RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 LRRC56Q8IYG6 542 aaPredicted RBP8.94□□□□□ -0.98
SMG1-204ENST00000561940 TMEM169Q96HH4 297 aa8.94□□□□□ -0.98
SMG1-204ENST00000561940 TOX2Q96NM4 488 aa8.94□□□□□ -0.98
SMG1-204ENST00000561940 SFMBT1Q9UHJ3 866 aa8.94□□□□□ -0.98
SMG1-204ENST00000561940 PCDHA5Q9Y5H7 936 aa8.94□□□□□ -0.98
SMG1-204ENST00000561940 IRAK3Q9Y616 596 aa8.94□□□□□ -0.98
SMG1-204ENST00000561940 NUAK1O60285 661 aa8.93□□□□□ -0.98
SMG1-204ENST00000561940 RFPL3O75679 317 aa8.93□□□□□ -0.98
SMG1-204ENST00000561940 JAG1P78504 1218 aa8.93□□□□□ -0.98
SMG1-204ENST00000561940 FGD2Q7Z6J4 655 aa8.93□□□□□ -0.98
SMG1-204ENST00000561940 ANKRD13AQ8IZ07 590 aa8.93□□□□□ -0.98
SMG1-204ENST00000561940 NETO2Q8NC67 525 aa8.93□□□□□ -0.98
SMG1-204ENST00000561940 ALG3Q92685 438 aa8.93□□□□□ -0.98
SMG1-204ENST00000561940 SIGLEC10Q96LC7 697 aa8.93□□□□□ -0.98
SMG1-204ENST00000561940 PHF20Q9BVI0 1012 aa8.93□□□□□ -0.98
SMG1-204ENST00000561940 TRIM39Q9HCM9 518 aa8.93□□□□□ -0.98
SMG1-204ENST00000561940 PCDH12Q9NPG4 1184 aa8.93□□□□□ -0.98
SMG1-204ENST00000561940 CLDND1Q9NY35 253 aa8.93□□□□□ -0.98
SMG1-204ENST00000561940 NUDT5Q9UKK9 219 aa8.93□□□□□ -0.98
SMG1-204ENST00000561940 TRAF6Q9Y4K3 522 aa8.93□□□□□ -0.98
SMG1-204ENST00000561940 ASXL2Q76L83 1435 aa8.93□□□□□ -0.98
SMG1-204ENST00000561940 MYCLP1P12525 358 aaPredicted RBP8.92□□□□□ -0.98
SMG1-204ENST00000561940 LSAMPQ13449 338 aa8.92□□□□□ -0.98
SMG1-204ENST00000561940 TRIM61Q5EBN2 209 aa8.92□□□□□ -0.98
SMG1-204ENST00000561940 TAF7LQ5H9L4 462 aa8.92□□□□□ -0.98
SMG1-204ENST00000561940 BRAPQ7Z569 592 aa8.92□□□□□ -0.98
SMG1-204ENST00000561940 THNSL2Q86YJ6 484 aa8.92□□□□□ -0.98
SMG1-204ENST00000561940 PEX11GQ96HA9 241 aa8.92□□□□□ -0.98
SMG1-204ENST00000561940 FAM126AQ9BYI3 521 aaPredicted RBP8.92□□□□□ -0.98
SMG1-204ENST00000561940 hCG_2014768A0A024R1R8 64 aa8.91□□□□□ -0.98
SMG1-204ENST00000561940 A0A087X0B3 334 aa8.91□□□□□ -0.98
SMG1-204ENST00000561940 DNAJC8O75937 253 aaPredicted RBP8.91□□□□□ -0.98
SMG1-204ENST00000561940 MC3RP41968 323 aa8.91□□□□□ -0.98
SMG1-204ENST00000561940 LIMS1P48059 325 aa8.91□□□□□ -0.98
SMG1-204ENST00000561940 GTF2A2P52657 109 aa8.91□□□□□ -0.98
SMG1-204ENST00000561940 AMPD3Q01432 767 aa8.91□□□□□ -0.98
SMG1-204ENST00000561940 CIAPIN1Q6FI81 312 aa8.91□□□□□ -0.98
SMG1-204ENST00000561940 TMEFF1Q8IYR6 380 aa8.91□□□□□ -0.98
SMG1-204ENST00000561940 GSTCDQ8NEC7 633 aa8.91□□□□□ -0.98
SMG1-204ENST00000561940 PPARGC1AQ9UBK2 798 aaKnown RBP8.91□□□□□ -0.98
SMG1-204ENST00000561940 NPFFR2Q9Y5X5 522 aa8.91□□□□□ -0.98
SMG1-204ENST00000561940 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.9□□□□□ -0.98
SMG1-204ENST00000561940 SGSM2O43147 1006 aa8.9□□□□□ -0.98
SMG1-204ENST00000561940 ATF2P15336 505 aa8.9□□□□□ -0.98
SMG1-204ENST00000561940 PMLP29590 882 aa8.9□□□□□ -0.98
SMG1-204ENST00000561940 GABREP78334 506 aa8.9□□□□□ -0.98
SMG1-204ENST00000561940 FZD5Q13467 585 aa8.9□□□□□ -0.98
SMG1-204ENST00000561940 TESK1Q15569 626 aa8.9□□□□□ -0.98
SMG1-204ENST00000561940 C1QL4Q86Z23 238 aa8.9□□□□□ -0.98
SMG1-204ENST00000561940 SCLYQ96I15 445 aa8.9□□□□□ -0.98
SMG1-204ENST00000561940 JAM3Q9BX67 310 aa8.9□□□□□ -0.98
SMG1-204ENST00000561940 EPB41L4AQ9HCS5 686 aaPredicted RBP8.9□□□□□ -0.98
SMG1-204ENST00000561940 IRS2Q9Y4H2 1338 aa8.89□□□□□ -0.99
SMG1-204ENST00000561940 FAM83GA6ND36 823 aa8.89□□□□□ -0.99
SMG1-204ENST00000561940 PDE8AO60658 829 aa8.89□□□□□ -0.99
SMG1-204ENST00000561940 RASGRP1O95267 797 aa8.89□□□□□ -0.99
SMG1-204ENST00000561940 ASGR2P07307 311 aa8.89□□□□□ -0.99
SMG1-204ENST00000561940 VIL1P09327 827 aaKnown RBP8.89□□□□□ -0.99
SMG1-204ENST00000561940 ZNF460Q14592 562 aa8.89□□□□□ -0.99
SMG1-204ENST00000561940 ZSCAN18Q8TBC5 510 aaPredicted RBP8.89□□□□□ -0.99
SMG1-204ENST00000561940 PTPRN2Q92932 1015 aa8.89□□□□□ -0.99
SMG1-204ENST00000561940 TSPAN17Q96FV3 270 aa8.89□□□□□ -0.99
SMG1-204ENST00000561940 TARS2Q9BW92 718 aaKnown RBP8.89□□□□□ -0.99
SMG1-204ENST00000561940 COA3Q9Y2R0 106 aaPredicted RBP8.89□□□□□ -0.99
SMG1-204ENST00000561940 NOP58Q9Y2X3 529 aaKnown RBP8.89□□□□□ -0.99
SMG1-204ENST00000561940 X6R8D5 127 aa8.89□□□□□ -0.99
SMG1-204ENST00000561940 KCNQ2O43526 872 aa8.88□□□□□ -0.99
SMG1-204ENST00000561940 PFKLP17858 780 aa8.88□□□□□ -0.99
SMG1-204ENST00000561940 FBLN1P23142 703 aa8.88□□□□□ -0.99
SMG1-204ENST00000561940 VMACQ2NL98 169 aa8.88□□□□□ -0.99
SMG1-204ENST00000561940 ZNF385BQ569K4 471 aa8.88□□□□□ -0.99
SMG1-204ENST00000561940 MROH9Q5TGP6 573 aa8.88□□□□□ -0.99
SMG1-204ENST00000561940 CNNM4Q6P4Q7 775 aa8.88□□□□□ -0.99
SMG1-204ENST00000561940 CNKSR3Q6P9H4 555 aa8.88□□□□□ -0.99
SMG1-204ENST00000561940 MILR1Q7Z6M3 343 aa8.88□□□□□ -0.99
SMG1-204ENST00000561940 LRRTM3Q86VH5 581 aa8.88□□□□□ -0.99
SMG1-204ENST00000561940 DCP2Q8IU60 420 aaKnown RBP8.88□□□□□ -0.99
SMG1-204ENST00000561940 UBR7Q8N806 425 aa8.88□□□□□ -0.99
SMG1-204ENST00000561940 ZCRB1Q8TBF4 217 aaKnown RBP8.88□□□□□ -0.99
SMG1-204ENST00000561940 DCAF4Q8WV16 495 aa8.88□□□□□ -0.99
SMG1-204ENST00000561940 AP5M1Q9H0R1 490 aa8.88□□□□□ -0.99
SMG1-204ENST00000561940 GPR27Q9NS67 375 aa8.88□□□□□ -0.99
SMG1-204ENST00000561940 PALD1Q9ULE6 856 aa8.88□□□□□ -0.99
SMG1-204ENST00000561940 TNPO3Q9Y5L0 923 aaKnown RBP8.88□□□□□ -0.99
SMG1-204ENST00000561940 GSG1L2A8MUP6 293 aa8.87□□□□□ -0.99
SMG1-204ENST00000561940 ZBTB7AO95365 584 aa8.87□□□□□ -0.99
SMG1-204ENST00000561940 HMGB1P09429 215 aaKnown RBP8.87□□□□□ -0.99
SMG1-204ENST00000561940 ZSCAN22P10073 491 aaPredicted RBP8.87□□□□□ -0.99
SMG1-204ENST00000561940 NCAM1P13591 858 aa8.87□□□□□ -0.99
SMG1-204ENST00000561940 IBSPP21815 317 aaPredicted RBP8.87□□□□□ -0.99
SMG1-204ENST00000561940 STAT3P40763 770 aa8.87□□□□□ -0.99
SMG1-204ENST00000561940 IGBP1P78318 339 aa8.87□□□□□ -0.99
SMG1-204ENST00000561940 TARBP2Q15633 366 aaKnown RBP8.87□□□□□ -0.99
SMG1-204ENST00000561940 STYK1Q6J9G0 422 aa8.87□□□□□ -0.99
SMG1-204ENST00000561940 KRT26Q7Z3Y9 468 aa8.87□□□□□ -0.99
SMG1-204ENST00000561940 FAM129CQ86XR2 697 aa8.87□□□□□ -0.99
SMG1-204ENST00000561940 RPUSD2Q8IZ73 545 aaKnown RBP8.87□□□□□ -0.99
SMG1-204ENST00000561940 FAN1Q9Y2M0 1017 aa8.87□□□□□ -0.99
SMG1-204ENST00000561940 H7BY64 318 aa8.86□□□□□ -0.99
SMG1-204ENST00000561940 RFXAPO00287 272 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms