RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 CD247P20963 164 aa7.73□□□□□ -1.17
LRRC28-220ENST00000561253 TNK2Q07912 1038 aa7.73□□□□□ -1.17
LRRC28-220ENST00000561253 SLC39A6Q13433 755 aa7.73□□□□□ -1.17
LRRC28-220ENST00000561253 SV2CQ496J9 727 aa7.73□□□□□ -1.17
LRRC28-220ENST00000561253 NOL9Q5SY16 702 aaKnown RBP7.73□□□□□ -1.17
LRRC28-220ENST00000561253 PIWIL2Q8TC59 973 aaKnown RBP7.73□□□□□ -1.17
LRRC28-220ENST00000561253 FGD4Q96M96 766 aa7.73□□□□□ -1.17
LRRC28-220ENST00000561253 PRDM14Q9GZV8 571 aa7.73□□□□□ -1.17
LRRC28-220ENST00000561253 KLHL25Q9H0H3 589 aa7.73□□□□□ -1.17
LRRC28-220ENST00000561253 EPN3Q9H201 632 aa7.73□□□□□ -1.17
LRRC28-220ENST00000561253 SEMA6BQ9H3T3 888 aa7.73□□□□□ -1.17
LRRC28-220ENST00000561253 MKNK2Q9HBH9 465 aa7.73□□□□□ -1.17
LRRC28-220ENST00000561253 CICQ96RK0 1608 aaPredicted RBP7.73□□□□□ -1.17
LRRC28-220ENST00000561253 RREB1Q92766 1687 aa7.73□□□□□ -1.17
LRRC28-220ENST00000561253 LY75O60449 1722 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 KAT6BQ8WYB5 2073 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 UBR2Q8IWV8 1755 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 PPM1BO75688 479 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 CEACAM5P06731 702 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 ITGA4P13612 1032 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 ITPK1Q13572 414 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 EZH2Q15910 746 aaKnown RBP7.72□□□□□ -1.17
LRRC28-220ENST00000561253 TXNRD1Q16881 649 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 PRSS36Q5K4E3 855 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 CDKAL1Q5VV42 579 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 ZNF790Q6PG37 636 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 PPP1R14AQ96A00 147 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 SYTL4Q96C24 671 aaPredicted RBP7.72□□□□□ -1.17
LRRC28-220ENST00000561253 GP6Q9HCN6 339 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 WHRNQ9P202 907 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 SUGT1Q9Y2Z0 365 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 ZNF451Q9Y4E5 1061 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 ZNF831Q5JPB2 1677 aa7.72□□□□□ -1.17
LRRC28-220ENST00000561253 RBAK-RBAKDNI3L0D1 243 aa7.71□□□□□ -1.18
LRRC28-220ENST00000561253 AGRPO00253 132 aa7.71□□□□□ -1.18
LRRC28-220ENST00000561253 SHOXO15266 292 aa7.71□□□□□ -1.18
LRRC28-220ENST00000561253 FOSL1P15407 271 aa7.71□□□□□ -1.18
LRRC28-220ENST00000561253 LMOD3Q0VAK6 560 aa7.71□□□□□ -1.18
LRRC28-220ENST00000561253 TEFQ10587 303 aa7.71□□□□□ -1.18
LRRC28-220ENST00000561253 NMIQ13287 307 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-220ENST00000561253 SNW1Q13573 536 aaKnown RBP7.71□□□□□ -1.18
LRRC28-220ENST00000561253 TAF7Q15545 349 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-220ENST00000561253 CLEC16AQ2KHT3 1053 aa7.71□□□□□ -1.18
LRRC28-220ENST00000561253 AMIGO3Q86WK7 504 aa7.71□□□□□ -1.18
LRRC28-220ENST00000561253 NGEFQ8N5V2 710 aa7.71□□□□□ -1.18
LRRC28-220ENST00000561253 NETO1Q8TDF5 533 aa7.71□□□□□ -1.18
LRRC28-220ENST00000561253 RTF1Q92541 710 aaKnown RBP7.71□□□□□ -1.18
LRRC28-220ENST00000561253 ZNF496Q96IT1 587 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-220ENST00000561253 DNAJC7Q99615 494 aa7.71□□□□□ -1.18
LRRC28-220ENST00000561253 BABAM1Q9NWV8 329 aa7.71□□□□□ -1.18
LRRC28-220ENST00000561253 GFOD1Q9NXC2 390 aa7.71□□□□□ -1.18
LRRC28-220ENST00000561253 LRP2BPQ9P2M1 347 aa7.71□□□□□ -1.18
LRRC28-220ENST00000561253 SUSD2Q9UGT4 822 aa7.71□□□□□ -1.18
LRRC28-220ENST00000561253 U3KQE9 123 aa7.71□□□□□ -1.18
LRRC28-220ENST00000561253 VIRMAQ69YN4 1812 aaKnown RBP7.71□□□□□ -1.18
LRRC28-220ENST00000561253 GOLGB1Q14789 3259 aaKnown RBP7.7□□□□□ -1.18
LRRC28-220ENST00000561253 NUP188Q5SRE5 1749 aa7.7□□□□□ -1.18
LRRC28-220ENST00000561253 PRR19A6NJB7 356 aa7.7□□□□□ -1.18
LRRC28-220ENST00000561253 NKPD1Q17RQ9 610 aa7.7□□□□□ -1.18
LRRC28-220ENST00000561253 SLC10A6Q3KNW5 377 aa7.7□□□□□ -1.18
LRRC28-220ENST00000561253 TMC3Q7Z5M5 1100 aa7.7□□□□□ -1.18
LRRC28-220ENST00000561253 SPACA3Q8IXA5 215 aa7.7□□□□□ -1.18
LRRC28-220ENST00000561253 DSCC1Q9BVC3 393 aa7.7□□□□□ -1.18
LRRC28-220ENST00000561253 TRIT1Q9H3H1 467 aaKnown RBP7.7□□□□□ -1.18
LRRC28-220ENST00000561253 MIS18AQ9NYP9 233 aa7.7□□□□□ -1.18
LRRC28-220ENST00000561253 PRR13Q9NZ81 148 aa7.7□□□□□ -1.18
LRRC28-220ENST00000561253 PFDN2Q9UHV9 154 aa7.7□□□□□ -1.18
LRRC28-220ENST00000561253 IL16Q14005 1332 aa7.7□□□□□ -1.18
LRRC28-220ENST00000561253 KDM3BQ7LBC6 1761 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 IQCA1LA6NCM1 817 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 BTBD11A6QL63 1104 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 NOP56O00567 594 aaKnown RBP7.69□□□□□ -1.18
LRRC28-220ENST00000561253 TGFB1P01137 390 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 CLCN7P51798 805 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 ZNF445P59923 1031 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 EIF4A1P60842 406 aaKnown RBP7.69□□□□□ -1.18
LRRC28-220ENST00000561253 SSRP1Q08945 709 aaKnown RBP7.69□□□□□ -1.18
LRRC28-220ENST00000561253 IFI16Q16666 785 aaKnown RBP7.69□□□□□ -1.18
LRRC28-220ENST00000561253 ZNF827Q17R98 1081 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 GIMAP6Q6P9H5 292 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 SPATC1Q76KD6 591 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 WDR63Q8IWG1 891 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 TRMT2AQ8IZ69 625 aaKnown RBP7.69□□□□□ -1.18
LRRC28-220ENST00000561253 PLD6Q8N2A8 252 aaKnown RBP7.69□□□□□ -1.18
LRRC28-220ENST00000561253 LINC00116Q8NCU8 138 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 ADCY4Q8NFM4 1077 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 BRF1Q92994 677 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 ZNF669Q96BR6 464 aaPredicted RBP7.69□□□□□ -1.18
LRRC28-220ENST00000561253 GPR62Q9BZJ7 368 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 CWC22Q9HCG8 908 aaKnown RBP7.69□□□□□ -1.18
LRRC28-220ENST00000561253 CHST7Q9NS84 486 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 GPATCH2Q9NW75 528 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 IFT57Q9NWB7 429 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 ZC3H7BQ9UGR2 993 aaKnown RBP7.69□□□□□ -1.18
LRRC28-220ENST00000561253 TMA7Q9Y2S6 64 aaKnown RBP7.69□□□□□ -1.18
LRRC28-220ENST00000561253 FHOD1Q9Y613 1164 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 C5P01031 1676 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 TJP1Q07157 1748 aa7.69□□□□□ -1.18
LRRC28-220ENST00000561253 UTRNP46939 3433 aa7.68□□□□□ -1.18
LRRC28-220ENST00000561253 A0A087WZG4 1122 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms