RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 VPS72Q15906 364 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 TUBB8Q3ZCM7 444 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 ASPRV1Q53RT3 343 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 BEND6Q5SZJ8 279 aaPredicted RBP8.34□□□□□ -1.07
CFDP1-202ENST00000562602 TTI2Q6NXR4 508 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 TRAPPC11Q7Z392 1133 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 KIAA1328Q86T90 577 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 TEX2Q8IWB9 1127 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 FNBP4Q8N3X1 1017 aaPredicted RBP8.34□□□□□ -1.07
CFDP1-202ENST00000562602 LRRN4CLQ8ND94 238 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 CDK5RAP3Q96JB5 506 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 C8orf37Q96NL8 207 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 TSG101Q99816 390 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 TMEM47Q9BQJ4 181 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 TUBGCP2Q9BSJ2 902 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 QTRT2Q9H974 415 aaKnown RBP8.34□□□□□ -1.07
CFDP1-202ENST00000562602 IL17RBQ9NRM6 502 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.34□□□□□ -1.07
CFDP1-202ENST00000562602 RNF14Q9UBS8 474 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 ZHX1Q9UKY1 873 aaPredicted RBP8.34□□□□□ -1.07
CFDP1-202ENST00000562602 SAR1BQ9Y6B6 198 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 MYO3BQ8WXR4 1341 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 IRS2Q9Y4H2 1338 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 MYH6P13533 1939 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 TTC26A0AVF1 554 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 SMCO2A6NFE2 343 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 TRIM66O15016 1216 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 FANCGO15287 622 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 KLRC4O43908 158 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 NMT2O60551 498 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 TACC1O75410 805 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 BBOX1O75936 387 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 GNA14O95837 355 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 IVLP07476 585 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 USP17L8P0C7I0 530 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 GCFC2P16383 781 aaKnown RBP8.33□□□□□ -1.08
CFDP1-202ENST00000562602 RASA1P20936 1047 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 OAS2P29728 719 aaKnown RBP8.33□□□□□ -1.08
CFDP1-202ENST00000562602 TM4SF1P30408 202 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 MTIF2P46199 727 aaKnown RBP8.33□□□□□ -1.08
CFDP1-202ENST00000562602 ASIC1P78348 528 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 AMPD2Q01433 879 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 PDE4DQ08499 809 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 KIF5AQ12840 1032 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 TTLL12Q14166 644 aaPredicted RBP8.33□□□□□ -1.08
CFDP1-202ENST00000562602 INF2Q27J81 1249 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 NAALADL2Q58DX5 795 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 MUM1L1Q5H9M0 696 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 CCDC122Q5T0U0 273 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 UNC13DQ70J99 1090 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 SMYD4Q8IYR2 804 aaPredicted RBP8.33□□□□□ -1.08
CFDP1-202ENST00000562602 REXO1Q8N1G1 1221 aaKnown RBP8.33□□□□□ -1.08
CFDP1-202ENST00000562602 GUF1Q8N442 669 aaKnown RBP8.33□□□□□ -1.08
CFDP1-202ENST00000562602 KCTD17Q8N5Z5 321 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 TRIM58Q8NG06 486 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 FAM71BQ8TC56 605 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 RBM17Q96I25 401 aaKnown RBP8.33□□□□□ -1.08
CFDP1-202ENST00000562602 CCDC42Q96M95 316 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 ALS2CR12Q96Q35 445 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 EYA3Q99504 573 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 SLF1Q9BQI6 1058 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 NOC4LQ9BVI4 516 aaKnown RBP8.33□□□□□ -1.08
CFDP1-202ENST00000562602 TRIM9Q9C026 710 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 TFCP2L1Q9NZI6 479 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 SWAP70Q9UH65 585 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 L1RE1Q9UN81 338 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 PLIN4Q96Q06 1357 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 LAMB1P07942 1786 aa8.33□□□□□ -1.08
CFDP1-202ENST00000562602 COL5A3P25940 1745 aaPredicted RBP8.32□□□□□ -1.08
CFDP1-202ENST00000562602 NRAPQ86VF7 1730 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 KIAA1551Q9HCM1 1747 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 C10orf71Q711Q0 1435 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 PES1O00541 588 aaKnown RBP8.32□□□□□ -1.08
CFDP1-202ENST00000562602 CCNT1O60563 726 aaKnown RBP8.32□□□□□ -1.08
CFDP1-202ENST00000562602 CYP2D6P10635 497 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 IL1R1P14778 569 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 PLCG1P19174 1290 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 RFC4P35249 363 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 CDK8P49336 464 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 MAN2A1Q16706 1144 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 PTPN21Q16825 1174 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 TRAPPC3LQ5T215 181 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 KRT79Q5XKE5 535 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 PPP4R3AQ6IN85 833 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 CENPPQ6IPU0 288 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 TREML4Q6UXN2 200 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 LEKR1Q6ZMV7 388 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 BICDL1Q6ZP65 573 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 IRF2BP1Q8IU81 584 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 PARP9Q8IXQ6 854 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 TEX11Q8IYF3 940 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 RNF10Q8N5U6 811 aaKnown RBP8.32□□□□□ -1.08
CFDP1-202ENST00000562602 ACRBPQ8NEB7 543 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 GOLGA5Q8TBA6 731 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 SH3RF3Q8TEJ3 882 aaPredicted RBP8.32□□□□□ -1.08
CFDP1-202ENST00000562602 TGFBRAP1Q8WUH2 860 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 SYN2Q92777 582 aaPredicted RBP8.32□□□□□ -1.08
CFDP1-202ENST00000562602 GPKOWQ92917 476 aaPredicted RBP eCLIP8.32□□□□□ -1.08
CFDP1-202ENST00000562602 JAKMIP2Q96AA8 810 aa8.32□□□□□ -1.08
CFDP1-202ENST00000562602 NGLY1Q96IV0 654 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms