RNA–Protein interactions for RNA: ENST00000559538.1

MRPL46-204, Transcript of mitochondrial ribosomal protein L46, humanhuman

TSL 3

Gene MRPL46, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL46-204ENST00000559538 XIRP2A4UGR9 3374 aa11.07□□□□□ -0.64
MRPL46-204ENST00000559538 RBM47A0AV96 593 aaKnown RBP11.06□□□□□ -0.64
MRPL46-204ENST00000559538 A6NJR5 290 aa11.06□□□□□ -0.64
MRPL46-204ENST00000559538 CDKL5O76039 1030 aa11.06□□□□□ -0.64
MRPL46-204ENST00000559538 DDAH1O94760 285 aa11.06□□□□□ -0.64
MRPL46-204ENST00000559538 BAIAP3O94812 1187 aa11.06□□□□□ -0.64
MRPL46-204ENST00000559538 EVCP57679 992 aa11.06□□□□□ -0.64
MRPL46-204ENST00000559538 PTPN11Q06124 597 aaPredicted RBP11.06□□□□□ -0.64
MRPL46-204ENST00000559538 TRAF1Q13077 416 aa11.06□□□□□ -0.64
MRPL46-204ENST00000559538 BTNL9Q6UXG8 535 aa11.06□□□□□ -0.64
MRPL46-204ENST00000559538 SEPT14Q6ZU15 432 aa11.06□□□□□ -0.64
MRPL46-204ENST00000559538 DNERQ8NFT8 737 aa11.06□□□□□ -0.64
MRPL46-204ENST00000559538 LZTS2Q9BRK4 669 aa11.06□□□□□ -0.64
MRPL46-204ENST00000559538 PNMA2Q9UL42 364 aa11.06□□□□□ -0.64
MRPL46-204ENST00000559538 TRIP12Q14669 1992 aaPredicted RBP11.06□□□□□ -0.64
MRPL46-204ENST00000559538 SCN10AQ9Y5Y9 1956 aa11.06□□□□□ -0.64
MRPL46-204ENST00000559538 NEDD4P46934 1319 aa11.06□□□□□ -0.64
MRPL46-204ENST00000559538 PDHBP11177 359 aa11.05□□□□□ -0.64
MRPL46-204ENST00000559538 POU3F3P20264 500 aaPredicted RBP11.05□□□□□ -0.64
MRPL46-204ENST00000559538 NOVP48745 357 aa11.05□□□□□ -0.64
MRPL46-204ENST00000559538 GRB10Q13322 594 aa11.05□□□□□ -0.64
MRPL46-204ENST00000559538 ADCK5Q3MIX3 580 aa11.05□□□□□ -0.64
MRPL46-204ENST00000559538 Q6ZUG5 572 aa11.05□□□□□ -0.64
MRPL46-204ENST00000559538 TMCO2Q7Z6W1 182 aaPredicted RBP11.05□□□□□ -0.64
MRPL46-204ENST00000559538 CAGE1Q8TC20 777 aa11.05□□□□□ -0.64
MRPL46-204ENST00000559538 AFAP1L1Q8TED9 768 aa11.05□□□□□ -0.64
MRPL46-204ENST00000559538 GDPD5Q8WTR4 605 aa11.05□□□□□ -0.64
MRPL46-204ENST00000559538 CLEC4DQ8WXI8 215 aa11.05□□□□□ -0.64
MRPL46-204ENST00000559538 EPHX3Q9H6B9 360 aa11.05□□□□□ -0.64
MRPL46-204ENST00000559538 RBM28Q9NW13 759 aaKnown RBP11.05□□□□□ -0.64
MRPL46-204ENST00000559538 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.05□□□□□ -0.64
MRPL46-204ENST00000559538 PTPRSQ13332 1948 aa11.05□□□□□ -0.64
MRPL46-204ENST00000559538 REV3LO60673 3130 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 PRRC2BQ5JSZ5 2229 aaKnown RBP11.04□□□□□ -0.64
MRPL46-204ENST00000559538 SH2B2O14492 632 aaPredicted RBP11.04□□□□□ -0.64
MRPL46-204ENST00000559538 ARHGEF15O94989 841 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 GH1P01241 217 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 HSP90AA1P07900 732 aaKnown RBP11.04□□□□□ -0.64
MRPL46-204ENST00000559538 GOLGA8HP0CJ92 632 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 SELPP16109 830 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 SMARCA1P28370 1054 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 WDR5P61964 334 aaKnown RBP11.04□□□□□ -0.64
MRPL46-204ENST00000559538 ZNF543Q08ER8 600 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 LY6KQ17RY6 165 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 TMEM31Q5JXX7 168 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 GPATCH4Q5T3I0 446 aaKnown RBP11.04□□□□□ -0.64
MRPL46-204ENST00000559538 STOX1Q6ZVD7 989 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 SPRED2Q7Z698 418 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 FAM177A1Q8N128 213 aaPredicted RBP11.04□□□□□ -0.64
MRPL46-204ENST00000559538 C7orf31Q8N865 590 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 CTCFLQ8NI51 663 aaPredicted RBP11.04□□□□□ -0.64
MRPL46-204ENST00000559538 IGDCC4Q8TDY8 1250 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 AFG1LQ8WV93 481 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 KIF2CQ99661 725 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 ALG1Q9BT22 464 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 LRFN3Q9BTN0 628 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 UPF3BQ9BZI7 483 aaKnown RBP11.04□□□□□ -0.64
MRPL46-204ENST00000559538 CHD7Q9P2D1 2997 aa11.04□□□□□ -0.64
MRPL46-204ENST00000559538 LCHNA4D1U4 455 aa11.03□□□□□ -0.64
MRPL46-204ENST00000559538 K7ELQ4 463 aaPredicted RBP11.03□□□□□ -0.64
MRPL46-204ENST00000559538 ZBTB43O43298 467 aa11.03□□□□□ -0.64
MRPL46-204ENST00000559538 ARIH2O95376 493 aa11.03□□□□□ -0.64
MRPL46-204ENST00000559538 MMP3P08254 477 aa11.03□□□□□ -0.64
MRPL46-204ENST00000559538 EDNRBP24530 442 aa11.03□□□□□ -0.64
MRPL46-204ENST00000559538 STXBP2Q15833 593 aa11.03□□□□□ -0.64
MRPL46-204ENST00000559538 GDF6Q6KF10 455 aaPredicted RBP11.03□□□□□ -0.64
MRPL46-204ENST00000559538 FAM117BQ6P1L5 589 aa11.03□□□□□ -0.64
MRPL46-204ENST00000559538 CNKSR3Q6P9H4 555 aa11.03□□□□□ -0.64
MRPL46-204ENST00000559538 LRRC8DQ7L1W4 858 aa11.03□□□□□ -0.64
MRPL46-204ENST00000559538 TEX2Q8IWB9 1127 aa11.03□□□□□ -0.64
MRPL46-204ENST00000559538 ENAHQ8N8S7 591 aaPredicted RBP11.03□□□□□ -0.64
MRPL46-204ENST00000559538 RGS22Q8NE09 1264 aa11.03□□□□□ -0.64
MRPL46-204ENST00000559538 BRF1Q92994 677 aa11.03□□□□□ -0.64
MRPL46-204ENST00000559538 INTS4Q96HW7 963 aaKnown RBP11.03□□□□□ -0.64
MRPL46-204ENST00000559538 ZKSCAN3Q9BRR0 538 aa11.03□□□□□ -0.64
MRPL46-204ENST00000559538 LLPHQ9BRT6 129 aaKnown RBP11.03□□□□□ -0.64
MRPL46-204ENST00000559538 SLKQ9H2G2 1235 aaPredicted RBP11.03□□□□□ -0.64
MRPL46-204ENST00000559538 CPVLQ9H3G5 476 aa11.03□□□□□ -0.64
MRPL46-204ENST00000559538 MYH6P13533 1939 aa11.03□□□□□ -0.64
MRPL46-204ENST00000559538 KIAA1217Q5T5P2 1943 aa11.03□□□□□ -0.64
MRPL46-204ENST00000559538 FAM86C2PA6NEL3 165 aa11.02□□□□□ -0.65
MRPL46-204ENST00000559538 CPLX1O14810 134 aa11.02□□□□□ -0.65
MRPL46-204ENST00000559538 PARNO95453 639 aaKnown RBP11.02□□□□□ -0.65
MRPL46-204ENST00000559538 AK2P54819 239 aa11.02□□□□□ -0.65
MRPL46-204ENST00000559538 DEFB103AP81534 67 aa11.02□□□□□ -0.65
MRPL46-204ENST00000559538 HMGN5P82970 282 aaKnown RBP11.02□□□□□ -0.65
MRPL46-204ENST00000559538 IKBKEQ14164 716 aa11.02□□□□□ -0.65
MRPL46-204ENST00000559538 SEC23AQ15436 765 aa11.02□□□□□ -0.65
MRPL46-204ENST00000559538 CDC37Q16543 378 aaPredicted RBP11.02□□□□□ -0.65
MRPL46-204ENST00000559538 DGKDQ16760 1214 aa11.02□□□□□ -0.65
MRPL46-204ENST00000559538 ASPRV1Q53RT3 343 aa11.02□□□□□ -0.65
MRPL46-204ENST00000559538 ARHGEF16Q5VV41 709 aa11.02□□□□□ -0.65
MRPL46-204ENST00000559538 CYB5R4Q7L1T6 521 aa11.02□□□□□ -0.65
MRPL46-204ENST00000559538 DHX37Q8IY37 1157 aaKnown RBP11.02□□□□□ -0.65
MRPL46-204ENST00000559538 PNMA1Q8ND90 353 aa11.02□□□□□ -0.65
MRPL46-204ENST00000559538 NSUN6Q8TEA1 469 aaKnown RBP11.02□□□□□ -0.65
MRPL46-204ENST00000559538 WASF1Q92558 559 aa11.02□□□□□ -0.65
MRPL46-204ENST00000559538 TAAR1Q96RJ0 339 aa11.02□□□□□ -0.65
MRPL46-204ENST00000559538 UBA5Q9GZZ9 404 aa11.02□□□□□ -0.65
MRPL46-204ENST00000559538 LY9Q9HBG7 655 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms