RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 GDPD2Q9HCC8 539 aa10.67□□□□□ -0.7
HERC1-206ENST00000559996 TSKSQ9UJT2 592 aa10.67□□□□□ -0.7
HERC1-206ENST00000559996 PLXNA1Q9UIW2 1896 aa10.67□□□□□ -0.7
HERC1-206ENST00000559996 CEP350Q5VT06 3117 aa10.67□□□□□ -0.7
HERC1-206ENST00000559996 LOC102724159A0A0B4J2E5 919 aa10.66□□□□□ -0.7
HERC1-206ENST00000559996 DHX15O43143 795 aaKnown RBP10.66□□□□□ -0.7
HERC1-206ENST00000559996 CCNT1O60563 726 aaKnown RBP10.66□□□□□ -0.7
HERC1-206ENST00000559996 ARP10275 920 aa10.66□□□□□ -0.7
HERC1-206ENST00000559996 MCM7P33993 719 aa10.66□□□□□ -0.7
HERC1-206ENST00000559996 ATP2C1P98194 919 aaPredicted RBP10.66□□□□□ -0.7
HERC1-206ENST00000559996 CEBPZQ03701 1054 aaKnown RBP10.66□□□□□ -0.7
HERC1-206ENST00000559996 MMRN1Q13201 1228 aa10.66□□□□□ -0.7
HERC1-206ENST00000559996 PTGDRQ13258 359 aa10.66□□□□□ -0.7
HERC1-206ENST00000559996 PWP2Q15269 919 aaKnown RBP10.66□□□□□ -0.7
HERC1-206ENST00000559996 CCL14Q16627 93 aa10.66□□□□□ -0.7
HERC1-206ENST00000559996 CEP55Q53EZ4 464 aa10.66□□□□□ -0.7
HERC1-206ENST00000559996 AXDND1Q5T1B0 1012 aaPredicted RBP10.66□□□□□ -0.7
HERC1-206ENST00000559996 ETNPPLQ8TBG4 499 aa10.66□□□□□ -0.7
HERC1-206ENST00000559996 CD99L2Q8TCZ2 262 aa10.66□□□□□ -0.7
HERC1-206ENST00000559996 LEO1Q8WVC0 666 aaPredicted RBP10.66□□□□□ -0.7
HERC1-206ENST00000559996 GJA10Q969M2 543 aa10.66□□□□□ -0.7
HERC1-206ENST00000559996 INPP4AQ96PE3 977 aaPredicted RBP10.66□□□□□ -0.7
HERC1-206ENST00000559996 HS3ST6Q96QI5 342 aa10.66□□□□□ -0.7
HERC1-206ENST00000559996 WDR11Q9BZH6 1224 aa10.66□□□□□ -0.7
HERC1-206ENST00000559996 BCAS3Q9H6U6 928 aa10.66□□□□□ -0.7
HERC1-206ENST00000559996 KCNMB3Q9NPA1 279 aa10.66□□□□□ -0.7
HERC1-206ENST00000559996 JADE2Q9NQC1 790 aa10.66□□□□□ -0.7
HERC1-206ENST00000559996 LRRC37A2A6NM11 1700 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 TNPO2O14787 897 aaKnown RBP10.65□□□□□ -0.7
HERC1-206ENST00000559996 MSH4O15457 936 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 FKTNO75072 461 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 ATP9AO75110 1047 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 YEATS4O95619 227 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 ICAM3P32942 547 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 FCGRTP55899 365 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 SP2Q02086 613 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 ORC2Q13416 577 aaPredicted RBP10.65□□□□□ -0.7
HERC1-206ENST00000559996 TMEM63BQ5T3F8 832 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 TAPT1Q6NXT6 567 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 XRRA1Q6P2D8 792 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 B3GNT9Q6UX72 402 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 NIPA1Q7RTP0 329 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 TMEM87AQ8NBN3 555 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 ZNF396Q96N95 335 aaPredicted RBP10.65□□□□□ -0.7
HERC1-206ENST00000559996 NUDT12Q9BQG2 462 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 LMBRD1Q9NUN5 540 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 FBXO2Q9UK22 296 aaPredicted RBP10.65□□□□□ -0.7
HERC1-206ENST00000559996 NOL7Q9UMY1 257 aaKnown RBP10.65□□□□□ -0.7
HERC1-206ENST00000559996 PCDHA7Q9UN72 937 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 ATP6V1DQ9Y5K8 247 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 IVNS1ABPQ9Y6Y0 642 aa10.65□□□□□ -0.7
HERC1-206ENST00000559996 MCM3APO60318 1980 aa10.65□□□□□ -0.71
HERC1-206ENST00000559996 RBM47A0AV96 593 aaKnown RBP10.64□□□□□ -0.71
HERC1-206ENST00000559996 SPATA31C2B4DYI2 1134 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 SPTLC2O15270 562 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 PPP6R2O75170 966 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 GADD45BO75293 160 aaPredicted RBP10.64□□□□□ -0.71
HERC1-206ENST00000559996 EIF3JO75822 258 aaKnown RBP10.64□□□□□ -0.71
HERC1-206ENST00000559996 ARIH2O95376 493 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 MYCLP12524 364 aaPredicted RBP10.64□□□□□ -0.71
HERC1-206ENST00000559996 XRCC5P13010 732 aaKnown RBP10.64□□□□□ -0.71
HERC1-206ENST00000559996 GCFC2P16383 781 aaKnown RBP10.64□□□□□ -0.71
HERC1-206ENST00000559996 CYP2B6P20813 491 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 MARCKSP29966 332 aaPredicted RBP10.64□□□□□ -0.71
HERC1-206ENST00000559996 CCND2P30279 289 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 FLT3LGP49771 235 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 KRT85P78386 507 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 PRKCZQ05513 592 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 SPIRE1Q08AE8 756 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 STXBP2Q15833 593 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 PRR16Q569H4 304 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 ARMCX2Q7L311 632 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 DPP9Q86TI2 863 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 CLIC6Q96NY7 704 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 UIMC1Q96RL1 719 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 TINF2Q9BSI4 451 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 PDGFCQ9NRA1 345 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 KCNH7Q9NS40 1196 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 ADD3Q9UEY8 706 aaKnown RBP10.64□□□□□ -0.71
HERC1-206ENST00000559996 DDX25Q9UHL0 483 aaKnown RBP10.64□□□□□ -0.71
HERC1-206ENST00000559996 CFAP45Q9UL16 551 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 TELO2Q9Y4R8 837 aa10.64□□□□□ -0.71
HERC1-206ENST00000559996 SRPRBQ9Y5M8 271 aaKnown RBP10.64□□□□□ -0.71
HERC1-206ENST00000559996 KIAA1217Q5T5P2 1943 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 POTEB3A0JP26 581 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 ASB14A6NK59 587 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 TBX3O15119 743 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 PSMD10O75832 226 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 STAM2O75886 525 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 ZNF865P0CJ78 1059 aaPredicted RBP10.63□□□□□ -0.71
HERC1-206ENST00000559996 PRPHP41219 470 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 ITGB3BPQ13352 177 aaPredicted RBP10.63□□□□□ -0.71
HERC1-206ENST00000559996 IRF5Q13568 498 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 PRAMEF19Q5SWL8 479 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 ARL6IP4Q66PJ3 421 aaKnown RBP10.63□□□□□ -0.71
HERC1-206ENST00000559996 OLFML2BQ68BL8 750 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 CCDC62Q6P9F0 684 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 POTEBQ6S5H4 581 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 PLA2G4DQ86XP0 818 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 CCAR1Q8IX12 1150 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms