RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 DNAJC24Q6P3W2 148 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 KCTD6Q8NC69 237 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 SSH3Q8TE77 659 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 FTOQ9C0B1 505 aaKnown RBP eCLIP12.2□□□□□ -0.46
RPAP1-204ENST00000562303 USP44Q9H0E7 712 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 MOSPD1Q9UJG1 213 aa12.2□□□□□ -0.46
RPAP1-204ENST00000562303 F8W8V4 182 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 MEIS1O00470 390 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 HIP1RO75146 1068 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 ARMCX2Q7L311 632 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 ALKBH8Q96BT7 664 aaKnown RBP12.19□□□□□ -0.46
RPAP1-204ENST00000562303 PIGSQ96S52 555 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 PUS3Q9BZE2 481 aaKnown RBP12.19□□□□□ -0.46
RPAP1-204ENST00000562303 CUEDC2Q9H467 287 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 TLK1Q9UKI8 766 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 PCDHA7Q9UN72 937 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 ABCD1P33897 745 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 TRIM68Q6AZZ1 485 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 IL17REQ8NFR9 667 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 FAM81BQ96LP2 452 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 HEXIM2Q96MH2 286 aaKnown RBP12.19□□□□□ -0.46
RPAP1-204ENST00000562303 ASAP1Q9ULH1 1129 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 LRRN2O75325 713 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 CD58P19256 250 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 MX2P20592 715 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 TUBGCP2Q9BSJ2 902 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 ATP10AO60312 1499 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 BLMP54132 1417 aaPredicted RBP12.19□□□□□ -0.46
RPAP1-204ENST00000562303 MARK3P27448 753 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 PDIA3P30101 505 aaKnown RBP12.19□□□□□ -0.46
RPAP1-204ENST00000562303 FAM182BQ5T319 152 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 NUDCD1Q96RS6 583 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 CALN1Q9BXU9 219 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 SERPINB13Q9UIV8 391 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 KPNA2P52292 529 aaKnown RBP12.19□□□□□ -0.46
RPAP1-204ENST00000562303 ZNF445P59923 1031 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 RCN2Q14257 317 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 CIAPIN1Q6FI81 312 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 TTC30BQ8N4P2 665 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 ORC6Q9Y5N6 252 aa12.19□□□□□ -0.46
RPAP1-204ENST00000562303 EPN1Q9Y6I3 576 aaPredicted RBP12.19□□□□□ -0.46
RPAP1-204ENST00000562303 ATP10DQ9P241 1426 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 UGGT2Q9NYU1 1516 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 SRGAP2CP0DJJ0 459 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 GCFC2P16383 781 aaKnown RBP12.18□□□□□ -0.46
RPAP1-204ENST00000562303 IL6STP40189 918 aaPredicted RBP12.18□□□□□ -0.46
RPAP1-204ENST00000562303 NDUFA8P51970 172 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 GUCY2DQ02846 1103 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 PDXDC2PQ6P474 469 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 DHX36Q9H2U1 1008 aaKnown RBP12.18□□□□□ -0.46
RPAP1-204ENST00000562303 MRPL46Q9H2W6 279 aaKnown RBP12.18□□□□□ -0.46
RPAP1-204ENST00000562303 RPF1Q9H9Y2 349 aaKnown RBP12.18□□□□□ -0.46
RPAP1-204ENST00000562303 LMBRD1Q9NUN5 540 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 IL9RQ01113 521 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 PPP1R2P3Q6NXS1 205 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 TBCKQ8TEA7 893 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 FAM49AQ9H0Q0 323 aaPredicted RBP12.18□□□□□ -0.46
RPAP1-204ENST00000562303 SLC13A4Q9UKG4 626 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 PRPSAP2O60256 369 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 EVI5O60447 810 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 SGO2Q562F6 1265 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 SCARA5Q6ZMJ2 495 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 ZSWIM6Q9HCJ5 1215 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 PNMA3Q9UL41 463 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 NFKBIAP25963 317 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 MSH2P43246 934 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 BASP1P80723 227 aaKnown RBP12.18□□□□□ -0.46
RPAP1-204ENST00000562303 RNF219Q5W0B1 726 aaPredicted RBP12.18□□□□□ -0.46
RPAP1-204ENST00000562303 NDUFAF2Q8N183 169 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 HINFPQ9BQA5 517 aa12.18□□□□□ -0.46
RPAP1-204ENST00000562303 KIF24Q5T7B8 1368 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 PPP4R4Q6NUP7 873 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 COA7Q96BR5 231 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 AK8Q96MA6 479 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 SEC31BQ9NQW1 1179 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 EFCAB8A8MWE9 144 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 BRD1O95696 1058 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 PMLP29590 882 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 NFX1Q12986 1120 aaKnown RBP12.17□□□□□ -0.46
RPAP1-204ENST00000562303 ARL13BQ3SXY8 428 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 SPOPLQ6IQ16 392 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 NLRP4Q96MN2 994 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 TTC25Q96NG3 672 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 MTRQ99707 1265 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 TSPYL2Q9H2G4 693 aaPredicted RBP12.17□□□□□ -0.46
RPAP1-204ENST00000562303 MRPL47Q9HD33 250 aaKnown RBP12.17□□□□□ -0.46
RPAP1-204ENST00000562303 UBE2TQ9NPD8 197 aaPredicted RBP12.17□□□□□ -0.46
RPAP1-204ENST00000562303 SUCLA2Q9P2R7 463 aaPredicted RBP12.17□□□□□ -0.46
RPAP1-204ENST00000562303 PI4KBQ9UBF8 816 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 ITM2BQ9Y287 266 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 ZBTB1Q9Y2K1 713 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 CIAO1O76071 339 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 TRAPPC10P48553 1259 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 PRPF38AQ8NAV1 312 aaKnown RBP12.17□□□□□ -0.46
RPAP1-204ENST00000562303 NOP14P78316 857 aaKnown RBP12.17□□□□□ -0.46
RPAP1-204ENST00000562303 TRIM42Q8IWZ5 723 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 PPWD1Q96BP3 646 aaKnown RBP12.17□□□□□ -0.46
RPAP1-204ENST00000562303 CIITAP33076 1130 aa12.17□□□□□ -0.46
RPAP1-204ENST00000562303 DDIT3P35638 169 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms