4-208ENST00000563220 SPATA31C1P0DKV0 1188 aa20.23■□□□□ 0.83
COMMD4-208ENST00000563220 BCRP11274 1271 aa20.23■□□□□ 0.83
COMMD4-208ENST00000563220 HERVK_113P62684 666 aa20.23■□□□□ 0.83
COMMD4-208ENST00000563220 KMT5BQ4FZB7 885 aa20.23■□□□□ 0.83
COMMD4-208ENST00000563220 LRCH2Q5VUJ6 765 aa20.23■□□□□ 0.83
COMMD4-208ENST00000563220 ARHGEF16Q5VV41 709 aa20.23■□□□□ 0.83
COMMD4-208ENST00000563220 NT5C3AQ9H0P0 336 aa20.23■□□□□ 0.83
COMMD4-208ENST00000563220 GBA2Q9HCG7 927 aaPredicted RBP20.23■□□□□ 0.83
COMMD4-208ENST00000563220 DACH1Q9UI36 760 aa20.23■□□□□ 0.83
COMMD4-208ENST00000563220 MYMKA6NI61 221 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 SLC26A4O43511 780 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 CNMDO75829 334 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 MYCLP12524 364 aaPredicted RBP20.22■□□□□ 0.83
COMMD4-208ENST00000563220 AMPD3Q01432 767 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 MYL5Q02045 173 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 SNAPC2Q13487 334 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 NIPA1Q7RTP0 329 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 RIOX2Q8IUF8 465 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 CHST13Q8NET6 341 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 JADE2Q9NQC1 790 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 KCNH7Q9NS40 1196 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 RMND1Q9NWS8 449 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 LOC285556D6RIA3 1793 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 E9PMD0 336 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 CELF2O95319 508 aaKnown RBP20.22■□□□□ 0.83
COMMD4-208ENST00000563220 RPA1P27694 616 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 KCNB1Q14721 858 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 ZNF658Q5TYW1 1059 aaPredicted RBP20.22■□□□□ 0.83
COMMD4-208ENST00000563220 HAUS3Q68CZ6 603 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 SARM1Q6SZW1 724 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 ERMNQ8TAM6 284 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 ZNF526Q8TF50 670 aaPredicted RBP20.22■□□□□ 0.83
COMMD4-208ENST00000563220 SPATC1LQ9H0A9 340 aa20.22■□□□□ 0.83
COMMD4-208ENST00000563220 IPO5O00410 1097 aaKnown RBP20.21■□□□□ 0.83
COMMD4-208ENST00000563220 GAS7O60861 476 aa20.21■□□□□ 0.83
COMMD4-208ENST00000563220 FKBP1BP68106 108 aa20.21■□□□□ 0.83
COMMD4-208ENST00000563220 PPP2R5CQ13362 524 aa20.21■□□□□ 0.83
COMMD4-208ENST00000563220 B3GNT9Q6UX72 402 aa20.21■□□□□ 0.83
COMMD4-208ENST00000563220 TRIM44Q96DX7 344 aaPredicted RBP20.21■□□□□ 0.83
COMMD4-208ENST00000563220 EIF2AK1Q9BQI3 630 aaKnown RBP20.21■□□□□ 0.83
COMMD4-208ENST00000563220 PAGR1Q9BTK6 254 aa20.21■□□□□ 0.83
COMMD4-208ENST00000563220 TRIM5Q9C035 493 aa20.21■□□□□ 0.83
COMMD4-208ENST00000563220 GDAQ9Y2T3 454 aa20.21■□□□□ 0.83
COMMD4-208ENST00000563220 POTEFA5A3E0 1075 aa20.2■□□□□ 0.82
COMMD4-208ENST00000563220 RHOBTB3O94955 611 aa20.2■□□□□ 0.82
COMMD4-208ENST00000563220 ERCC5P28715 1186 aaPredicted RBP20.2■□□□□ 0.82
COMMD4-208ENST00000563220 ZNF75DP51815 510 aa20.2■□□□□ 0.82
COMMD4-208ENST00000563220 ASIC1P78348 528 aa20.2■□□□□ 0.82
COMMD4-208ENST00000563220 CT47A1Q5JQC4 288 aaPredicted RBP20.2■□□□□ 0.82
COMMD4-208ENST00000563220 POTEGQ6S5H5 508 aa20.2■□□□□ 0.82
COMMD4-208ENST00000563220 VSIG10LQ86VR7 867 aa20.2■□□□□ 0.82
COMMD4-208ENST00000563220 TRMT44Q8IYL2 757 aaKnown RBP20.2■□□□□ 0.82
COMMD4-208ENST00000563220 ENOX1Q8TC92 643 aaKnown RBP20.2■□□□□ 0.82
COMMD4-208ENST00000563220 MAF1Q9H063 256 aa20.2■□□□□ 0.82
COMMD4-208ENST00000563220 R3HDMLQ9H3Y0 253 aa20.2■□□□□ 0.82
COMMD4-208ENST00000563220 TXNRD2Q9NNW7 524 aa20.2■□□□□ 0.82
COMMD4-208ENST00000563220 RGL1Q9NZL6 768 aa20.2■□□□□ 0.82
COMMD4-208ENST00000563220 RBPJLQ9UBG7 517 aa20.2■□□□□ 0.82
COMMD4-208ENST00000563220 STK24Q9Y6E0 443 aa20.2■□□□□ 0.82
COMMD4-208ENST00000563220 ESPNB1AK53 854 aa20.2■□□□□ 0.82
COMMD4-208ENST00000563220 CHMP2AO43633 222 aa20.2■□□□□ 0.82
COMMD4-208ENST00000563220 NR3C2P08235 984 aa20.2■□□□□ 0.82
COMMD4-208ENST00000563220 PSMC6P62333 389 aa20.2■□□□□ 0.82
COMMD4-208ENST00000563220 KLHL10Q6JEL2 608 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms