RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TBC1D32Q96NH3 1257 aa15.93■□□□□ 0.14
TPM1-230ENST00000561266 STARD7Q9NQZ5 370 aa15.93■□□□□ 0.14
TPM1-230ENST00000561266 TRIP12Q14669 1992 aaPredicted RBP15.93■□□□□ 0.14
TPM1-230ENST00000561266 TRIM43BA6NCK2 446 aa15.92■□□□□ 0.14
TPM1-230ENST00000561266 SPDYE3A6NKU9 549 aa15.92■□□□□ 0.14
TPM1-230ENST00000561266 DEXIO95424 95 aa15.92■□□□□ 0.14
TPM1-230ENST00000561266 GGPS1O95749 300 aa15.92■□□□□ 0.14
TPM1-230ENST00000561266 MMP3P08254 477 aa15.92■□□□□ 0.14
TPM1-230ENST00000561266 ITGB8P26012 769 aa15.92■□□□□ 0.14
TPM1-230ENST00000561266 HSDL1Q3SXM5 330 aa15.92■□□□□ 0.14
TPM1-230ENST00000561266 CELF3Q5SZQ8 465 aaKnown RBP15.92■□□□□ 0.14
TPM1-230ENST00000561266 SLC43A3Q8NBI5 491 aa15.92■□□□□ 0.14
TPM1-230ENST00000561266 TRIM43Q96BQ3 446 aaPredicted RBP15.92■□□□□ 0.14
TPM1-230ENST00000561266 RBM27Q9P2N5 1060 aaKnown RBP15.92■□□□□ 0.14
TPM1-230ENST00000561266 KCNJ14Q9UNX9 436 aa15.92■□□□□ 0.14
TPM1-230ENST00000561266 ELP1O95163 1332 aa15.92■□□□□ 0.14
TPM1-230ENST00000561266 M0R2N6 131 aa15.91■□□□□ 0.14
TPM1-230ENST00000561266 SREBF1P36956 1147 aa15.91■□□□□ 0.14
TPM1-230ENST00000561266 FAAP100Q0VG06 881 aa15.91■□□□□ 0.14
TPM1-230ENST00000561266 TRIM22Q8IYM9 498 aa15.91■□□□□ 0.14
TPM1-230ENST00000561266 KAT2BQ92831 832 aa15.91■□□□□ 0.14
TPM1-230ENST00000561266 EMID1Q96A84 441 aaPredicted RBP15.91■□□□□ 0.14
TPM1-230ENST00000561266 VTI1AQ96AJ9 217 aa15.91■□□□□ 0.14
TPM1-230ENST00000561266 GLT1D1Q96MS3 346 aa15.91■□□□□ 0.14
TPM1-230ENST00000561266 UIMC1Q96RL1 719 aa15.91■□□□□ 0.14
TPM1-230ENST00000561266 PDLIM7Q9NR12 457 aa15.91■□□□□ 0.14
TPM1-230ENST00000561266 LIMCH1Q9UPQ0 1083 aa15.91■□□□□ 0.14
TPM1-230ENST00000561266 NR2E3Q9Y5X4 410 aa15.91■□□□□ 0.14
TPM1-230ENST00000561266 RANBP2P49792 3224 aaKnown RBP15.9■□□□□ 0.14
TPM1-230ENST00000561266 ARVCFO00192 962 aa15.9■□□□□ 0.14
TPM1-230ENST00000561266 PQBP1O60828 265 aaKnown RBP15.9■□□□□ 0.14
TPM1-230ENST00000561266 ARP10275 920 aa15.9■□□□□ 0.14
TPM1-230ENST00000561266 KCNA2P16389 499 aa15.9■□□□□ 0.14
TPM1-230ENST00000561266 ARHGAP4P98171 946 aa15.9■□□□□ 0.14
TPM1-230ENST00000561266 ITGA7Q13683 1181 aa15.9■□□□□ 0.14
TPM1-230ENST00000561266 XRRA1Q6P2D8 792 aa15.9■□□□□ 0.14
TPM1-230ENST00000561266 CYFIP1Q7L576 1253 aa15.9■□□□□ 0.14
TPM1-230ENST00000561266 CCDC83Q8IWF9 413 aa15.9■□□□□ 0.14
TPM1-230ENST00000561266 DHX37Q8IY37 1157 aaKnown RBP15.9■□□□□ 0.14
TPM1-230ENST00000561266 PRO3102Q9H379 93 aa15.9■□□□□ 0.14
TPM1-230ENST00000561266 C6orf50Q9HD87 102 aa15.9■□□□□ 0.14
TPM1-230ENST00000561266 JADE2Q9NQC1 790 aa15.9■□□□□ 0.14
TPM1-230ENST00000561266 SH3GLB2Q9NR46 395 aa15.9■□□□□ 0.14
TPM1-230ENST00000561266 PKD2L1Q9P0L9 805 aa15.9■□□□□ 0.14
TPM1-230ENST00000561266 ORC3Q9UBD5 711 aaPredicted RBP15.9■□□□□ 0.14
TPM1-230ENST00000561266 STK36Q9NRP7 1315 aa15.9■□□□□ 0.14
TPM1-230ENST00000561266 A0A0U1RQG5 324 aaPredicted RBP15.89■□□□□ 0.13
TPM1-230ENST00000561266 FAM86B1E9PN63 330 aa15.89■□□□□ 0.13
TPM1-230ENST00000561266 FIBPO43427 364 aa15.89■□□□□ 0.13
TPM1-230ENST00000561266 STAM2O75886 525 aa15.89■□□□□ 0.13
TPM1-230ENST00000561266 FOSP01100 380 aaPredicted RBP15.89■□□□□ 0.13
TPM1-230ENST00000561266 FAM86B2P0C5J1 330 aa15.89■□□□□ 0.13
TPM1-230ENST00000561266 TGFB3P10600 412 aa15.89■□□□□ 0.13
TPM1-230ENST00000561266 HOXD8P13378 290 aaPredicted RBP15.89■□□□□ 0.13
TPM1-230ENST00000561266 CPT1AP50416 773 aa15.89■□□□□ 0.13
TPM1-230ENST00000561266 NLRP5P59047 1200 aa15.89■□□□□ 0.13
TPM1-230ENST00000561266 AP3B2Q13367 1082 aa15.89■□□□□ 0.13
TPM1-230ENST00000561266 NBPF20Q3BBV1 942 aa15.89■□□□□ 0.13
TPM1-230ENST00000561266 CPLX2Q6PUV4 134 aaKnown RBP15.89■□□□□ 0.13
TPM1-230ENST00000561266 ANKRD33Q7Z3H0 272 aa15.89■□□□□ 0.13
TPM1-230ENST00000561266 FAM126BQ8IXS8 530 aa15.89■□□□□ 0.13
TPM1-230ENST00000561266 REXO1Q8N1G1 1221 aaKnown RBP15.89■□□□□ 0.13
TPM1-230ENST00000561266 OXER1Q8TDS5 423 aa15.89■□□□□ 0.13
TPM1-230ENST00000561266 MXRA8Q9BRK3 442 aa15.89■□□□□ 0.13
TPM1-230ENST00000561266 PHF20Q9BVI0 1012 aa15.89■□□□□ 0.13
TPM1-230ENST00000561266 COLQQ9Y215 455 aaPredicted RBP15.89■□□□□ 0.13
TPM1-230ENST00000561266 IGLV3-22A0A075B6J6 115 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 ZEB2O60315 1214 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 CD4P01730 458 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 ZNF286BP0CG31 522 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 FOSBP53539 338 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 LAMC2Q13753 1193 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 HIC1Q14526 733 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 RABEP1Q15276 862 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 GNPTABQ3T906 1256 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 EARS2Q5JPH6 523 aaKnown RBP15.88■□□□□ 0.13
TPM1-230ENST00000561266 KCNV1Q6PIU1 500 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 CHRDL2Q6WN34 429 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 CCDC148Q8NFR7 591 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 PPTC7Q8NI37 304 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 CCDC12Q8WUD4 166 aaPredicted RBP15.88■□□□□ 0.13
TPM1-230ENST00000561266 GPRASP2Q96D09 838 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 SPATA33Q96N06 139 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 MTG1Q9BT17 334 aaPredicted RBP15.88■□□□□ 0.13
TPM1-230ENST00000561266 TRPV6Q9H1D0 765 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 POLR3EQ9NVU0 708 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 PCDHA4Q9UN74 947 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 WDR81Q562E7 1941 aa15.88■□□□□ 0.13
TPM1-230ENST00000561266 MEIS1O00470 390 aa15.87■□□□□ 0.13
TPM1-230ENST00000561266 B4GALT4O60513 344 aa15.87■□□□□ 0.13
TPM1-230ENST00000561266 CABYRO75952 493 aa15.87■□□□□ 0.13
TPM1-230ENST00000561266 CDKL5O76039 1030 aa15.87■□□□□ 0.13
TPM1-230ENST00000561266 CYP3A4P08684 503 aa15.87■□□□□ 0.13
TPM1-230ENST00000561266 GNA11P29992 359 aa15.87■□□□□ 0.13
TPM1-230ENST00000561266 MAGEA10P43363 369 aaPredicted RBP15.87■□□□□ 0.13
TPM1-230ENST00000561266 MDM2Q00987 491 aaPredicted RBP15.87■□□□□ 0.13
TPM1-230ENST00000561266 ITGB3BPQ13352 177 aaPredicted RBP15.87■□□□□ 0.13
TPM1-230ENST00000561266 MTMR1Q13613 665 aa15.87■□□□□ 0.13
TPM1-230ENST00000561266 NLRX1Q86UT6 975 aa15.87■□□□□ 0.13
TPM1-230ENST00000561266 BLIDQ8IZY5 108 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms