RNA–Protein interactions for RNA: ENST00000561930.1

PDXDC1-206, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-206ENST00000561930 VWA3BQ502W6 1294 aa7.23□□□□□ -1.25
PDXDC1-206ENST00000561930 ARHGEF39Q8N4T4 335 aa7.23□□□□□ -1.25
PDXDC1-206ENST00000561930 SMARCC2Q8TAQ2 1214 aa7.23□□□□□ -1.25
PDXDC1-206ENST00000561930 RCC1LQ96I51 464 aaKnown RBP7.23□□□□□ -1.25
PDXDC1-206ENST00000561930 APBA2Q99767 749 aa7.23□□□□□ -1.25
PDXDC1-206ENST00000561930 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.23□□□□□ -1.25
PDXDC1-206ENST00000561930 A2ML1A8K2U0 1454 aa7.23□□□□□ -1.25
PDXDC1-206ENST00000561930 NUP153P49790 1475 aaKnown RBP7.23□□□□□ -1.25
PDXDC1-206ENST00000561930 XIRP1Q702N8 1843 aaKnown RBP7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 ROBO1Q9Y6N7 1651 aa7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 ANKRD34BA5PLL1 514 aa7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 K7ESM1 405 aa7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 KCNH1O95259 989 aa7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 NASPP49321 788 aaPredicted RBP7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 WWC2Q6AWC2 1192 aa7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 POMZP3Q6PJE2 187 aa7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 VHLLQ6RSH7 139 aa7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 FERMT3Q86UX7 667 aa7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 FAM9AQ8IZU1 332 aaPredicted RBP7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 CARFQ8N187 725 aa7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 DDX1Q92499 740 aaKnown RBP7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 ZBTB8AQ96BR9 441 aa7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 NTMQ9P121 344 aa7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 DEPDC5O75140 1603 aa7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 ITSN2Q9NZM3 1697 aa7.22□□□□□ -1.25
PDXDC1-206ENST00000561930 SH3D21A4FU49 640 aa7.21□□□□□ -1.26
PDXDC1-206ENST00000561930 PRICKLE3O43900 615 aaPredicted RBP7.21□□□□□ -1.26
PDXDC1-206ENST00000561930 SARSP49591 514 aaKnown RBP7.21□□□□□ -1.26
PDXDC1-206ENST00000561930 CACNB2Q08289 660 aaPredicted RBP7.21□□□□□ -1.26
PDXDC1-206ENST00000561930 DDX11Q96FC9 970 aa7.21□□□□□ -1.26
PDXDC1-206ENST00000561930 AP5M1Q9H0R1 490 aa7.21□□□□□ -1.26
PDXDC1-206ENST00000561930 BTG4Q9NY30 223 aa7.21□□□□□ -1.26
PDXDC1-206ENST00000561930 CLEC1BQ9P126 229 aa7.21□□□□□ -1.26
PDXDC1-206ENST00000561930 ZMYM3Q14202 1370 aa7.2□□□□□ -1.26
PDXDC1-206ENST00000561930 NTRK1P04629 796 aa7.2□□□□□ -1.26
PDXDC1-206ENST00000561930 HTRA3P83110 453 aa7.2□□□□□ -1.26
PDXDC1-206ENST00000561930 ZFYVE27Q5T4F4 411 aa7.2□□□□□ -1.26
PDXDC1-206ENST00000561930 DCP2Q8IU60 420 aaKnown RBP7.2□□□□□ -1.26
PDXDC1-206ENST00000561930 RASGRP4Q8TDF6 673 aa7.2□□□□□ -1.26
PDXDC1-206ENST00000561930 GPR20Q99678 358 aa7.2□□□□□ -1.26
PDXDC1-206ENST00000561930 KRTAP4-5Q9BYR2 181 aa7.2□□□□□ -1.26
PDXDC1-206ENST00000561930 MARCH2Q9P0N8 246 aa7.2□□□□□ -1.26
PDXDC1-206ENST00000561930 JAG2Q9Y219 1238 aa7.2□□□□□ -1.26
PDXDC1-206ENST00000561930 PHLPP1O60346 1717 aa7.2□□□□□ -1.26
PDXDC1-206ENST00000561930 PLCH2O75038 1416 aa7.19□□□□□ -1.26
PDXDC1-206ENST00000561930 FAM135BQ49AJ0 1406 aa7.19□□□□□ -1.26
PDXDC1-206ENST00000561930 MLH3Q9UHC1 1453 aa7.19□□□□□ -1.26
PDXDC1-206ENST00000561930 C7orf72A4D263 438 aa7.19□□□□□ -1.26
PDXDC1-206ENST00000561930 RECKO95980 971 aa7.19□□□□□ -1.26
PDXDC1-206ENST00000561930 CYP2C8P10632 490 aa7.19□□□□□ -1.26
PDXDC1-206ENST00000561930 CNR2P34972 360 aa7.19□□□□□ -1.26
PDXDC1-206ENST00000561930 SCRN1Q12765 414 aa7.19□□□□□ -1.26
PDXDC1-206ENST00000561930 SMAD4Q13485 552 aaKnown RBP7.19□□□□□ -1.26
PDXDC1-206ENST00000561930 ZNF827Q17R98 1081 aa7.19□□□□□ -1.26
PDXDC1-206ENST00000561930 NT5DC4Q86YG4 428 aa7.19□□□□□ -1.26
PDXDC1-206ENST00000561930 CPA5Q8WXQ8 436 aa7.19□□□□□ -1.26
PDXDC1-206ENST00000561930 KLHL6Q8WZ60 621 aa7.19□□□□□ -1.26
PDXDC1-206ENST00000561930 MTA3Q9BTC8 594 aa7.19□□□□□ -1.26
PDXDC1-206ENST00000561930 SAMD9Q5K651 1589 aa7.19□□□□□ -1.26
PDXDC1-206ENST00000561930 NPHP4O75161 1426 aaPredicted RBP7.18□□□□□ -1.26
PDXDC1-206ENST00000561930 MED14O60244 1454 aa7.18□□□□□ -1.26
PDXDC1-206ENST00000561930 PPP1R11O60927 126 aaPredicted RBP7.18□□□□□ -1.26
PDXDC1-206ENST00000561930 PLS3P13797 630 aa7.18□□□□□ -1.26
PDXDC1-206ENST00000561930 VAMP1P23763 118 aa7.18□□□□□ -1.26
PDXDC1-206ENST00000561930 ZXDCQ2QGD7 858 aaPredicted RBP7.18□□□□□ -1.26
PDXDC1-206ENST00000561930 C9orf131Q5VYM1 1079 aa7.18□□□□□ -1.26
PDXDC1-206ENST00000561930 ZNF772Q68DY9 489 aaPredicted RBP7.18□□□□□ -1.26
PDXDC1-206ENST00000561930 BVESQ8NE79 360 aa7.18□□□□□ -1.26
PDXDC1-206ENST00000561930 ANAPC16Q96DE5 110 aa7.18□□□□□ -1.26
PDXDC1-206ENST00000561930 PCDH18Q9HCL0 1135 aa7.18□□□□□ -1.26
PDXDC1-206ENST00000561930 GPRC5CQ9NQ84 441 aa7.18□□□□□ -1.26
PDXDC1-206ENST00000561930 FBLN5Q9UBX5 448 aa7.18□□□□□ -1.26
PDXDC1-206ENST00000561930 SIT1Q9Y3P8 196 aa7.18□□□□□ -1.26
PDXDC1-206ENST00000561930 LRP6O75581 1613 aa7.18□□□□□ -1.26
PDXDC1-206ENST00000561930 KIDINS220Q9ULH0 1771 aa7.18□□□□□ -1.26
PDXDC1-206ENST00000561930 EP400Q96L91 3159 aa7.17□□□□□ -1.26
PDXDC1-206ENST00000561930 CASP7P55210 303 aa7.17□□□□□ -1.26
PDXDC1-206ENST00000561930 CD300LDQ6UXZ3 194 aa7.17□□□□□ -1.26
PDXDC1-206ENST00000561930 ETV3LQ6ZN32 361 aa7.17□□□□□ -1.26
PDXDC1-206ENST00000561930 ZC3H18Q86VM9 953 aaKnown RBP7.17□□□□□ -1.26
PDXDC1-206ENST00000561930 NOX5Q96PH1 765 aa7.17□□□□□ -1.26
PDXDC1-206ENST00000561930 INPP5FQ9Y2H2 1132 aa7.17□□□□□ -1.26
PDXDC1-206ENST00000561930 RGS12O14924 1447 aa7.17□□□□□ -1.26
PDXDC1-206ENST00000561930 ABCC1P33527 1531 aa7.17□□□□□ -1.26
PDXDC1-206ENST00000561930 ZC3H13Q5T200 1668 aaKnown RBP7.16□□□□□ -1.26
PDXDC1-206ENST00000561930 PLEKHD1A6NEE1 506 aa7.16□□□□□ -1.26
PDXDC1-206ENST00000561930 GGNQ86UU5 652 aa7.16□□□□□ -1.26
PDXDC1-206ENST00000561930 FAM124AQ86V42 546 aa7.16□□□□□ -1.26
PDXDC1-206ENST00000561930 METTL16Q86W50 562 aaKnown RBP7.16□□□□□ -1.26
PDXDC1-206ENST00000561930 SHDQ96IW2 340 aa7.16□□□□□ -1.26
PDXDC1-206ENST00000561930 SEC16BQ96JE7 1060 aa7.16□□□□□ -1.26
PDXDC1-206ENST00000561930 MMP19Q99542 508 aa7.16□□□□□ -1.26
PDXDC1-206ENST00000561930 YIPF4Q9BSR8 244 aa7.16□□□□□ -1.26
PDXDC1-206ENST00000561930 LRP2BPQ9P2M1 347 aa7.16□□□□□ -1.26
PDXDC1-206ENST00000561930 CNOT11Q9UKZ1 510 aaKnown RBP7.16□□□□□ -1.26
PDXDC1-206ENST00000561930 EMC9Q9Y3B6 208 aa7.16□□□□□ -1.26
PDXDC1-206ENST00000561930 JCADQ9P266 1359 aa7.16□□□□□ -1.26
PDXDC1-206ENST00000561930 C22orf46C9J442 243 aa7.15□□□□□ -1.26
PDXDC1-206ENST00000561930 NOBOXO60393 691 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms