RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TLR3O15455 904 aaKnown RBP15.12■□□□□ 0.01
SPG11-210ENST00000558319 ART3Q13508 389 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 SLFN13Q68D06 897 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 ANAPC5Q9UJX4 755 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 PCDHA7Q9UN72 937 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 GRIN2AQ12879 1464 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 PPEF1O14829 653 aaPredicted RBP15.12■□□□□ 0.01
SPG11-210ENST00000558319 ACTN1P12814 892 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 COPB1P53618 953 aaKnown RBP15.12■□□□□ 0.01
SPG11-210ENST00000558319 ELAC2Q9BQ52 826 aaKnown RBP15.12■□□□□ 0.01
SPG11-210ENST00000558319 ABCB6Q9NP58 842 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 TPCN1Q9ULQ1 816 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 ZNF711Q9Y462 761 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 PSDA5PKW4 1024 aaPredicted RBP15.12■□□□□ 0.01
SPG11-210ENST00000558319 A6NJR5 290 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 IL13P35225 146 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 CACNB3P54284 484 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 SAAL1Q96ER3 474 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 QTRT2Q9H974 415 aaKnown RBP15.12■□□□□ 0.01
SPG11-210ENST00000558319 DHX9Q08211 1270 aaKnown RBP15.12■□□□□ 0.01
SPG11-210ENST00000558319 MTERF2Q49AM1 385 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 TTLL11Q8NHH1 800 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 CACTINQ8WUQ7 758 aaKnown RBP15.12■□□□□ 0.01
SPG11-210ENST00000558319 DYNLL2Q96FJ2 89 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 CCDC68Q9H2F9 335 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 FAM8A1Q9UBU6 413 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 ASAP1Q9ULH1 1129 aa15.12■□□□□ 0.01
SPG11-210ENST00000558319 MYO1CO00159 1063 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 CHURC1Q8WUH1 139 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 ASXL2Q76L83 1435 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 NR1D1P20393 614 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 TRAPPC10P48553 1259 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 PMS1P54277 932 aaKnown RBP15.11■□□□□ 0.01
SPG11-210ENST00000558319 TFAMQ00059 246 aaKnown RBP15.11■□□□□ 0.01
SPG11-210ENST00000558319 FBXO38Q6PIJ6 1188 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 EIF4G3O43432 1585 aaKnown RBP15.11■□□□□ 0.01
SPG11-210ENST00000558319 PRKAB2O43741 272 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 ESRRAP11474 423 aaPredicted RBP15.11■□□□□ 0.01
SPG11-210ENST00000558319 DAB2P98082 770 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 MYL7Q01449 175 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 ERFEQ4G0M1 354 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 PI16Q6UXB8 463 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 ZNF577Q9BSK1 485 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 FTOQ9C0B1 505 aaKnown RBP eCLIP15.11■□□□□ 0.01
SPG11-210ENST00000558319 LOC102724159A0A0B4J2E5 919 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 DDIT3P35638 169 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 STX1BP61266 288 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 PWP2Q15269 919 aaKnown RBP15.11■□□□□ 0.01
SPG11-210ENST00000558319 C11orf57Q6ZUT1 292 aaPredicted RBP15.11■□□□□ 0.01
SPG11-210ENST00000558319 ACTR5Q9H9F9 607 aaPredicted RBP15.11■□□□□ 0.01
SPG11-210ENST00000558319 HESX1Q9UBX0 185 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 GOLGA8CPA6NN73 597 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 NVLO15381 856 aaKnown RBP15.11■□□□□ 0.01
SPG11-210ENST00000558319 H2AFZP0C0S5 128 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 KIAA1841Q6NSI8 718 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 ANGPTL8Q6UXH0 198 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 H2AFVQ71UI9 128 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 POLR3CQ9BUI4 534 aaPredicted RBP15.11■□□□□ 0.01
SPG11-210ENST00000558319 AP1M1Q9BXS5 423 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 DAAM1Q9Y4D1 1078 aa15.11■□□□□ 0.01
SPG11-210ENST00000558319 RPRD2Q5VT52 1461 aaKnown RBP15.1■□□□□ 0.01
SPG11-210ENST00000558319 LONP1P36776 959 aaKnown RBP15.1■□□□□ 0.01
SPG11-210ENST00000558319 CASP8Q14790 479 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 SMYD3Q9H7B4 428 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 IBTKQ9P2D0 1353 aaPredicted RBP15.1■□□□□ 0.01
SPG11-210ENST00000558319 HNRNPDLO14979 420 aaKnown RBP15.1■□□□□ 0.01
SPG11-210ENST00000558319 MYL3P08590 195 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 PCYT1AP49585 367 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 PTGDRQ13258 359 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 SPATA1Q5VX52 437 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 ICE2Q659A1 982 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 CNOT6LQ96LI5 555 aaKnown RBP15.1■□□□□ 0.01
SPG11-210ENST00000558319 SUFUQ9UMX1 484 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 MTMR6Q9Y217 621 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 ODR4Q5SWX8 454 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 HSPH1Q92598 858 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 SLITRK6Q9H5Y7 841 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 ARMCX3Q9UH62 379 aaPredicted RBP15.1■□□□□ 0.01
SPG11-210ENST00000558319 PPP2R5EQ16537 467 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 SLFNL1Q499Z3 407 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 CDKL2Q92772 493 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 GSPT1P15170 499 aaKnown RBP15.1■□□□□ 0.01
SPG11-210ENST00000558319 MAGEA9P43362 315 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 ARHGEF18Q6ZSZ5 1173 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 ZNF513Q8N8E2 541 aaPredicted RBP15.1■□□□□ 0.01
SPG11-210ENST00000558319 NOP53Q9NZM5 478 aaKnown RBP15.1■□□□□ 0.01
SPG11-210ENST00000558319 ARPP21Q9UBL0 812 aaPredicted RBP15.1■□□□□ 0.01
SPG11-210ENST00000558319 PCDHA1Q9Y5I3 950 aa15.1■□□□□ 0.01
SPG11-210ENST00000558319 PROSER3Q2NL68 480 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 MUM1L1Q5H9M0 696 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 EXOC4Q96A65 974 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 ZCWPW1Q9H0M4 648 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 TRPC5Q9UL62 973 aaPredicted RBP15.09■□□□□ 0.01
SPG11-210ENST00000558319 TRAIPQ9BWF2 469 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 FAM49AQ9H0Q0 323 aaPredicted RBP15.09■□□□□ 0.01
SPG11-210ENST00000558319 EIF3CLB5ME19 914 aaKnown RBP15.09■□□□□ 0.01
SPG11-210ENST00000558319 EIF3CQ99613 913 aaKnown RBP15.09■□□□□ 0.01
SPG11-210ENST00000558319 MCF2P10911 925 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 RAPGEF5Q92565 580 aa15.09■□□□□ 0.01
SPG11-210ENST00000558319 PACSIN2Q9UNF0 486 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms