RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 CIAPIN1Q6FI81 312 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 GUF1Q8N442 669 aaKnown RBP12.31□□□□□ -0.44
SPG11-217ENST00000559511 AMNQ9BXJ7 453 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 SHTN1A0MZ66 631 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 NDUFA10O95299 355 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 TRIM21P19474 475 aaKnown RBP12.31□□□□□ -0.44
SPG11-217ENST00000559511 STAT3P40763 770 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 COASYQ13057 564 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 LRRC41Q15345 812 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 SYDE2Q5VT97 1194 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 MBOAT7Q96N66 472 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 NAP1L4Q99733 375 aaKnown RBP12.31□□□□□ -0.44
SPG11-217ENST00000559511 TMEM39BQ9GZU3 492 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 PPP1R1BQ9UD71 204 aaPredicted RBP12.31□□□□□ -0.44
SPG11-217ENST00000559511 EPN1Q9Y6I3 576 aaPredicted RBP12.31□□□□□ -0.44
SPG11-217ENST00000559511 POTEB3A0JP26 581 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 POTECB2RU33 542 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 E9PMD0 336 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 WNT10BO00744 389 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 OPLAHO14841 1288 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 BMP3P12645 472 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 CLCN6P51797 869 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 ARHGAP4P98171 946 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 IKQ13123 557 aaPredicted RBP12.3□□□□□ -0.44
SPG11-217ENST00000559511 AP3B2Q13367 1082 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 NBPF9Q3BBW0 867 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 POTEBQ6S5H4 581 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 FAM83AQ86UY5 434 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 SPICE1Q8N0Z3 855 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 SLC35F6Q8N357 371 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 JDP2Q8WYK2 163 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 ERGIC2Q96RQ1 377 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 LRRC27Q9C0I9 530 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 EPC1Q9H2F5 836 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 PGAP2Q9UHJ9 254 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 KIAA1024Q9UPX6 916 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 KDM3AQ9Y4C1 1321 aa12.3□□□□□ -0.44
SPG11-217ENST00000559511 ECE1P42892 770 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 PSMD2Q13200 908 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 R3HDM1Q15032 1099 aaKnown RBP12.29□□□□□ -0.44
SPG11-217ENST00000559511 MEA1Q16626 185 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 LRRC55Q6ZSA7 311 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 FBXO11Q86XK2 927 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 ETNPPLQ8TBG4 499 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 SGIP1Q9BQI5 828 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 NUP58Q9BVL2 599 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 FGFBP2Q9BYJ0 223 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 NT5C3AQ9H0P0 336 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 OGFRQ9NZT2 677 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 TRIM10Q9UDY6 481 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 NPHP3-ACAD11A0A0J9YXS1 232 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 TBC1D12O60347 775 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 MED24O75448 989 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 SSBP05455 408 aaKnown RBP eCLIP12.29□□□□□ -0.44
SPG11-217ENST00000559511 HERVK_113P62684 666 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 LRRC63Q05C16 580 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 SPIRE1Q08AE8 756 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 VWA3BQ502W6 1294 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 PRR16Q569H4 304 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 KIAA1755Q5JYT7 1200 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 MOXD1Q6UVY6 613 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 BTNL9Q6UXG8 535 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 RSRC2Q7L4I2 434 aaKnown RBP12.29□□□□□ -0.44
SPG11-217ENST00000559511 RETREG2Q8NC44 543 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 ACER1Q8TDN7 264 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 UBE2Q2Q8WVN8 375 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 LENG9Q96B70 501 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 MYOZ2Q9NPC6 264 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 PANK4Q9NVE7 773 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 ZBTB21Q9ULJ3 1066 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 SYNPO2Q9UMS6 1093 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 TFR2Q9UP52 801 aa12.29□□□□□ -0.44
SPG11-217ENST00000559511 FAM86B1E9PN63 330 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 FAM86B2P0C5J1 330 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 PLA2G4BP0C869 781 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 ERCC3P19447 782 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 HOXA13P31271 388 aaPredicted RBP12.28□□□□□ -0.44
SPG11-217ENST00000559511 MMP14P50281 582 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 MIGA2Q7L4E1 593 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 SLFN12Q8IYM2 578 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 MYOCDQ8IZQ8 938 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 PCMTD1Q96MG8 357 aaPredicted RBP12.28□□□□□ -0.44
SPG11-217ENST00000559511 ARHGEF10LQ9HCE6 1279 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 TBC1D7Q9P0N9 293 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 TMX2Q9Y320 296 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 CTAGE9A4FU28 777 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 POTEFA5A3E0 1075 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 EPHB6O15197 1021 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 TFRCP02786 760 aaKnown RBP12.28□□□□□ -0.44
SPG11-217ENST00000559511 POTEIP0CG38 1075 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 SREBF1P36956 1147 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 ZBED6P86452 979 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 CACNB1Q02641 598 aaPredicted RBP12.28□□□□□ -0.44
SPG11-217ENST00000559511 TNIP1Q15025 636 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 Q4G0T1 1027 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 ZCWPW2Q504Y3 356 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 FIGNQ5HY92 759 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 FAM26FQ5R3K3 315 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 TEX35Q5T0J7 233 aa12.28□□□□□ -0.44
SPG11-217ENST00000559511 FKBP15Q5T1M5 1219 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms